RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 DOLPP1Q86YN1 238 aa10.31□□□□□ -0.76
SMARCA4-217ENST00000591595 OR10AG1Q8NH19 301 aa10.31□□□□□ -0.76
SMARCA4-217ENST00000591595 BORCS8Q96FH0 119 aa10.31□□□□□ -0.76
SMARCA4-217ENST00000591595 NAA38Q9BRA0 125 aaKnown RBP10.31□□□□□ -0.76
SMARCA4-217ENST00000591595 RAB1BQ9H0U4 201 aa10.31□□□□□ -0.76
SMARCA4-217ENST00000591595 NAA60Q9H7X0 242 aa10.31□□□□□ -0.76
SMARCA4-217ENST00000591595 A0A087X0K7 114 aa10.31□□□□□ -0.76
SMARCA4-217ENST00000591595 LOC102725191A0A1B0GVB3 256 aa10.31□□□□□ -0.76
SMARCA4-217ENST00000591595 SNURFLB1AK76 121 aa10.31□□□□□ -0.76
SMARCA4-217ENST00000591595 TNFRSF13BO14836 293 aaPredicted RBP10.31□□□□□ -0.76
SMARCA4-217ENST00000591595 PHF1O43189 567 aaPredicted RBP10.31□□□□□ -0.76
SMARCA4-217ENST00000591595 LIAT1Q6ZQX7 453 aa10.31□□□□□ -0.76
SMARCA4-217ENST00000591595 SLC25A45Q8N413 288 aa10.31□□□□□ -0.76
SMARCA4-217ENST00000591595 C18orf12Q96KH6 178 aa10.31□□□□□ -0.76
SMARCA4-217ENST00000591595 UCN2Q96RP3 112 aa10.31□□□□□ -0.76
SMARCA4-217ENST00000591595 KCNIP1Q9NZI2 227 aa10.31□□□□□ -0.76
SMARCA4-217ENST00000591595 MTCH1Q9NZJ7 389 aa10.31□□□□□ -0.76
SMARCA4-217ENST00000591595 ERG28Q9UKR5 140 aa10.31□□□□□ -0.76
SMARCA4-217ENST00000591595 KIAA1549Q9HCM3 1950 aa10.31□□□□□ -0.76
SMARCA4-217ENST00000591595 VDAC1P21796 283 aa10.31□□□□□ -0.76
SMARCA4-217ENST00000591595 IGFBP4P22692 258 aa10.31□□□□□ -0.76
SMARCA4-217ENST00000591595 MDH2P40926 338 aaKnown RBP10.31□□□□□ -0.76
SMARCA4-217ENST00000591595 ZNF90Q03938 601 aa10.31□□□□□ -0.76
SMARCA4-217ENST00000591595 SPCS1Q9Y6A9 102 aa10.31□□□□□ -0.76
SMARCA4-217ENST00000591595 DHHO43323 396 aa10.3□□□□□ -0.76
SMARCA4-217ENST00000591595 IER3P46695 156 aa10.3□□□□□ -0.76
SMARCA4-217ENST00000591595 HERV-K104P61576 105 aa10.3□□□□□ -0.76
SMARCA4-217ENST00000591595 OR10J3Q5JRS4 329 aa10.3□□□□□ -0.76
SMARCA4-217ENST00000591595 SPSB4Q96A44 273 aa10.3□□□□□ -0.76
SMARCA4-217ENST00000591595 COMMD5Q9GZQ3 224 aa10.3□□□□□ -0.76
SMARCA4-217ENST00000591595 GP6Q9HCN6 339 aa10.3□□□□□ -0.76
SMARCA4-217ENST00000591595 A0A1W2PPV4 95 aa10.3□□□□□ -0.76
SMARCA4-217ENST00000591595 IGFBP2P18065 325 aa10.3□□□□□ -0.76
SMARCA4-217ENST00000591595 USF1P22415 310 aaPredicted RBP10.3□□□□□ -0.76
SMARCA4-217ENST00000591595 OTX2P32243 289 aa10.3□□□□□ -0.76
SMARCA4-217ENST00000591595 SSTR5P35346 364 aa10.3□□□□□ -0.76
SMARCA4-217ENST00000591595 SEC11AP67812 179 aa10.3□□□□□ -0.76
SMARCA4-217ENST00000591595 PLCXD3Q63HM9 321 aa10.3□□□□□ -0.76
SMARCA4-217ENST00000591595 LRTM2Q8N967 370 aa10.3□□□□□ -0.76
SMARCA4-217ENST00000591595 ZNF442Q9H7R0 627 aa10.3□□□□□ -0.76
SMARCA4-217ENST00000591595 WNT16Q9UBV4 365 aa10.3□□□□□ -0.76
SMARCA4-217ENST00000591595 URB1O60287 2271 aaKnown RBP10.3□□□□□ -0.76
SMARCA4-217ENST00000591595 SHANK1Q9Y566 2161 aa10.3□□□□□ -0.76
SMARCA4-217ENST00000591595 PTGDSP41222 190 aa10.29□□□□□ -0.76
SMARCA4-217ENST00000591595 DTX1Q86Y01 620 aa10.29□□□□□ -0.76
SMARCA4-217ENST00000591595 ODF3L1Q8IXM7 274 aa10.29□□□□□ -0.76
SMARCA4-217ENST00000591595 MSI2Q96DH6 328 aaKnown RBP10.29□□□□□ -0.76
SMARCA4-217ENST00000591595 GPR82Q96P67 336 aa10.29□□□□□ -0.76
SMARCA4-217ENST00000591595 C19orf25Q9UFG5 118 aaPredicted RBP10.29□□□□□ -0.76
SMARCA4-217ENST00000591595 SRD5A2P31213 254 aa10.29□□□□□ -0.76
SMARCA4-217ENST00000591595 Q96M66 194 aa10.29□□□□□ -0.76
SMARCA4-217ENST00000591595 DUSP23Q9BVJ7 150 aa10.29□□□□□ -0.76
SMARCA4-217ENST00000591595 CFAP54Q96N23 3096 aa10.29□□□□□ -0.76
SMARCA4-217ENST00000591595 PATE4P0C8F1 98 aa10.29□□□□□ -0.76
SMARCA4-217ENST00000591595 ACSF3Q4G176 576 aaPredicted RBP10.29□□□□□ -0.76
SMARCA4-217ENST00000591595 SLC25A53Q5H9E4 307 aa10.29□□□□□ -0.76
SMARCA4-217ENST00000591595 FOXI2Q6ZQN5 318 aa10.29□□□□□ -0.76
SMARCA4-217ENST00000591595 FA2HQ7L5A8 372 aa10.29□□□□□ -0.76
SMARCA4-217ENST00000591595 SPATA12Q7Z6I5 190 aa10.29□□□□□ -0.76
SMARCA4-217ENST00000591595 OR52E5Q8NH55 327 aa10.29□□□□□ -0.76
SMARCA4-217ENST00000591595 TSKUQ8WUA8 353 aa10.29□□□□□ -0.76
SMARCA4-217ENST00000591595 NEU4Q8WWR8 484 aaPredicted RBP10.29□□□□□ -0.76
SMARCA4-217ENST00000591595 LIME1Q9H400 295 aa10.29□□□□□ -0.76
SMARCA4-217ENST00000591595 SLC39A9Q9NUM3 307 aa10.29□□□□□ -0.76
SMARCA4-217ENST00000591595 ARL2-SNX15V9GYD0 113 aa10.29□□□□□ -0.76
SMARCA4-217ENST00000591595 A0A0G2JLM5 398 aa10.28□□□□□ -0.76
SMARCA4-217ENST00000591595 hCG_38984A0A1B0GV85 526 aa10.28□□□□□ -0.76
SMARCA4-217ENST00000591595 MDFIC2A0A1B0GVS7 189 aa10.28□□□□□ -0.76
SMARCA4-217ENST00000591595 A4D1N5 150 aa10.28□□□□□ -0.76
SMARCA4-217ENST00000591595 GPR12P47775 334 aa10.28□□□□□ -0.76
SMARCA4-217ENST00000591595 PIGYQ3MUY2 71 aa10.28□□□□□ -0.76
SMARCA4-217ENST00000591595 SCGB1C1Q8TD33 95 aa10.28□□□□□ -0.76
SMARCA4-217ENST00000591595 SSC4DQ8WTU2 575 aa10.28□□□□□ -0.76
SMARCA4-217ENST00000591595 ZNF837Q96EG3 531 aaPredicted RBP10.28□□□□□ -0.76
SMARCA4-217ENST00000591595 NEIL1Q96FI4 390 aaPredicted RBP10.28□□□□□ -0.76
SMARCA4-217ENST00000591595 AKIRIN1Q9H9L7 192 aaPredicted RBP10.28□□□□□ -0.76
SMARCA4-217ENST00000591595 HSPB8Q9UJY1 196 aa10.28□□□□□ -0.76
SMARCA4-217ENST00000591595 OR7C1O76099 320 aaPredicted RBP10.28□□□□□ -0.76
SMARCA4-217ENST00000591595 CELA2AP08217 269 aa10.28□□□□□ -0.76
SMARCA4-217ENST00000591595 ASCL4Q6XD76 172 aa10.28□□□□□ -0.76
SMARCA4-217ENST00000591595 VSTM2AQ8TAG5 236 aa10.28□□□□□ -0.76
SMARCA4-217ENST00000591595 H3BRM9 83 aa10.28□□□□□ -0.76
SMARCA4-217ENST00000591595 FAM186AA6NE01 2351 aa10.27□□□□□ -0.76
SMARCA4-217ENST00000591595 FOXI3A8MTJ6 420 aaPredicted RBP10.27□□□□□ -0.77
SMARCA4-217ENST00000591595 ISLRO14498 428 aa10.27□□□□□ -0.77
SMARCA4-217ENST00000591595 GPR183P32249 361 aa10.27□□□□□ -0.77
SMARCA4-217ENST00000591595 UQCRFS1P47985 274 aa10.27□□□□□ -0.77
SMARCA4-217ENST00000591595 GNG4P50150 75 aa10.27□□□□□ -0.77
SMARCA4-217ENST00000591595 UBE2G1P62253 170 aa10.27□□□□□ -0.77
SMARCA4-217ENST00000591595 TBR1Q16650 682 aa10.27□□□□□ -0.77
SMARCA4-217ENST00000591595 DCAF12Q5T6F0 453 aa10.27□□□□□ -0.77
SMARCA4-217ENST00000591595 MS4A5Q9H3V2 200 aa10.27□□□□□ -0.77
SMARCA4-217ENST00000591595 CLCF1Q9UBD9 225 aa10.27□□□□□ -0.77
SMARCA4-217ENST00000591595 UBE2J1Q9Y385 318 aaPredicted RBP10.27□□□□□ -0.77
SMARCA4-217ENST00000591595 IGLV3-12A0A075B6K2 115 aa10.27□□□□□ -0.77
SMARCA4-217ENST00000591595 SLC17A3O00476 420 aa10.27□□□□□ -0.77
SMARCA4-217ENST00000591595 NXPH3O95157 252 aa10.27□□□□□ -0.77
SMARCA4-217ENST00000591595 HLA-DRB1P01911 266 aa10.27□□□□□ -0.77
SMARCA4-217ENST00000591595 CRIP3Q6Q6R5 217 aa10.27□□□□□ -0.77
SMARCA4-217ENST00000591595 GATAD1Q8WUU5 269 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms