RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 LGALS1P09382 135 aaKnown RBP8.66□□□□□ -1.02
SMAD4-211ENST00000590499 RFX2P48378 723 aa8.66□□□□□ -1.02
SMAD4-211ENST00000590499 FXYD4P59646 89 aa8.66□□□□□ -1.02
SMAD4-211ENST00000590499 SPCS2Q15005 226 aa8.66□□□□□ -1.02
SMAD4-211ENST00000590499 ZNF818PQ6ZRF7 136 aa8.66□□□□□ -1.02
SMAD4-211ENST00000590499 SNX29P2Q8IUI4 249 aa8.66□□□□□ -1.02
SMAD4-211ENST00000590499 PUSL1Q8N0Z8 303 aaKnown RBP8.66□□□□□ -1.02
SMAD4-211ENST00000590499 POC5Q8NA72 575 aa8.66□□□□□ -1.02
SMAD4-211ENST00000590499 OR1N2Q8NGR9 330 aa8.66□□□□□ -1.02
SMAD4-211ENST00000590499 AP3S1Q92572 193 aa8.66□□□□□ -1.02
SMAD4-211ENST00000590499 MOB3AQ96BX8 217 aa8.66□□□□□ -1.02
SMAD4-211ENST00000590499 TMEM68Q96MH6 324 aa8.66□□□□□ -1.02
SMAD4-211ENST00000590499 OR5B12Q96R08 314 aa8.66□□□□□ -1.02
SMAD4-211ENST00000590499 GPR61Q9BZJ8 451 aa8.66□□□□□ -1.02
SMAD4-211ENST00000590499 SLC5A7Q9GZV3 580 aa8.66□□□□□ -1.02
SMAD4-211ENST00000590499 ALX4Q9H161 411 aaPredicted RBP8.66□□□□□ -1.02
SMAD4-211ENST00000590499 SLA2Q9H6Q3 261 aa8.66□□□□□ -1.02
SMAD4-211ENST00000590499 ZNF430Q9H8G1 570 aaPredicted RBP8.66□□□□□ -1.02
SMAD4-211ENST00000590499 SORL1Q92673 2214 aa8.66□□□□□ -1.02
SMAD4-211ENST00000590499 COL7A1Q02388 2944 aa8.65□□□□□ -1.02
SMAD4-211ENST00000590499 SMIM31A0A1B0GVY4 71 aa8.65□□□□□ -1.02
SMAD4-211ENST00000590499 SULT1C2O00338 296 aa8.65□□□□□ -1.02
SMAD4-211ENST00000590499 RBFOX2O43251 390 aaKnown RBP eCLIP8.65□□□□□ -1.02
SMAD4-211ENST00000590499 TNFSF12O43508 249 aa8.65□□□□□ -1.02
SMAD4-211ENST00000590499 RAMP3O60896 148 aa8.65□□□□□ -1.02
SMAD4-211ENST00000590499 KBTBD11O94819 623 aa8.65□□□□□ -1.02
SMAD4-211ENST00000590499 PMP2P02689 132 aa8.65□□□□□ -1.02
SMAD4-211ENST00000590499 OR8U8P0C7N1 319 aa8.65□□□□□ -1.02
SMAD4-211ENST00000590499 GNRHRP30968 328 aa8.65□□□□□ -1.02
SMAD4-211ENST00000590499 HOXD3P31249 432 aaPredicted RBP8.65□□□□□ -1.02
SMAD4-211ENST00000590499 HRH1P35367 487 aa8.65□□□□□ -1.02
SMAD4-211ENST00000590499 KIR2DS2P43631 304 aa8.65□□□□□ -1.02
SMAD4-211ENST00000590499 RAB25P57735 213 aa8.65□□□□□ -1.02
SMAD4-211ENST00000590499 TPPP2P59282 170 aa8.65□□□□□ -1.02
SMAD4-211ENST00000590499 ZNF616Q08AN1 781 aa8.65□□□□□ -1.02
SMAD4-211ENST00000590499 MZT2AQ6P582 158 aa8.65□□□□□ -1.02
SMAD4-211ENST00000590499 TMEM17Q86X19 198 aa8.65□□□□□ -1.02
SMAD4-211ENST00000590499 MMD2Q8IY49 270 aa8.65□□□□□ -1.02
SMAD4-211ENST00000590499 VKORC1L1Q8N0U8 176 aa8.65□□□□□ -1.02
SMAD4-211ENST00000590499 OR5T1Q8NG75 326 aa8.65□□□□□ -1.02
SMAD4-211ENST00000590499 OR5H2Q8NGV7 314 aa8.65□□□□□ -1.02
SMAD4-211ENST00000590499 TMEM167AQ8TBQ9 72 aa8.65□□□□□ -1.02
SMAD4-211ENST00000590499 SRSF12Q8WXF0 261 aaKnown RBP8.65□□□□□ -1.02
SMAD4-211ENST00000590499 MS4A10Q96PG2 267 aa8.65□□□□□ -1.02
SMAD4-211ENST00000590499 BCL7BQ9BQE9 202 aa8.65□□□□□ -1.02
SMAD4-211ENST00000590499 ZNF2Q9BSG1 426 aaPredicted RBP8.65□□□□□ -1.02
SMAD4-211ENST00000590499 FXYD6Q9H0Q3 95 aa8.65□□□□□ -1.02
SMAD4-211ENST00000590499 MIXL1Q9H2W2 232 aa8.65□□□□□ -1.02
SMAD4-211ENST00000590499 MSGN1A6NI15 193 aa8.64□□□□□ -1.03
SMAD4-211ENST00000590499 K7EIL1 84 aa8.64□□□□□ -1.03
SMAD4-211ENST00000590499 CREBL2O60519 120 aaPredicted RBP8.64□□□□□ -1.03
SMAD4-211ENST00000590499 RBMXL2O75526 392 aaKnown RBP8.64□□□□□ -1.03
SMAD4-211ENST00000590499 TPPPO94811 219 aa8.64□□□□□ -1.03
SMAD4-211ENST00000590499 OR2A4O95047 310 aa8.64□□□□□ -1.03
SMAD4-211ENST00000590499 TRGV3P03979 118 aa8.64□□□□□ -1.03
SMAD4-211ENST00000590499 HLA-DMAP28067 261 aa8.64□□□□□ -1.03
SMAD4-211ENST00000590499 RCVRNP35243 200 aa8.64□□□□□ -1.03
SMAD4-211ENST00000590499 RPL5P46777 297 aaKnown RBP8.64□□□□□ -1.03
SMAD4-211ENST00000590499 TMBIM6P55061 237 aa8.64□□□□□ -1.03
SMAD4-211ENST00000590499 HERV-K104P61576 105 aa8.64□□□□□ -1.03
SMAD4-211ENST00000590499 TNXAQ16473 311 aa8.64□□□□□ -1.03
SMAD4-211ENST00000590499 POU2AF1Q16633 256 aa8.64□□□□□ -1.03
SMAD4-211ENST00000590499 C10orf55Q5SWW7 151 aa8.64□□□□□ -1.03
SMAD4-211ENST00000590499 CLVS1Q8IUQ0 354 aaPredicted RBP8.64□□□□□ -1.03
SMAD4-211ENST00000590499 SPAG16Q8N0X2 631 aa8.64□□□□□ -1.03
SMAD4-211ENST00000590499 ADAD2Q8NCV1 583 aaKnown RBP8.64□□□□□ -1.03
SMAD4-211ENST00000590499 VSTM2AQ8TAG5 236 aa8.64□□□□□ -1.03
SMAD4-211ENST00000590499 RAB2BQ8WUD1 216 aa8.64□□□□□ -1.03
SMAD4-211ENST00000590499 OR2A7Q96R45 310 aa8.64□□□□□ -1.03
SMAD4-211ENST00000590499 DCUN1D5Q9BTE7 237 aa8.64□□□□□ -1.03
SMAD4-211ENST00000590499 TINAGL1Q9GZM7 467 aaPredicted RBP8.64□□□□□ -1.03
SMAD4-211ENST00000590499 EXTL2Q9UBQ6 330 aa8.64□□□□□ -1.03
SMAD4-211ENST00000590499 IGHV4OR15-8A0A075B7B6 117 aa8.63□□□□□ -1.03
SMAD4-211ENST00000590499 A0A087WW49 117 aa8.63□□□□□ -1.03
SMAD4-211ENST00000590499 A0A1B0GW64 132 aa8.63□□□□□ -1.03
SMAD4-211ENST00000590499 WI2-2373I1.2A0A1W2PRP0 233 aa8.63□□□□□ -1.03
SMAD4-211ENST00000590499 FAM25AB3EWG3 89 aa8.63□□□□□ -1.03
SMAD4-211ENST00000590499 FAM25CB3EWG5 89 aa8.63□□□□□ -1.03
SMAD4-211ENST00000590499 FAM25GB3EWG6 89 aa8.63□□□□□ -1.03
SMAD4-211ENST00000590499 TEX22C9J3V5 150 aa8.63□□□□□ -1.03
SMAD4-211ENST00000590499 HRASP01112 189 aa8.63□□□□□ -1.03
SMAD4-211ENST00000590499 IGHV3-11P01762 117 aa8.63□□□□□ -1.03
SMAD4-211ENST00000590499 IL6RP08887 468 aaPredicted RBP8.63□□□□□ -1.03
SMAD4-211ENST00000590499 APELAP0DMC3 54 aa8.63□□□□□ -1.03
SMAD4-211ENST00000590499 CD40LGP29965 261 aa8.63□□□□□ -1.03
SMAD4-211ENST00000590499 CATR1Q13166 79 aa8.63□□□□□ -1.03
SMAD4-211ENST00000590499 DYNC2LI1Q8TCX1 351 aa8.63□□□□□ -1.03
SMAD4-211ENST00000590499 DPF1Q92782 380 aa8.63□□□□□ -1.03
SMAD4-211ENST00000590499 BORCS5Q969J3 196 aa8.63□□□□□ -1.03
SMAD4-211ENST00000590499 ABHD1Q96SE0 405 aa8.63□□□□□ -1.03
SMAD4-211ENST00000590499 BET1LQ9NYM9 111 aa8.63□□□□□ -1.03
SMAD4-211ENST00000590499 CCDC59Q9P031 241 aaKnown RBP8.63□□□□□ -1.03
SMAD4-211ENST00000590499 SCOCQ9UIL1 159 aa8.63□□□□□ -1.03
SMAD4-211ENST00000590499 SEC14L6B5MCN3 397 aa8.62□□□□□ -1.03
SMAD4-211ENST00000590499 E7EUB6 86 aa8.62□□□□□ -1.03
SMAD4-211ENST00000590499 LINC01619G3V211 115 aa8.62□□□□□ -1.03
SMAD4-211ENST00000590499 PGLYRP1O75594 196 aaPredicted RBP8.62□□□□□ -1.03
SMAD4-211ENST00000590499 HSPB1P04792 205 aaKnown RBP8.62□□□□□ -1.03
SMAD4-211ENST00000590499 OR9G9P0C7N8 305 aa8.62□□□□□ -1.03
SMAD4-211ENST00000590499 SLURP1P55000 103 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms