RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 LY6EQ16553 131 aa11.35□□□□□ -0.59
SMARCA4-216ENST00000591545 ZNF841Q6ZN19 808 aa11.35□□□□□ -0.59
SMARCA4-216ENST00000591545 QTRT1Q9BXR0 403 aaKnown RBP11.35□□□□□ -0.59
SMARCA4-216ENST00000591545 H0YL77 283 aa11.35□□□□□ -0.59
SMARCA4-216ENST00000591545 PF4P02776 101 aa11.35□□□□□ -0.59
SMARCA4-216ENST00000591545 PSG9Q00887 426 aa11.35□□□□□ -0.59
SMARCA4-216ENST00000591545 TMEM187Q14656 261 aa11.35□□□□□ -0.59
SMARCA4-216ENST00000591545 OR10J6PQ8NGY7 276 aa11.35□□□□□ -0.59
SMARCA4-216ENST00000591545 CECR9P0C854 216 aa11.35□□□□□ -0.59
SMARCA4-216ENST00000591545 CKS2P33552 79 aa11.35□□□□□ -0.59
SMARCA4-216ENST00000591545 CA7P43166 264 aa11.35□□□□□ -0.59
SMARCA4-216ENST00000591545 ABHD12Q8N2K0 398 aa11.35□□□□□ -0.59
SMARCA4-216ENST00000591545 WDYHV1Q96HA8 205 aa11.35□□□□□ -0.59
SMARCA4-216ENST00000591545 TMEM106BQ9NUM4 274 aa11.35□□□□□ -0.59
SMARCA4-216ENST00000591545 IGKV1D-42A0A075B6H8 117 aa11.34□□□□□ -0.59
SMARCA4-216ENST00000591545 ZNF729A6NN14 1252 aaPredicted RBP11.34□□□□□ -0.59
SMARCA4-216ENST00000591545 NPIPB6E9PJ23 425 aa11.34□□□□□ -0.59
SMARCA4-216ENST00000591545 ZXDCQ2QGD7 858 aaPredicted RBP11.34□□□□□ -0.59
SMARCA4-216ENST00000591545 CENPVQ7Z7K6 275 aaPredicted RBP11.34□□□□□ -0.59
SMARCA4-216ENST00000591545 OR11H4Q8NGC9 324 aa11.34□□□□□ -0.59
SMARCA4-216ENST00000591545 OR10S1Q8NGN2 331 aa11.34□□□□□ -0.59
SMARCA4-216ENST00000591545 COPS9Q8WXC6 57 aa11.34□□□□□ -0.59
SMARCA4-216ENST00000591545 MAP1LC3AQ9H492 121 aa11.34□□□□□ -0.59
SMARCA4-216ENST00000591545 NPIPB9F8W1W9 429 aa11.34□□□□□ -0.59
SMARCA4-216ENST00000591545 ZIC3O60481 467 aa11.34□□□□□ -0.59
SMARCA4-216ENST00000591545 RAB9AP51151 201 aa11.34□□□□□ -0.59
SMARCA4-216ENST00000591545 LINC01590Q5TEZ4 76 aa11.34□□□□□ -0.59
SMARCA4-216ENST00000591545 LAMTOR1Q6IAA8 161 aa11.34□□□□□ -0.59
SMARCA4-216ENST00000591545 NUP37Q8NFH4 326 aa11.34□□□□□ -0.59
SMARCA4-216ENST00000591545 DNAJC4Q9NNZ3 241 aa11.34□□□□□ -0.59
SMARCA4-216ENST00000591545 CACNA1BQ00975 2339 aa11.34□□□□□ -0.59
SMARCA4-216ENST00000591545 PTGDSP41222 190 aa11.34□□□□□ -0.59
SMARCA4-216ENST00000591545 ZNF506Q5JVG8 444 aa11.34□□□□□ -0.59
SMARCA4-216ENST00000591545 PGPA6NDG6 321 aa11.34□□□□□ -0.59
SMARCA4-216ENST00000591545 C19orf67A6NJJ6 358 aa11.34□□□□□ -0.59
SMARCA4-216ENST00000591545 C17orf51A8MQB3 221 aa11.34□□□□□ -0.59
SMARCA4-216ENST00000591545 MDKP21741 143 aaPredicted RBP11.34□□□□□ -0.59
SMARCA4-216ENST00000591545 MIC13Q5XKP0 118 aa11.34□□□□□ -0.59
SMARCA4-216ENST00000591545 AMMECR1LQ6DCA0 310 aa11.34□□□□□ -0.59
SMARCA4-216ENST00000591545 HIST1H2BAQ96A08 127 aa11.34□□□□□ -0.59
SMARCA4-216ENST00000591545 MSRB2Q9Y3D2 182 aa11.34□□□□□ -0.59
SMARCA4-216ENST00000591545 CRXO43186 299 aaPredicted RBP11.33□□□□□ -0.6
SMARCA4-216ENST00000591545 HLA-DRB1P01911 266 aa11.33□□□□□ -0.6
SMARCA4-216ENST00000591545 UNC119Q13432 240 aa11.33□□□□□ -0.6
SMARCA4-216ENST00000591545 SNAI3Q3KNW1 292 aa11.33□□□□□ -0.6
SMARCA4-216ENST00000591545 C9orf106Q8NAJ2 232 aa11.33□□□□□ -0.6
SMARCA4-216ENST00000591545 METTL26Q96S19 204 aa11.33□□□□□ -0.6
SMARCA4-216ENST00000591545 MIEN1Q9BRT3 115 aa11.33□□□□□ -0.6
SMARCA4-216ENST00000591545 TGIF2-C20orf24A0A0A6YYL0 155 aa11.33□□□□□ -0.6
SMARCA4-216ENST00000591545 HTN1P15515 57 aa11.33□□□□□ -0.6
SMARCA4-216ENST00000591545 FADS6Q8N9I5 356 aa11.33□□□□□ -0.6
SMARCA4-216ENST00000591545 JMJD8Q96S16 334 aa11.33□□□□□ -0.6
SMARCA4-216ENST00000591545 GPR61Q9BZJ8 451 aa11.33□□□□□ -0.6
SMARCA4-216ENST00000591545 CARHSP1Q9Y2V2 147 aaKnown RBP11.33□□□□□ -0.6
SMARCA4-216ENST00000591545 NEUROG3Q9Y4Z2 214 aa11.33□□□□□ -0.6
SMARCA4-216ENST00000591545 MGAMO43451 1857 aa11.33□□□□□ -0.6
SMARCA4-216ENST00000591545 TGFAP01135 160 aa11.33□□□□□ -0.6
SMARCA4-216ENST00000591545 NRN1LQ496H8 165 aa11.33□□□□□ -0.6
SMARCA4-216ENST00000591545 FAM106AQ4KMX7 169 aa11.33□□□□□ -0.6
SMARCA4-216ENST00000591545 WDR25Q64LD2 544 aaPredicted RBP11.33□□□□□ -0.6
SMARCA4-216ENST00000591545 LAIR2Q6ISS4 152 aa11.33□□□□□ -0.6
SMARCA4-216ENST00000591545 C21orf62-AS1Q17RA5 79 aa11.33□□□□□ -0.6
SMARCA4-216ENST00000591545 OR10AG1Q8NH19 301 aa11.33□□□□□ -0.6
SMARCA4-216ENST00000591545 A0A0G2JMM0 328 aa11.32□□□□□ -0.6
SMARCA4-216ENST00000591545 A0A1W2PPB8 328 aa11.32□□□□□ -0.6
SMARCA4-216ENST00000591545 A0A1W2PRS3 328 aa11.32□□□□□ -0.6
SMARCA4-216ENST00000591545 KIR3DP1A8MWS1 328 aa11.32□□□□□ -0.6
SMARCA4-216ENST00000591545 EBLN2Q6P2I7 272 aa11.32□□□□□ -0.6
SMARCA4-216ENST00000591545 DNM1P46Q6ZS02 220 aa11.32□□□□□ -0.6
SMARCA4-216ENST00000591545 PNKDQ8N490 385 aa11.32□□□□□ -0.6
SMARCA4-216ENST00000591545 ZNF502Q8TBZ5 544 aa11.32□□□□□ -0.6
SMARCA4-216ENST00000591545 TMEM186Q96B77 213 aa11.32□□□□□ -0.6
SMARCA4-216ENST00000591545 ARID1AO14497 2285 aa11.32□□□□□ -0.6
SMARCA4-216ENST00000591545 LOC389332A0A1B0GUA5 103 aa11.32□□□□□ -0.6
SMARCA4-216ENST00000591545 OR52M1Q8NGK5 317 aa11.32□□□□□ -0.6
SMARCA4-216ENST00000591545 SS18L1O75177 396 aaPredicted RBP11.32□□□□□ -0.6
SMARCA4-216ENST00000591545 PLP1P60201 277 aa11.32□□□□□ -0.6
SMARCA4-216ENST00000591545 C2orf68Q2NKX9 166 aa11.32□□□□□ -0.6
SMARCA4-216ENST00000591545 TCF24Q7RTU0 167 aa11.32□□□□□ -0.6
SMARCA4-216ENST00000591545 MARCH11A6NNE9 402 aa11.32□□□□□ -0.6
SMARCA4-216ENST00000591545 J3KRW8 73 aa11.32□□□□□ -0.6
SMARCA4-216ENST00000591545 HINT1P49773 126 aaPredicted RBP11.32□□□□□ -0.6
SMARCA4-216ENST00000591545 MFAP4P55083 255 aa11.32□□□□□ -0.6
SMARCA4-216ENST00000591545 LCN2P80188 198 aa11.32□□□□□ -0.6
SMARCA4-216ENST00000591545 ZNF146Q15072 292 aa11.32□□□□□ -0.6
SMARCA4-216ENST00000591545 CACNA1IQ9P0X4 2223 aa11.31□□□□□ -0.6
SMARCA4-216ENST00000591545 WNT9BO14905 357 aa11.31□□□□□ -0.6
SMARCA4-216ENST00000591545 OR51G1Q8NGK1 321 aa11.31□□□□□ -0.6
SMARCA4-216ENST00000591545 GALNT14Q96FL9 552 aa11.31□□□□□ -0.6
SMARCA4-216ENST00000591545 SSBP3Q9BWW4 388 aaPredicted RBP11.31□□□□□ -0.6
SMARCA4-216ENST00000591545 TMEM56-RWDD3S4R434 201 aa11.31□□□□□ -0.6
SMARCA4-216ENST00000591545 RND2P52198 227 aa11.31□□□□□ -0.6
SMARCA4-216ENST00000591545 TMEM177Q53S58 311 aa11.31□□□□□ -0.6
SMARCA4-216ENST00000591545 GATAD1Q8WUU5 269 aa11.31□□□□□ -0.6
SMARCA4-216ENST00000591545 PARLQ9H300 379 aa11.31□□□□□ -0.6
SMARCA4-216ENST00000591545 ARL14EPLP0DKL9 152 aa11.31□□□□□ -0.6
SMARCA4-216ENST00000591545 TCF19Q9Y242 345 aa11.31□□□□□ -0.6
SMARCA4-216ENST00000591545 GREB1Q4ZG55 1949 aa11.31□□□□□ -0.6
SMARCA4-216ENST00000591545 IGHV3OR16-10A0A075B7F0 116 aa11.3□□□□□ -0.6
SMARCA4-216ENST00000591545 IGHV2OR16-5A0A0B4J2B6 119 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms