RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	CCDC71L	Q8N9Z2	235 aa		12.75	□□□□□ -0.37
DDX39A-209	ENST00000589318	PPP1R35	Q8TAP8	253 aa		12.75	□□□□□ -0.37
DDX39A-209	ENST00000589318	C18orf12	Q96KH6	178 aa		12.75	□□□□□ -0.37
DDX39A-209	ENST00000589318	TP53RK	Q96S44	253 aa		12.75	□□□□□ -0.37
DDX39A-209	ENST00000589318	ZFYVE26	Q68DK2	2539 aa		12.75	□□□□□ -0.37
DDX39A-209	ENST00000589318	LRRC30	A6NM36	301 aa		12.74	□□□□□ -0.37
DDX39A-209	ENST00000589318	MMP9	P14780	707 aa		12.74	□□□□□ -0.37
DDX39A-209	ENST00000589318	OR10J1	P30954	320 aa		12.74	□□□□□ -0.37
DDX39A-209	ENST00000589318	RAN	P62826	216 aa	Known RBP	12.74	□□□□□ -0.37
DDX39A-209	ENST00000589318	SRPX	P78539	464 aa		12.74	□□□□□ -0.37
DDX39A-209	ENST00000589318	MRPS11	P82912	194 aa	Known RBP	12.74	□□□□□ -0.37
DDX39A-209	ENST00000589318	BAX	Q07812	192 aa		12.74	□□□□□ -0.37
DDX39A-209	ENST00000589318	LIAT1	Q6ZQX7	453 aa		12.74	□□□□□ -0.37
DDX39A-209	ENST00000589318	THNSL2	Q86YJ6	484 aa		12.74	□□□□□ -0.37
DDX39A-209	ENST00000589318	FAM185A	Q8N0U4	392 aa		12.74	□□□□□ -0.37
DDX39A-209	ENST00000589318	OR2C3	Q8N628	320 aa		12.74	□□□□□ -0.37
DDX39A-209	ENST00000589318	OR10V1	Q8NGI7	309 aa		12.74	□□□□□ -0.37
DDX39A-209	ENST00000589318	TMEM170A	Q8WVE7	144 aa		12.74	□□□□□ -0.37
DDX39A-209	ENST00000589318	GALM	Q96C23	342 aa		12.74	□□□□□ -0.37
DDX39A-209	ENST00000589318	MSI2	Q96DH6	328 aa	Known RBP	12.74	□□□□□ -0.37
DDX39A-209	ENST00000589318	BTF3L4	Q96K17	158 aa		12.74	□□□□□ -0.37
DDX39A-209	ENST00000589318	BBC3	Q96PG8	261 aa	Predicted RBP	12.74	□□□□□ -0.37
DDX39A-209	ENST00000589318	GPHA2	Q96T91	129 aa		12.74	□□□□□ -0.37
DDX39A-209	ENST00000589318	CCL13	Q99616	98 aa		12.74	□□□□□ -0.37
DDX39A-209	ENST00000589318	PLEKHF2	Q9H8W4	249 aa		12.74	□□□□□ -0.37
DDX39A-209	ENST00000589318	SDF2L1	Q9HCN8	221 aa		12.74	□□□□□ -0.37
DDX39A-209	ENST00000589318	TMEM106B	Q9NUM4	274 aa		12.74	□□□□□ -0.37
DDX39A-209	ENST00000589318	CDS2	O95674	445 aa		12.74	□□□□□ -0.37
DDX39A-209	ENST00000589318	CEBPG	P53567	150 aa		12.74	□□□□□ -0.37
DDX39A-209	ENST00000589318	TBC1D26	Q86UD7	250 aa		12.74	□□□□□ -0.37
DDX39A-209	ENST00000589318	FAM216B	Q8N7L0	139 aa		12.74	□□□□□ -0.37
DDX39A-209	ENST00000589318	DTD1	Q8TEA8	209 aa		12.74	□□□□□ -0.37
DDX39A-209	ENST00000589318	ZNF665	Q9H7R5	613 aa		12.74	□□□□□ -0.37
DDX39A-209	ENST00000589318	C19orf84	I3L1E1	186 aa		12.73	□□□□□ -0.37
DDX39A-209	ENST00000589318	OR52L2P	Q8NGH6	319 aa		12.73	□□□□□ -0.37
DDX39A-209	ENST00000589318	CCL17	Q92583	94 aa		12.73	□□□□□ -0.37
DDX39A-209	ENST00000589318	NCOR1P1	Q9H4R4	102 aa		12.73	□□□□□ -0.37
DDX39A-209	ENST00000589318	RCL1	Q9Y2P8	373 aa	Known RBP	12.73	□□□□□ -0.37
DDX39A-209	ENST00000589318	C3orf85	A0A1B0GTC6	90 aa		12.72	□□□□□ -0.37
DDX39A-209	ENST00000589318		A0A1B0GV50	99 aa		12.72	□□□□□ -0.37
DDX39A-209	ENST00000589318		A0A1W2PPR1	153 aa		12.72	□□□□□ -0.37
DDX39A-209	ENST00000589318	TNFRSF13B	O14836	293 aa	Predicted RBP	12.72	□□□□□ -0.37
DDX39A-209	ENST00000589318	FCN3	O75636	299 aa		12.72	□□□□□ -0.37
DDX39A-209	ENST00000589318	CGB3	P0DN86	165 aa		12.72	□□□□□ -0.37
DDX39A-209	ENST00000589318	CGB7	P0DN87	165 aa		12.72	□□□□□ -0.37
DDX39A-209	ENST00000589318	TMEM241	Q24JQ0	296 aa		12.72	□□□□□ -0.37
DDX39A-209	ENST00000589318	FAM90A2P	Q658T7	463 aa		12.72	□□□□□ -0.37
DDX39A-209	ENST00000589318	TRAT1	Q6PIZ9	186 aa		12.72	□□□□□ -0.37
DDX39A-209	ENST00000589318	FGFRL1	Q8N441	504 aa		12.72	□□□□□ -0.37
DDX39A-209	ENST00000589318	OR5D13	Q8NGL4	314 aa		12.72	□□□□□ -0.37
DDX39A-209	ENST00000589318	OR4D5	Q8NGN0	318 aa		12.72	□□□□□ -0.37
DDX39A-209	ENST00000589318	SPIN2A	Q99865	258 aa		12.72	□□□□□ -0.37
DDX39A-209	ENST00000589318	SPIN2B	Q9BPZ2	258 aa		12.72	□□□□□ -0.37
DDX39A-209	ENST00000589318	FAM234A	Q9H0X4	552 aa		12.72	□□□□□ -0.37
DDX39A-209	ENST00000589318	TRAV38-1	A0A0B4J264	116 aa		12.72	□□□□□ -0.37
DDX39A-209	ENST00000589318	PHF1	O43189	567 aa	Predicted RBP	12.72	□□□□□ -0.37
DDX39A-209	ENST00000589318	PGLYRP1	O75594	196 aa	Predicted RBP	12.72	□□□□□ -0.37
DDX39A-209	ENST00000589318	IGFBP2	P18065	325 aa		12.72	□□□□□ -0.37
DDX39A-209	ENST00000589318	EDDM3B	P56851	147 aa		12.72	□□□□□ -0.37
DDX39A-209	ENST00000589318	TCF23	Q7RTU1	214 aa		12.72	□□□□□ -0.37
DDX39A-209	ENST00000589318	MRPL41	Q8IXM3	137 aa	Known RBP	12.72	□□□□□ -0.37
DDX39A-209	ENST00000589318	RFESD	Q8TAC1	157 aa		12.72	□□□□□ -0.37
DDX39A-209	ENST00000589318	IMMP2L	Q96T52	175 aa		12.72	□□□□□ -0.37
DDX39A-209	ENST00000589318	AGMAT	Q9BSE5	352 aa		12.72	□□□□□ -0.37
DDX39A-209	ENST00000589318	C11orf1	Q9H5F2	150 aa		12.72	□□□□□ -0.37
DDX39A-209	ENST00000589318	RNF150	Q9ULK6	438 aa		12.72	□□□□□ -0.37
DDX39A-209	ENST00000589318	PPIAL4E	A0A075B759	164 aa		12.71	□□□□□ -0.37
DDX39A-209	ENST00000589318	IGHV1-69-2	A0A0G2JMI3	117 aa		12.71	□□□□□ -0.37
DDX39A-209	ENST00000589318	PPIAL4D	F5H284	164 aa		12.71	□□□□□ -0.37
DDX39A-209	ENST00000589318	PRB1	P04280	392 aa		12.71	□□□□□ -0.37
DDX39A-209	ENST00000589318	PPIAL4F	P0DN26	164 aa		12.71	□□□□□ -0.37
DDX39A-209	ENST00000589318	GZMH	P20718	246 aa		12.71	□□□□□ -0.37
DDX39A-209	ENST00000589318	PPOX	P50336	477 aa		12.71	□□□□□ -0.37
DDX39A-209	ENST00000589318	HTD2	P86397	168 aa		12.71	□□□□□ -0.37
DDX39A-209	ENST00000589318	PMS2P11	Q13670	270 aa		12.71	□□□□□ -0.37
DDX39A-209	ENST00000589318	C11orf71	Q6IPW1	123 aa		12.71	□□□□□ -0.37
DDX39A-209	ENST00000589318	CMTM1	Q8IZ96	169 aa		12.71	□□□□□ -0.37
DDX39A-209	ENST00000589318	TMEM222	Q9H0R3	208 aa		12.71	□□□□□ -0.37
DDX39A-209	ENST00000589318	CBLN4	Q9NTU7	201 aa		12.71	□□□□□ -0.37
DDX39A-209	ENST00000589318	FKBP11	Q9NYL4	201 aa		12.71	□□□□□ -0.37
DDX39A-209	ENST00000589318	PPIAL4A	Q9Y536	164 aa		12.71	□□□□□ -0.37
DDX39A-209	ENST00000589318	TNFSF12	O43508	249 aa		12.7	□□□□□ -0.38
DDX39A-209	ENST00000589318	IFNA1	P01562	189 aa		12.7	□□□□□ -0.38
DDX39A-209	ENST00000589318	PFN1	P07737	140 aa	Known RBP	12.7	□□□□□ -0.38
DDX39A-209	ENST00000589318	LYZL2	Q7Z4W2	148 aa		12.7	□□□□□ -0.38
DDX39A-209	ENST00000589318	CENPV	Q7Z7K6	275 aa	Predicted RBP	12.7	□□□□□ -0.38
DDX39A-209	ENST00000589318	OR5B12	Q96R08	314 aa		12.7	□□□□□ -0.38
DDX39A-209	ENST00000589318	C20orf144	Q9BQM9	153 aa		12.7	□□□□□ -0.38
DDX39A-209	ENST00000589318	GAL3ST2	Q9H3Q3	398 aa		12.7	□□□□□ -0.38
DDX39A-209	ENST00000589318	LYRM2	Q9NU23	88 aa	Predicted RBP	12.7	□□□□□ -0.38
DDX39A-209	ENST00000589318	EPG5	Q9HCE0	2579 aa		12.7	□□□□□ -0.38
DDX39A-209	ENST00000589318	TMPRSS2	O15393	492 aa		12.7	□□□□□ -0.38
DDX39A-209	ENST00000589318	SPINT2	O43291	252 aa		12.7	□□□□□ -0.38
DDX39A-209	ENST00000589318	WNT2	P09544	360 aa		12.7	□□□□□ -0.38
DDX39A-209	ENST00000589318	NPS	P0C0P6	89 aa		12.7	□□□□□ -0.38
DDX39A-209	ENST00000589318	BCL2	P10415	239 aa		12.7	□□□□□ -0.38
DDX39A-209	ENST00000589318	RAB11A	P62491	216 aa		12.7	□□□□□ -0.38
DDX39A-209	ENST00000589318	C5orf30	Q96GV9	206 aa		12.7	□□□□□ -0.38
DDX39A-209	ENST00000589318	TMEM56	Q96MV1	263 aa		12.7	□□□□□ -0.38
DDX39A-209	ENST00000589318	OR6C3	Q9NZP0	311 aa		12.7	□□□□□ -0.38

Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms