RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 RND2P52198 227 aa13.63□□□□□ -0.23
PRKCSH-217ENST00000592741 KIAA0141Q14154 515 aaPredicted RBP13.63□□□□□ -0.23
PRKCSH-217ENST00000592741 OR4A47Q6IF82 309 aa13.63□□□□□ -0.23
PRKCSH-217ENST00000592741 ZNF383Q8NA42 475 aa13.63□□□□□ -0.23
PRKCSH-217ENST00000592741 OR4F5Q8NH21 305 aa13.63□□□□□ -0.23
PRKCSH-217ENST00000592741 OR4F4Q96R69 305 aa13.63□□□□□ -0.23
PRKCSH-217ENST00000592741 DPRXA6NFQ7 191 aa13.63□□□□□ -0.23
PRKCSH-217ENST00000592741 HRASP01112 189 aa13.63□□□□□ -0.23
PRKCSH-217ENST00000592741 OR4A8P0C604 315 aa13.63□□□□□ -0.23
PRKCSH-217ENST00000592741 OPRK1P41145 380 aa13.63□□□□□ -0.23
PRKCSH-217ENST00000592741 TMPRSS3P57727 454 aa13.63□□□□□ -0.23
PRKCSH-217ENST00000592741 CCL8P80075 99 aa13.63□□□□□ -0.23
PRKCSH-217ENST00000592741 TMEM241Q24JQ0 296 aa13.63□□□□□ -0.23
PRKCSH-217ENST00000592741 TGIF2LYQ8IUE0 185 aa13.63□□□□□ -0.23
PRKCSH-217ENST00000592741 GATAD1Q8WUU5 269 aa13.63□□□□□ -0.23
PRKCSH-217ENST00000592741 RPUSD4Q96CM3 377 aaKnown RBP13.63□□□□□ -0.23
PRKCSH-217ENST00000592741 TCEAL7Q9BRU2 100 aa13.63□□□□□ -0.23
PRKCSH-217ENST00000592741 ENY2Q9NPA8 101 aa13.63□□□□□ -0.23
PRKCSH-217ENST00000592741 DCAF16Q9NXF7 216 aa13.63□□□□□ -0.23
PRKCSH-217ENST00000592741 RPUSD1Q9UJJ7 312 aaKnown RBP13.63□□□□□ -0.23
PRKCSH-217ENST00000592741 C17orf100A8MU93 164 aa13.62□□□□□ -0.23
PRKCSH-217ENST00000592741 PRSS46E5RG02 174 aa13.62□□□□□ -0.23
PRKCSH-217ENST00000592741 S100A9P06702 114 aaKnown RBP13.62□□□□□ -0.23
PRKCSH-217ENST00000592741 NDUFB7P17568 137 aa13.62□□□□□ -0.23
PRKCSH-217ENST00000592741 BSPH1Q075Z2 132 aa13.62□□□□□ -0.23
PRKCSH-217ENST00000592741 ADIRFQ15847 76 aa13.62□□□□□ -0.23
PRKCSH-217ENST00000592741 ADIPOQQ15848 244 aa13.62□□□□□ -0.23
PRKCSH-217ENST00000592741 TREML4Q6UXN2 200 aa13.62□□□□□ -0.23
PRKCSH-217ENST00000592741 SSX8Q7RTT4 187 aa13.62□□□□□ -0.23
PRKCSH-217ENST00000592741 ABHD12Q8N2K0 398 aa13.62□□□□□ -0.23
PRKCSH-217ENST00000592741 TMEM14BQ9NUH8 114 aa13.62□□□□□ -0.23
PRKCSH-217ENST00000592741 SH3BGRL2Q9UJC5 107 aa13.62□□□□□ -0.23
PRKCSH-217ENST00000592741 DYSFO75923 2080 aa13.62□□□□□ -0.23
PRKCSH-217ENST00000592741 ZNF292O60281 2723 aa13.62□□□□□ -0.23
PRKCSH-217ENST00000592741 PAGE4O60829 102 aa13.61□□□□□ -0.23
PRKCSH-217ENST00000592741 SMIM6P0DI80 62 aa13.61□□□□□ -0.23
PRKCSH-217ENST00000592741 HSPE1P61604 102 aaKnown RBP13.61□□□□□ -0.23
PRKCSH-217ENST00000592741 Q8NA96 180 aa13.61□□□□□ -0.23
PRKCSH-217ENST00000592741 RAB1CQ92928 201 aa13.61□□□□□ -0.23
PRKCSH-217ENST00000592741 MS4A5Q9H3V2 200 aa13.61□□□□□ -0.23
PRKCSH-217ENST00000592741 LINC00312Q9Y6C7 94 aa13.61□□□□□ -0.23
PRKCSH-217ENST00000592741 TRAV38-1A0A0B4J264 116 aa13.61□□□□□ -0.23
PRKCSH-217ENST00000592741 A0A1W2PPV4 95 aa13.61□□□□□ -0.23
PRKCSH-217ENST00000592741 TMPRSS2O15393 492 aa13.61□□□□□ -0.23
PRKCSH-217ENST00000592741 MMP23AO75900 390 aa13.61□□□□□ -0.23
PRKCSH-217ENST00000592741 OPN1MWP04001 364 aa13.61□□□□□ -0.23
PRKCSH-217ENST00000592741 THBDP07204 575 aa13.61□□□□□ -0.23
PRKCSH-217ENST00000592741 OPN1MW2P0DN77 364 aa13.61□□□□□ -0.23
PRKCSH-217ENST00000592741 OPN1MW3P0DN78 364 aa13.61□□□□□ -0.23
PRKCSH-217ENST00000592741 POU2AF1Q16633 256 aa13.61□□□□□ -0.23
PRKCSH-217ENST00000592741 TMEM249Q2WGJ8 235 aa13.61□□□□□ -0.23
PRKCSH-217ENST00000592741 SLC25A48Q6ZT89 311 aaKnown RBP13.61□□□□□ -0.23
PRKCSH-217ENST00000592741 OR13D1Q8NGV5 346 aa13.61□□□□□ -0.23
PRKCSH-217ENST00000592741 TMEM170AQ8WVE7 144 aa13.61□□□□□ -0.23
PRKCSH-217ENST00000592741 NEIL1Q96FI4 390 aaPredicted RBP13.61□□□□□ -0.23
PRKCSH-217ENST00000592741 FAM210BQ96KR6 192 aa13.61□□□□□ -0.23
PRKCSH-217ENST00000592741 PARLQ9H300 379 aa13.61□□□□□ -0.23
PRKCSH-217ENST00000592741 KCNIP2Q9NS61 270 aa13.61□□□□□ -0.23
PRKCSH-217ENST00000592741 JKAMPQ9P055 326 aa13.61□□□□□ -0.23
PRKCSH-217ENST00000592741 DEFA4P12838 97 aa13.6□□□□□ -0.23
PRKCSH-217ENST00000592741 NPY1RP25929 384 aa13.6□□□□□ -0.23
PRKCSH-217ENST00000592741 RTL8BQ17RB0 113 aa13.6□□□□□ -0.23
PRKCSH-217ENST00000592741 SLC24A4Q8NFF2 622 aa13.6□□□□□ -0.23
PRKCSH-217ENST00000592741 ZCCHC14Q8WYQ9 949 aaKnown RBP13.6□□□□□ -0.23
PRKCSH-217ENST00000592741 MGST2Q99735 147 aa13.6□□□□□ -0.23
PRKCSH-217ENST00000592741 GAL3ST2Q9H3Q3 398 aa13.6□□□□□ -0.23
PRKCSH-217ENST00000592741 SLC25A10Q9UBX3 287 aaPredicted RBP13.6□□□□□ -0.23
PRKCSH-217ENST00000592741 TET2Q6N021 2002 aaPredicted RBP13.6□□□□□ -0.23
PRKCSH-217ENST00000592741 TGOLN2O43493 480 aa13.6□□□□□ -0.23
PRKCSH-217ENST00000592741 GCSAMLQ5JQS6 135 aa13.6□□□□□ -0.23
PRKCSH-217ENST00000592741 OR10A7Q8NGE5 316 aa13.6□□□□□ -0.23
PRKCSH-217ENST00000592741 GGTLC1Q9BX51 225 aa13.6□□□□□ -0.23
PRKCSH-217ENST00000592741 PRNDQ9UKY0 176 aa13.6□□□□□ -0.23
PRKCSH-217ENST00000592741 ZNF835Q9Y2P0 537 aa13.6□□□□□ -0.23
PRKCSH-217ENST00000592741 OR51B2Q9Y5P1 312 aa13.6□□□□□ -0.23
PRKCSH-217ENST00000592741 PXMP4Q9Y6I8 212 aa13.6□□□□□ -0.23
PRKCSH-217ENST00000592741 C11orf94C9JXX5 98 aa13.59□□□□□ -0.23
PRKCSH-217ENST00000592741 RPL23P62829 140 aaKnown RBP13.59□□□□□ -0.23
PRKCSH-217ENST00000592741 MEF2CQ06413 473 aaPredicted RBP13.59□□□□□ -0.23
PRKCSH-217ENST00000592741 BSXQ3C1V8 233 aa13.59□□□□□ -0.23
PRKCSH-217ENST00000592741 SNRNP40Q96DI7 357 aaKnown RBP13.59□□□□□ -0.23
PRKCSH-217ENST00000592741 SAP30LQ9HAJ7 183 aa13.59□□□□□ -0.23
PRKCSH-217ENST00000592741 NPVFQ9HCQ7 196 aa13.59□□□□□ -0.23
PRKCSH-217ENST00000592741 SLC35D1Q9NTN3 355 aa13.59□□□□□ -0.23
PRKCSH-217ENST00000592741 VSTM5A8MXK1 200 aa13.58□□□□□ -0.23
PRKCSH-217ENST00000592741 YIF1AO95070 293 aa13.58□□□□□ -0.23
PRKCSH-217ENST00000592741 CT45A6P0DMU7 189 aa13.58□□□□□ -0.23
PRKCSH-217ENST00000592741 CT45A5P0DMU8 189 aa13.58□□□□□ -0.23
PRKCSH-217ENST00000592741 CT45A7P0DMV0 189 aa13.58□□□□□ -0.23
PRKCSH-217ENST00000592741 SSUH2Q9Y2M2 353 aa13.58□□□□□ -0.23
PRKCSH-217ENST00000592741 TBR1Q16650 682 aa13.58□□□□□ -0.24
PRKCSH-217ENST00000592741 MIC13Q5XKP0 118 aa13.58□□□□□ -0.24
PRKCSH-217ENST00000592741 C16orf82Q7Z2V1 217 aa13.58□□□□□ -0.24
PRKCSH-217ENST00000592741 SPACA3Q8IXA5 215 aa13.58□□□□□ -0.24
PRKCSH-217ENST00000592741 SSX3Q99909 188 aa13.58□□□□□ -0.24
PRKCSH-217ENST00000592741 PATZ1Q9HBE1 687 aaKnown RBP13.58□□□□□ -0.24
PRKCSH-217ENST00000592741 TRBV24-1A0A075B6N3 115 aa13.57□□□□□ -0.24
PRKCSH-217ENST00000592741 PPIAL4EA0A075B759 164 aa13.57□□□□□ -0.24
PRKCSH-217ENST00000592741 PPIAL4DF5H284 164 aa13.57□□□□□ -0.24
PRKCSH-217ENST00000592741 PPIAL4FP0DN26 164 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms