RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 HIGD1AQ9Y241 93 aa10.8□□□□□ -0.68
DNMT1-228ENST00000592705 ZFHX2Q9C0A1 2572 aaPredicted RBP10.8□□□□□ -0.68
DNMT1-228ENST00000592705 IGLV3-12A0A075B6K2 115 aa10.8□□□□□ -0.68
DNMT1-228ENST00000592705 BMPR1BO00238 502 aa10.8□□□□□ -0.68
DNMT1-228ENST00000592705 ZIC3O60481 467 aa10.8□□□□□ -0.68
DNMT1-228ENST00000592705 IZUMO4Q1ZYL8 232 aa10.8□□□□□ -0.68
DNMT1-228ENST00000592705 SLC35E4Q6ICL7 350 aa10.8□□□□□ -0.68
DNMT1-228ENST00000592705 FAM89BQ8N5H3 189 aa10.8□□□□□ -0.68
DNMT1-228ENST00000592705 C1QTNF5Q9BXJ0 243 aa10.8□□□□□ -0.68
DNMT1-228ENST00000592705 RPRMQ9NS64 109 aa10.8□□□□□ -0.68
DNMT1-228ENST00000592705 CBLN4Q9NTU7 201 aa10.8□□□□□ -0.68
DNMT1-228ENST00000592705 CALYQ9NYX4 217 aa10.8□□□□□ -0.68
DNMT1-228ENST00000592705 AUP1Q9Y679 476 aa10.8□□□□□ -0.68
DNMT1-228ENST00000592705 SCN2AQ99250 2005 aa10.79□□□□□ -0.68
DNMT1-228ENST00000592705 IGHV3OR16-10A0A075B7F0 116 aa10.79□□□□□ -0.68
DNMT1-228ENST00000592705 A0A087WWC5 75 aa10.79□□□□□ -0.68
DNMT1-228ENST00000592705 VENTXO95231 258 aa10.79□□□□□ -0.68
DNMT1-228ENST00000592705 SRP19P09132 144 aaKnown RBP10.79□□□□□ -0.68
DNMT1-228ENST00000592705 PLA2G5P39877 138 aa10.79□□□□□ -0.68
DNMT1-228ENST00000592705 ID1P41134 155 aa10.79□□□□□ -0.68
DNMT1-228ENST00000592705 SP5Q6BEB4 398 aaPredicted RBP10.79□□□□□ -0.68
DNMT1-228ENST00000592705 GBF1Q92538 1859 aa10.79□□□□□ -0.68
DNMT1-228ENST00000592705 ARL14EPLP0DKL9 152 aa10.79□□□□□ -0.68
DNMT1-228ENST00000592705 PAQR4Q8N4S7 273 aaPredicted RBP10.79□□□□□ -0.68
DNMT1-228ENST00000592705 C1orf162Q8NEQ5 155 aaPredicted RBP10.79□□□□□ -0.68
DNMT1-228ENST00000592705 RCC1LQ96I51 464 aaKnown RBP10.79□□□□□ -0.68
DNMT1-228ENST00000592705 QTRT1Q9BXR0 403 aaKnown RBP10.79□□□□□ -0.68
DNMT1-228ENST00000592705 LRRC75BQ2VPJ9 315 aa10.79□□□□□ -0.68
DNMT1-228ENST00000592705 OR8I2Q8N0Y5 310 aa10.79□□□□□ -0.68
DNMT1-228ENST00000592705 C18orf12Q96KH6 178 aa10.79□□□□□ -0.68
DNMT1-228ENST00000592705 IGLV3-32A0A0A0MS00 114 aa10.79□□□□□ -0.68
DNMT1-228ENST00000592705 OR2T8A6NH00 312 aa10.79□□□□□ -0.68
DNMT1-228ENST00000592705 A8MWL6 223 aa10.79□□□□□ -0.68
DNMT1-228ENST00000592705 MC5RP33032 325 aa10.79□□□□□ -0.68
DNMT1-228ENST00000592705 COL5A1-AS1Q5SY13 56 aa10.79□□□□□ -0.68
DNMT1-228ENST00000592705 MRPL18Q9H0U6 180 aaKnown RBP10.79□□□□□ -0.68
DNMT1-228ENST00000592705 RALYQ9UKM9 306 aaKnown RBP10.79□□□□□ -0.68
DNMT1-228ENST00000592705 WASHC3Q9Y3C0 194 aa10.79□□□□□ -0.68
DNMT1-228ENST00000592705 REG1BP48304 166 aa10.78□□□□□ -0.68
DNMT1-228ENST00000592705 OR4B1Q8NGF8 309 aa10.78□□□□□ -0.68
DNMT1-228ENST00000592705 SPSB4Q96A44 273 aa10.78□□□□□ -0.68
DNMT1-228ENST00000592705 TMEM56-RWDD3S4R434 201 aa10.78□□□□□ -0.68
DNMT1-228ENST00000592705 LINC00869P0C866 280 aa10.78□□□□□ -0.68
DNMT1-228ENST00000592705 GBGT1Q8N5D6 347 aa10.78□□□□□ -0.68
DNMT1-228ENST00000592705 ELOVL1Q9BW60 279 aa10.78□□□□□ -0.68
DNMT1-228ENST00000592705 IDI2-AS1Q9NZ38 188 aa10.78□□□□□ -0.68
DNMT1-228ENST00000592705 PLXNA3P51805 1871 aa10.78□□□□□ -0.68
DNMT1-228ENST00000592705 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.78□□□□□ -0.68
DNMT1-228ENST00000592705 RPL8P62917 257 aaKnown RBP10.78□□□□□ -0.68
DNMT1-228ENST00000592705 TMEM30BQ3MIR4 351 aa10.78□□□□□ -0.68
DNMT1-228ENST00000592705 C19orf24Q9BVV8 132 aa10.78□□□□□ -0.68
DNMT1-228ENST00000592705 PROB1E7EW31 1015 aa10.78□□□□□ -0.68
DNMT1-228ENST00000592705 CORTO00230 105 aa10.78□□□□□ -0.68
DNMT1-228ENST00000592705 CALHM1Q8IU99 346 aa10.78□□□□□ -0.68
DNMT1-228ENST00000592705 TMEM183AQ8IXX5 376 aa10.78□□□□□ -0.68
DNMT1-228ENST00000592705 RTN4RQ9BZR6 473 aa10.78□□□□□ -0.68
DNMT1-228ENST00000592705 UMODP07911 640 aa10.77□□□□□ -0.68
DNMT1-228ENST00000592705 CELA3AP09093 270 aa10.77□□□□□ -0.68
DNMT1-228ENST00000592705 RFPL3SP0C7P2 107 aa10.77□□□□□ -0.68
DNMT1-228ENST00000592705 TCF19Q9Y242 345 aa10.77□□□□□ -0.68
DNMT1-228ENST00000592705 IGKV1-9A0A0C4DH69 117 aa10.77□□□□□ -0.69
DNMT1-228ENST00000592705 H0YIZ8 118 aa10.77□□□□□ -0.69
DNMT1-228ENST00000592705 AMY1AP04745 511 aa10.77□□□□□ -0.69
DNMT1-228ENST00000592705 PRSS1P07477 247 aa10.77□□□□□ -0.69
DNMT1-228ENST00000592705 PPOXP50336 477 aa10.77□□□□□ -0.69
DNMT1-228ENST00000592705 WFDC3Q8IUB2 231 aa10.77□□□□□ -0.69
DNMT1-228ENST00000592705 TRBV9A0A0B4J1U6 114 aa10.77□□□□□ -0.69
DNMT1-228ENST00000592705 RPL27AP46776 148 aaKnown RBP10.77□□□□□ -0.69
DNMT1-228ENST00000592705 FAM106AQ4KMX7 169 aa10.77□□□□□ -0.69
DNMT1-228ENST00000592705 ZNF430Q9H8G1 570 aaPredicted RBP10.77□□□□□ -0.69
DNMT1-228ENST00000592705 CLEC5AQ9NY25 188 aa10.77□□□□□ -0.69
DNMT1-228ENST00000592705 LCN2P80188 198 aa10.77□□□□□ -0.69
DNMT1-228ENST00000592705 REPIN1Q9BWE0 567 aaKnown RBP10.77□□□□□ -0.69
DNMT1-228ENST00000592705 NPFFR1Q9GZQ6 430 aa10.77□□□□□ -0.69
DNMT1-228ENST00000592705 CDC42EP3Q9UKI2 254 aa10.77□□□□□ -0.69
DNMT1-228ENST00000592705 ESPL1Q14674 2120 aa10.76□□□□□ -0.69
DNMT1-228ENST00000592705 MST1P26927 711 aa10.76□□□□□ -0.69
DNMT1-228ENST00000592705 C3orf56Q8N813 242 aa10.76□□□□□ -0.69
DNMT1-228ENST00000592705 SFRP2Q96HF1 295 aa10.76□□□□□ -0.69
DNMT1-228ENST00000592705 C8orf88P0DMB2 117 aa10.76□□□□□ -0.69
DNMT1-228ENST00000592705 ATP5IP56385 69 aaPredicted RBP10.76□□□□□ -0.69
DNMT1-228ENST00000592705 CLDND2Q8NHS1 167 aa10.76□□□□□ -0.69
DNMT1-228ENST00000592705 PMCHL1Q16048 86 aa10.76□□□□□ -0.69
DNMT1-228ENST00000592705 LYZL4Q96KX0 146 aa10.76□□□□□ -0.69
DNMT1-228ENST00000592705 SSBP3Q9BWW4 388 aaPredicted RBP10.76□□□□□ -0.69
DNMT1-228ENST00000592705 ZNF137PP52743 207 aa10.76□□□□□ -0.69
DNMT1-228ENST00000592705 ZNF146Q15072 292 aa10.76□□□□□ -0.69
DNMT1-228ENST00000592705 UNQ5815/PRO19632Q6UWF5 114 aa10.76□□□□□ -0.69
DNMT1-228ENST00000592705 MRPS18CQ9Y3D5 142 aaKnown RBP10.76□□□□□ -0.69
DNMT1-228ENST00000592705 FAM208BQ5VWN6 2430 aa10.76□□□□□ -0.69
DNMT1-228ENST00000592705 ORM1P02763 201 aa10.75□□□□□ -0.69
DNMT1-228ENST00000592705 ABLIM2Q6H8Q1 611 aa10.75□□□□□ -0.69
DNMT1-228ENST00000592705 CYP2G1PQ6ZSU1 146 aa10.75□□□□□ -0.69
DNMT1-228ENST00000592705 TMEM116Q8NCL8 245 aa10.75□□□□□ -0.69
DNMT1-228ENST00000592705 NPCDR1Q9BY65 106 aa10.75□□□□□ -0.69
DNMT1-228ENST00000592705 TMEM106BQ9NUM4 274 aa10.75□□□□□ -0.69
DNMT1-228ENST00000592705 LOC102723996A0A087X1L8 192 aa10.75□□□□□ -0.69
DNMT1-228ENST00000592705 A6NDN8 102 aa10.75□□□□□ -0.69
DNMT1-228ENST00000592705 ZNF716A6NP11 495 aa10.75□□□□□ -0.69
DNMT1-228ENST00000592705 SRSF3P84103 164 aaKnown RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms