RNA–Protein interactions for RNA: ENST00000592771.5

RANBP3-229, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 1,937 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-229ENST00000592771 Q8TCH9 128 aa11.82□□□□□ -0.52
RANBP3-229ENST00000592771 RNASEH2CQ8TDP1 164 aaKnown RBP11.82□□□□□ -0.52
RANBP3-229ENST00000592771 RND1Q92730 232 aa11.82□□□□□ -0.52
RANBP3-229ENST00000592771 RAB1CQ92928 201 aa11.82□□□□□ -0.52
RANBP3-229ENST00000592771 TXNDC17Q9BRA2 123 aa11.82□□□□□ -0.52
RANBP3-229ENST00000592771 NPCDR1Q9BY65 106 aa11.82□□□□□ -0.52
RANBP3-229ENST00000592771 POLEQ07864 2286 aa11.82□□□□□ -0.52
RANBP3-229ENST00000592771 DSCAMO60469 2012 aa11.81□□□□□ -0.52
RANBP3-229ENST00000592771 MGST3O14880 152 aa11.81□□□□□ -0.52
RANBP3-229ENST00000592771 MPDU1O75352 247 aa11.81□□□□□ -0.52
RANBP3-229ENST00000592771 S1PR2O95136 353 aa11.81□□□□□ -0.52
RANBP3-229ENST00000592771 SRP14P37108 136 aaKnown RBP11.81□□□□□ -0.52
RANBP3-229ENST00000592771 FAM3BP58499 235 aaPredicted RBP11.81□□□□□ -0.52
RANBP3-229ENST00000592771 ZNF816Q0VGE8 651 aaPredicted RBP11.81□□□□□ -0.52
RANBP3-229ENST00000592771 WFDC8Q8IUA0 241 aa11.81□□□□□ -0.52
RANBP3-229ENST00000592771 OR52L2PQ8NGH6 319 aa11.81□□□□□ -0.52
RANBP3-229ENST00000592771 OR4X1Q8NH49 305 aa11.81□□□□□ -0.52
RANBP3-229ENST00000592771 PPP1R35Q8TAP8 253 aa11.81□□□□□ -0.52
RANBP3-229ENST00000592771 NEIL1Q96FI4 390 aaPredicted RBP11.81□□□□□ -0.52
RANBP3-229ENST00000592771 ACY3Q96HD9 319 aa11.81□□□□□ -0.52
RANBP3-229ENST00000592771 PARLQ9H300 379 aa11.81□□□□□ -0.52
RANBP3-229ENST00000592771 NCOR1P1Q9H4R4 102 aa11.81□□□□□ -0.52
RANBP3-229ENST00000592771 USF3Q68DE3 2245 aa11.8□□□□□ -0.52
RANBP3-229ENST00000592771 DVL1O14640 695 aa11.8□□□□□ -0.52
RANBP3-229ENST00000592771 HRASP01112 189 aa11.8□□□□□ -0.52
RANBP3-229ENST00000592771 TYMSP04818 313 aa11.8□□□□□ -0.52
RANBP3-229ENST00000592771 CD99P14209 185 aa11.8□□□□□ -0.52
RANBP3-229ENST00000592771 SSTR5P35346 364 aa11.8□□□□□ -0.52
RANBP3-229ENST00000592771 TNFAIP6P98066 277 aaPredicted RBP11.8□□□□□ -0.52
RANBP3-229ENST00000592771 LINC00469Q8N7U9 141 aa11.8□□□□□ -0.52
RANBP3-229ENST00000592771 RAB24Q969Q5 203 aa11.8□□□□□ -0.52
RANBP3-229ENST00000592771 C5orf30Q96GV9 206 aa11.8□□□□□ -0.52
RANBP3-229ENST00000592771 PRDM13Q9H4Q3 707 aa11.8□□□□□ -0.52
RANBP3-229ENST00000592771 GCM1Q9NP62 436 aa11.8□□□□□ -0.52
RANBP3-229ENST00000592771 RNF7Q9UBF6 113 aa11.8□□□□□ -0.52
RANBP3-229ENST00000592771 CLN8Q9UBY8 286 aa11.8□□□□□ -0.52
RANBP3-229ENST00000592771 IGHV3OR15-7A0A075B7D8 119 aa11.8□□□□□ -0.52
RANBP3-229ENST00000592771 C17orf98A8MV24 154 aa11.8□□□□□ -0.52
RANBP3-229ENST00000592771 PPP5D1E7EU14 171 aa11.8□□□□□ -0.52
RANBP3-229ENST00000592771 SPINT2O43291 252 aa11.8□□□□□ -0.52
RANBP3-229ENST00000592771 PDE6DO43924 150 aa11.8□□□□□ -0.52
RANBP3-229ENST00000592771 ZG16O60844 167 aa11.8□□□□□ -0.52
RANBP3-229ENST00000592771 GALR1P47211 349 aa11.8□□□□□ -0.52
RANBP3-229ENST00000592771 BRWD1-AS2P59051 145 aa11.8□□□□□ -0.52
RANBP3-229ENST00000592771 PKIAP61925 76 aa11.8□□□□□ -0.52
RANBP3-229ENST00000592771 DEFA6Q01524 100 aa11.8□□□□□ -0.52
RANBP3-229ENST00000592771 BSPH1Q075Z2 132 aa11.8□□□□□ -0.52
RANBP3-229ENST00000592771 TPRX1Q8N7U7 411 aa11.8□□□□□ -0.52
RANBP3-229ENST00000592771 PACRGQ96M98 296 aaPredicted RBP11.8□□□□□ -0.52
RANBP3-229ENST00000592771 SSX3Q99909 188 aa11.8□□□□□ -0.52
RANBP3-229ENST00000592771 SLC25A22Q9H936 323 aa11.8□□□□□ -0.52
RANBP3-229ENST00000592771 DSCAML1Q8TD84 2053 aa11.79□□□□□ -0.52
RANBP3-229ENST00000592771 GGCTO75223 188 aaKnown RBP11.79□□□□□ -0.52
RANBP3-229ENST00000592771 CD55P08174 381 aa11.79□□□□□ -0.52
RANBP3-229ENST00000592771 FABP4P15090 132 aa11.79□□□□□ -0.52
RANBP3-229ENST00000592771 TNFSF4P23510 183 aa11.79□□□□□ -0.52
RANBP3-229ENST00000592771 ADIPOQQ15848 244 aa11.79□□□□□ -0.52
RANBP3-229ENST00000592771 GFI1BQ5VTD9 330 aa11.79□□□□□ -0.52
RANBP3-229ENST00000592771 FAM53AQ6NSI3 398 aaPredicted RBP11.79□□□□□ -0.52
RANBP3-229ENST00000592771 ZNF808Q8N4W9 903 aaPredicted RBP11.79□□□□□ -0.52
RANBP3-229ENST00000592771 OR4F5Q8NH21 305 aa11.79□□□□□ -0.52
RANBP3-229ENST00000592771 OR52E5Q8NH55 327 aa11.79□□□□□ -0.52
RANBP3-229ENST00000592771 RPUSD4Q96CM3 377 aaKnown RBP11.79□□□□□ -0.52
RANBP3-229ENST00000592771 OR4F4Q96R69 305 aa11.79□□□□□ -0.52
RANBP3-229ENST00000592771 IMMP2LQ96T52 175 aa11.79□□□□□ -0.52
RANBP3-229ENST00000592771 HIST1H2BLQ99880 126 aa11.79□□□□□ -0.52
RANBP3-229ENST00000592771 DCTN5Q9BTE1 182 aa11.79□□□□□ -0.52
RANBP3-229ENST00000592771 GZMHP20718 246 aa11.78□□□□□ -0.52
RANBP3-229ENST00000592771 CDC34P49427 236 aaPredicted RBP11.78□□□□□ -0.52
RANBP3-229ENST00000592771 LCN2P80188 198 aa11.78□□□□□ -0.52
RANBP3-229ENST00000592771 PDLIM3Q53GG5 364 aaPredicted RBP11.78□□□□□ -0.52
RANBP3-229ENST00000592771 STUMQ69YW2 141 aa11.78□□□□□ -0.52
RANBP3-229ENST00000592771 KCNIP4Q6PIL6 250 aa11.78□□□□□ -0.52
RANBP3-229ENST00000592771 TMEM170AQ8WVE7 144 aa11.78□□□□□ -0.52
RANBP3-229ENST00000592771 SDSLQ96GA7 329 aa11.78□□□□□ -0.52
RANBP3-229ENST00000592771 CHODLQ9H9P2 273 aa11.78□□□□□ -0.52
RANBP3-229ENST00000592771 WDR83OSQ9Y284 106 aa11.78□□□□□ -0.52
RANBP3-229ENST00000592771 TPRP12270 2363 aaKnown RBP11.78□□□□□ -0.52
RANBP3-229ENST00000592771 F6UZH7 168 aa11.78□□□□□ -0.52
RANBP3-229ENST00000592771 TMPRSS2O15393 492 aa11.78□□□□□ -0.52
RANBP3-229ENST00000592771 RBFOX2O43251 390 aaKnown RBP eCLIP11.78□□□□□ -0.521e-6■■■■□ 23.9
RANBP3-229ENST00000592771 HPRT1P00492 218 aa11.78□□□□□ -0.52
RANBP3-229ENST00000592771 GYPAP02724 150 aa11.78□□□□□ -0.52
RANBP3-229ENST00000592771 PDLIM4P50479 330 aa11.78□□□□□ -0.52
RANBP3-229ENST00000592771 EDDM3AQ14507 147 aa11.78□□□□□ -0.52
RANBP3-229ENST00000592771 OR1P1Q8NH06 330 aa11.78□□□□□ -0.52
RANBP3-229ENST00000592771 DYSFO75923 2080 aa11.77□□□□□ -0.52
RANBP3-229ENST00000592771 SPTA1P02549 2419 aa11.77□□□□□ -0.53
RANBP3-229ENST00000592771 MARCH11A6NNE9 402 aa11.77□□□□□ -0.53
RANBP3-229ENST00000592771 TSTD3H0UI37 97 aa11.77□□□□□ -0.53
RANBP3-229ENST00000592771 F2RL2O00254 374 aa11.77□□□□□ -0.53
RANBP3-229ENST00000592771 OR4A8P0C604 315 aa11.77□□□□□ -0.53
RANBP3-229ENST00000592771 CGB3P0DN86 165 aa11.77□□□□□ -0.53
RANBP3-229ENST00000592771 CGB7P0DN87 165 aa11.77□□□□□ -0.53
RANBP3-229ENST00000592771 SPCS3P61009 180 aa11.77□□□□□ -0.53
RANBP3-229ENST00000592771 TFF3Q07654 80 aa11.77□□□□□ -0.53
RANBP3-229ENST00000592771 KLRB1Q12918 225 aa11.77□□□□□ -0.53
RANBP3-229ENST00000592771 JOSD1Q15040 202 aaPredicted RBP11.77□□□□□ -0.53
RANBP3-229ENST00000592771 FAM201AQ5SY85 155 aa11.77□□□□□ -0.53
RANBP3-229ENST00000592771 ZNRF1Q8ND25 227 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms