RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 RNASE10Q5GAN6 216 aaKnown RBP10.81□□□□□ -0.68
CLIP3-205ENST00000592017 MMD2Q8IY49 270 aa10.81□□□□□ -0.68
CLIP3-205ENST00000592017 CMTM1Q8IZ96 169 aa10.81□□□□□ -0.68
CLIP3-205ENST00000592017 OR11H1Q8NG94 326 aa10.81□□□□□ -0.68
CLIP3-205ENST00000592017 RHOVQ96L33 236 aa10.81□□□□□ -0.68
CLIP3-205ENST00000592017 OR2A7Q96R45 310 aa10.81□□□□□ -0.68
CLIP3-205ENST00000592017 TINAGL1Q9GZM7 467 aaPredicted RBP10.81□□□□□ -0.68
CLIP3-205ENST00000592017 SLIRPQ9GZT3 109 aaKnown RBP10.81□□□□□ -0.68
CLIP3-205ENST00000592017 COA4Q9NYJ1 87 aa10.81□□□□□ -0.68
CLIP3-205ENST00000592017 I3L521 148 aa10.8□□□□□ -0.68
CLIP3-205ENST00000592017 GPR31O00270 319 aa10.8□□□□□ -0.68
CLIP3-205ENST00000592017 PGLYRP1O75594 196 aaPredicted RBP10.8□□□□□ -0.68
CLIP3-205ENST00000592017 TPPPO94811 219 aa10.8□□□□□ -0.68
CLIP3-205ENST00000592017 S1PR2O95136 353 aa10.8□□□□□ -0.68
CLIP3-205ENST00000592017 CD3DP04234 171 aa10.8□□□□□ -0.68
CLIP3-205ENST00000592017 RPA2P15927 270 aa10.8□□□□□ -0.68
CLIP3-205ENST00000592017 VAX1Q5SQQ9 334 aa10.8□□□□□ -0.68
CLIP3-205ENST00000592017 ASPHD1Q5U4P2 390 aa10.8□□□□□ -0.68
CLIP3-205ENST00000592017 PUSL1Q8N0Z8 303 aaKnown RBP10.8□□□□□ -0.68
CLIP3-205ENST00000592017 OR1N2Q8NGR9 330 aa10.8□□□□□ -0.68
CLIP3-205ENST00000592017 MCFD2Q8NI22 146 aa10.8□□□□□ -0.68
CLIP3-205ENST00000592017 SLA2Q9H6Q3 261 aa10.8□□□□□ -0.68
CLIP3-205ENST00000592017 HRASLSQ9HDD0 168 aa10.8□□□□□ -0.68
CLIP3-205ENST00000592017 MTFP1Q9UDX5 166 aa10.8□□□□□ -0.68
CLIP3-205ENST00000592017 GABARAPH6UMI1 98 aa10.79□□□□□ -0.68
CLIP3-205ENST00000592017 RBFOX2O43251 390 aaKnown RBP eCLIP10.79□□□□□ -0.68
CLIP3-205ENST00000592017 HPRT1P00492 218 aa10.79□□□□□ -0.68
CLIP3-205ENST00000592017 LGALS1P09382 135 aaKnown RBP10.79□□□□□ -0.68
CLIP3-205ENST00000592017 PGAM2P15259 253 aa10.79□□□□□ -0.68
CLIP3-205ENST00000592017 S100GP29377 79 aa10.79□□□□□ -0.68
CLIP3-205ENST00000592017 MRPS10P82664 201 aaKnown RBP10.79□□□□□ -0.68
CLIP3-205ENST00000592017 ZNF616Q08AN1 781 aa10.79□□□□□ -0.68
CLIP3-205ENST00000592017 OR4A47Q6IF82 309 aa10.79□□□□□ -0.68
CLIP3-205ENST00000592017 DMBX1Q8NFW5 382 aa10.79□□□□□ -0.68
CLIP3-205ENST00000592017 TMEM167AQ8TBQ9 72 aa10.79□□□□□ -0.68
CLIP3-205ENST00000592017 CD300LFQ8TDQ1 290 aa10.79□□□□□ -0.68
CLIP3-205ENST00000592017 DPF1Q92782 380 aa10.79□□□□□ -0.68
CLIP3-205ENST00000592017 TMEM68Q96MH6 324 aa10.79□□□□□ -0.68
CLIP3-205ENST00000592017 FYTTD1Q96QD9 318 aaKnown RBP10.79□□□□□ -0.68
CLIP3-205ENST00000592017 RSL24D1Q9UHA3 163 aaKnown RBP10.79□□□□□ -0.68
CLIP3-205ENST00000592017 C13orf42A0A1B0GVH6 325 aa10.78□□□□□ -0.68
CLIP3-205ENST00000592017 HMX3A6NHT5 357 aa10.78□□□□□ -0.68
CLIP3-205ENST00000592017 H3BUA1 57 aa10.78□□□□□ -0.68
CLIP3-205ENST00000592017 RAB3DO95716 219 aa10.78□□□□□ -0.68
CLIP3-205ENST00000592017 OR8U8P0C7N1 319 aa10.78□□□□□ -0.68
CLIP3-205ENST00000592017 OR9G9P0C7N8 305 aa10.78□□□□□ -0.68
CLIP3-205ENST00000592017 NQO2P16083 231 aa10.78□□□□□ -0.68
CLIP3-205ENST00000592017 TBPP20226 339 aa10.78□□□□□ -0.68
CLIP3-205ENST00000592017 RPL27AP46776 148 aaKnown RBP10.78□□□□□ -0.68
CLIP3-205ENST00000592017 PPP5CP53041 499 aa10.78□□□□□ -0.68
CLIP3-205ENST00000592017 TAS2R31P59538 309 aa10.78□□□□□ -0.68
CLIP3-205ENST00000592017 TAS2R19P59542 299 aa10.78□□□□□ -0.68
CLIP3-205ENST00000592017 ERVK-16P61578 105 aa10.78□□□□□ -0.68
CLIP3-205ENST00000592017 RUNX1Q01196 453 aa10.78□□□□□ -0.68
CLIP3-205ENST00000592017 FHL3Q13643 280 aa10.78□□□□□ -0.68
CLIP3-205ENST00000592017 SCGB2B2Q4G0G5 96 aa10.78□□□□□ -0.68
CLIP3-205ENST00000592017 LPCAT3Q6P1A2 487 aa10.78□□□□□ -0.68
CLIP3-205ENST00000592017 SLC38A6Q8IZM9 456 aa10.78□□□□□ -0.68
CLIP3-205ENST00000592017 TMEM229BQ8NBD8 167 aa10.78□□□□□ -0.68
CLIP3-205ENST00000592017 OR4D10Q8NGI6 311 aa10.78□□□□□ -0.68
CLIP3-205ENST00000592017 SPIN2AQ99865 258 aa10.78□□□□□ -0.68
CLIP3-205ENST00000592017 SPIN2BQ9BPZ2 258 aa10.78□□□□□ -0.68
CLIP3-205ENST00000592017 AIFM2Q9BRQ8 373 aa10.78□□□□□ -0.68
CLIP3-205ENST00000592017 MCRIP2Q9BUT9 160 aaKnown RBP10.78□□□□□ -0.68
CLIP3-205ENST00000592017 TMEM140Q9NV12 185 aa10.78□□□□□ -0.68
CLIP3-205ENST00000592017 COMMD9Q9P000 198 aa10.78□□□□□ -0.68
CLIP3-205ENST00000592017 IGHV4OR15-8A0A075B7B6 117 aa10.77□□□□□ -0.69
CLIP3-205ENST00000592017 A0A087WW49 117 aa10.77□□□□□ -0.69
CLIP3-205ENST00000592017 PRH1P02810 166 aa10.77□□□□□ -0.69
CLIP3-205ENST00000592017 MYOD1P15172 320 aa10.77□□□□□ -0.69
CLIP3-205ENST00000592017 PI3P19957 117 aa10.77□□□□□ -0.69
CLIP3-205ENST00000592017 F2RP25116 425 aa10.77□□□□□ -0.69
CLIP3-205ENST00000592017 LPAR6P43657 344 aa10.77□□□□□ -0.69
CLIP3-205ENST00000592017 RPL8P62917 257 aaKnown RBP10.77□□□□□ -0.69
CLIP3-205ENST00000592017 FAAP20Q6NZ36 180 aa10.77□□□□□ -0.69
CLIP3-205ENST00000592017 STEAP1BQ6NZ63 245 aa10.77□□□□□ -0.69
CLIP3-205ENST00000592017 TBC1D26Q86UD7 250 aa10.77□□□□□ -0.69
CLIP3-205ENST00000592017 ARRDC1Q8N5I2 433 aa10.77□□□□□ -0.69
CLIP3-205ENST00000592017 ADAD2Q8NCV1 583 aaKnown RBP10.77□□□□□ -0.69
CLIP3-205ENST00000592017 OR4A5Q8NH83 315 aa10.77□□□□□ -0.69
CLIP3-205ENST00000592017 SMIM4Q8WVI0 70 aa10.77□□□□□ -0.69
CLIP3-205ENST00000592017 DGCR14Q96DF8 476 aaKnown RBP10.77□□□□□ -0.69
CLIP3-205ENST00000592017 RSRP1Q9BUV0 290 aa10.77□□□□□ -0.69
CLIP3-205ENST00000592017 GPR61Q9BZJ8 451 aa10.77□□□□□ -0.69
CLIP3-205ENST00000592017 RBM38Q9H0Z9 239 aaKnown RBP10.77□□□□□ -0.69
CLIP3-205ENST00000592017 PLEKHA2Q9HB19 425 aa10.77□□□□□ -0.69
CLIP3-205ENST00000592017 BET1LQ9NYM9 111 aa10.77□□□□□ -0.69
CLIP3-205ENST00000592017 DPPA5A6NC42 116 aa10.76□□□□□ -0.69
CLIP3-205ENST00000592017 LINC01619G3V211 115 aa10.76□□□□□ -0.69
CLIP3-205ENST00000592017 HLA-GP17693 338 aa10.76□□□□□ -0.69
CLIP3-205ENST00000592017 TNFSF8P32971 234 aa10.76□□□□□ -0.69
CLIP3-205ENST00000592017 MAS1LP35410 378 aa10.76□□□□□ -0.69
CLIP3-205ENST00000592017 SLURP1P55000 103 aa10.76□□□□□ -0.69
CLIP3-205ENST00000592017 UCP3P55916 312 aa10.76□□□□□ -0.69
CLIP3-205ENST00000592017 NXF2Q9GZY0 626 aaKnown RBP10.76□□□□□ -0.69
CLIP3-205ENST00000592017 SLC2A9Q9NRM0 540 aa10.76□□□□□ -0.69
CLIP3-205ENST00000592017 RABL2AQ9UBK7 228 aaPredicted RBP10.76□□□□□ -0.69
CLIP3-205ENST00000592017 RABL2BQ9UNT1 228 aa10.76□□□□□ -0.69
CLIP3-205ENST00000592017 TRAV3A0A0B4J244 114 aa10.75□□□□□ -0.69
CLIP3-205ENST00000592017 A0A0G2JLM5 398 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms