RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 ZNF735P0CB33 412 aa10.48□□□□□ -0.73
VMP1-209ENST00000588915 ARL3P36405 182 aa10.48□□□□□ -0.73
VMP1-209ENST00000588915 RPL27AP46776 148 aaKnown RBP10.48□□□□□ -0.73
VMP1-209ENST00000588915 C10orf55Q5SWW7 151 aa10.48□□□□□ -0.73
VMP1-209ENST00000588915 WFDC3Q8IUB2 231 aa10.48□□□□□ -0.73
VMP1-209ENST00000588915 PUSL1Q8N0Z8 303 aaKnown RBP10.48□□□□□ -0.73
VMP1-209ENST00000588915 OR52B4Q8NGK2 314 aa10.48□□□□□ -0.73
VMP1-209ENST00000588915 OR4S2Q8NH73 311 aa10.48□□□□□ -0.73
VMP1-209ENST00000588915 TMEM167AQ8TBQ9 72 aa10.48□□□□□ -0.73
VMP1-209ENST00000588915 MARC2Q969Z3 335 aa10.48□□□□□ -0.73
VMP1-209ENST00000588915 OVOL2Q9BRP0 275 aa10.48□□□□□ -0.73
VMP1-209ENST00000588915 AIFM2Q9BRQ8 373 aa10.48□□□□□ -0.73
VMP1-209ENST00000588915 TP53TG1Q9Y2A0 90 aa10.48□□□□□ -0.73
VMP1-209ENST00000588915 RBMX2Q9Y388 322 aaKnown RBP10.48□□□□□ -0.73
VMP1-209ENST00000588915 IGKV1D-8A0A087WSZ0 117 aa10.47□□□□□ -0.73
VMP1-209ENST00000588915 TMEM213A2RRL7 107 aa10.47□□□□□ -0.73
VMP1-209ENST00000588915 HMX3A6NHT5 357 aa10.47□□□□□ -0.73
VMP1-209ENST00000588915 KBTBD11O94819 623 aa10.47□□□□□ -0.73
VMP1-209ENST00000588915 NDUFB8O95169 186 aa10.47□□□□□ -0.73
VMP1-209ENST00000588915 HLA-AP01891 365 aaKnown RBP10.47□□□□□ -0.73
VMP1-209ENST00000588915 ATF4P18848 351 aaPredicted RBP10.47□□□□□ -0.73
VMP1-209ENST00000588915 GALP22466 123 aa10.47□□□□□ -0.73
VMP1-209ENST00000588915 PSMB6P28072 239 aa10.47□□□□□ -0.73
VMP1-209ENST00000588915 RPL30P62888 115 aaKnown RBP10.47□□□□□ -0.73
VMP1-209ENST00000588915 CNIH2Q6PI25 160 aa10.47□□□□□ -0.73
VMP1-209ENST00000588915 CLEC19AQ6UXS0 136 aa10.47□□□□□ -0.73
VMP1-209ENST00000588915 ZNF66Q6ZN08 573 aa10.47□□□□□ -0.73
VMP1-209ENST00000588915 TMEM61Q8N0U2 210 aa10.47□□□□□ -0.73
VMP1-209ENST00000588915 UXS1Q8NBZ7 420 aa10.47□□□□□ -0.73
VMP1-209ENST00000588915 EEF1AKMT3Q96AZ1 226 aa10.47□□□□□ -0.73
VMP1-209ENST00000588915 CXorf58Q96LI9 332 aa10.47□□□□□ -0.73
VMP1-209ENST00000588915 CCDC140Q96MF4 163 aa10.47□□□□□ -0.73
VMP1-209ENST00000588915 TRBV7-1A0A0A6YYK4 115 aa10.46□□□□□ -0.73
VMP1-209ENST00000588915 NUPR2A6NF83 97 aa10.46□□□□□ -0.73
VMP1-209ENST00000588915 E7EUB6 86 aa10.46□□□□□ -0.73
VMP1-209ENST00000588915 HRASP01112 189 aa10.46□□□□□ -0.73
VMP1-209ENST00000588915 IGLV2-14P01704 120 aa10.46□□□□□ -0.73
VMP1-209ENST00000588915 C8orf88P0DMB2 117 aa10.46□□□□□ -0.73
VMP1-209ENST00000588915 CTRB1P17538 263 aa10.46□□□□□ -0.73
VMP1-209ENST00000588915 RAB3BP20337 219 aa10.46□□□□□ -0.73
VMP1-209ENST00000588915 EDN2P20800 178 aa10.46□□□□□ -0.73
VMP1-209ENST00000588915 ELLP55199 621 aaPredicted RBP10.46□□□□□ -0.73
VMP1-209ENST00000588915 TNFRSF9Q07011 255 aa10.46□□□□□ -0.73
VMP1-209ENST00000588915 CDNFQ49AH0 187 aa10.46□□□□□ -0.73
VMP1-209ENST00000588915 CTRB2Q6GPI1 263 aa10.46□□□□□ -0.73
VMP1-209ENST00000588915 VKORC1L1Q8N0U8 176 aa10.46□□□□□ -0.73
VMP1-209ENST00000588915 ST6GALNAC5Q9BVH7 336 aa10.46□□□□□ -0.73
VMP1-209ENST00000588915 MRPL27Q9P0M9 148 aaKnown RBP10.46□□□□□ -0.73
VMP1-209ENST00000588915 MLXQ9UH92 298 aa10.46□□□□□ -0.73
VMP1-209ENST00000588915 ZNF320A2RRD8 509 aa10.45□□□□□ -0.74
VMP1-209ENST00000588915 SCGNO76038 276 aa10.45□□□□□ -0.74
VMP1-209ENST00000588915 CRHBPP24387 322 aa10.45□□□□□ -0.74
VMP1-209ENST00000588915 MYL9P24844 172 aa10.45□□□□□ -0.74
VMP1-209ENST00000588915 OR10A3P58181 314 aa10.45□□□□□ -0.74
VMP1-209ENST00000588915 RPL8P62917 257 aaKnown RBP10.45□□□□□ -0.74
VMP1-209ENST00000588915 EIF4EBP1Q13541 118 aaPredicted RBP10.45□□□□□ -0.74
VMP1-209ENST00000588915 HACD4Q5VWC8 232 aa10.45□□□□□ -0.74
VMP1-209ENST00000588915 Q6ZWC4 215 aa10.45□□□□□ -0.74
VMP1-209ENST00000588915 MFSD4AQ8N468 514 aa10.45□□□□□ -0.74
VMP1-209ENST00000588915 OR4A5Q8NH83 315 aa10.45□□□□□ -0.74
VMP1-209ENST00000588915 CACNG8Q8WXS5 425 aa10.45□□□□□ -0.74
VMP1-209ENST00000588915 CCDC90BQ9GZT6 254 aa10.45□□□□□ -0.74
VMP1-209ENST00000588915 ATG5Q9H1Y0 275 aa10.45□□□□□ -0.74
VMP1-209ENST00000588915 BET1LQ9NYM9 111 aa10.45□□□□□ -0.74
VMP1-209ENST00000588915 IGLV11-55A0A075B6I3 123 aa10.44□□□□□ -0.74
VMP1-209ENST00000588915 A0A1B0GW64 132 aa10.44□□□□□ -0.74
VMP1-209ENST00000588915 TRDV1A0A1B0GX56 115 aa10.44□□□□□ -0.74
VMP1-209ENST00000588915 J3QRK9 145 aa10.44□□□□□ -0.74
VMP1-209ENST00000588915 UBE2CO00762 179 aa10.44□□□□□ -0.74
VMP1-209ENST00000588915 DEFA4P12838 97 aa10.44□□□□□ -0.74
VMP1-209ENST00000588915 NFYAP23511 347 aaPredicted RBP10.44□□□□□ -0.74
VMP1-209ENST00000588915 BMI1P35226 326 aa10.44□□□□□ -0.74
VMP1-209ENST00000588915 APOC4P55056 127 aa10.44□□□□□ -0.74
VMP1-209ENST00000588915 BRWD1-AS2P59051 145 aa10.44□□□□□ -0.74
VMP1-209ENST00000588915 MSMO1Q15800 293 aa10.44□□□□□ -0.74
VMP1-209ENST00000588915 TBCEQ15813 527 aaPredicted RBP10.44□□□□□ -0.74
VMP1-209ENST00000588915 TM4SF20Q53R12 229 aa10.44□□□□□ -0.74
VMP1-209ENST00000588915 RBPMS2Q6ZRY4 209 aaKnown RBP10.44□□□□□ -0.74
VMP1-209ENST00000588915 SLC38A6Q8IZM9 456 aa10.44□□□□□ -0.74
VMP1-209ENST00000588915 TCTEX1D2Q8WW35 142 aa10.44□□□□□ -0.74
VMP1-209ENST00000588915 SRSF8Q9BRL6 282 aaKnown RBP10.44□□□□□ -0.74
VMP1-209ENST00000588915 IGKV1D-13A0A0B4J2D9 117 aa10.43□□□□□ -0.74
VMP1-209ENST00000588915 SCAF4O95104 1147 aaKnown RBP10.43□□□□□ -0.74
VMP1-209ENST00000588915 LY6G6CO95867 125 aa10.43□□□□□ -0.74
VMP1-209ENST00000588915 CLEC3BP05452 202 aa10.43□□□□□ -0.74
VMP1-209ENST00000588915 FGF2P09038 288 aa10.43□□□□□ -0.74
VMP1-209ENST00000588915 IGKV1-13P0DP09 117 aa10.43□□□□□ -0.74
VMP1-209ENST00000588915 MYOD1P15172 320 aa10.43□□□□□ -0.74
VMP1-209ENST00000588915 OR2B11Q5JQS5 317 aa10.43□□□□□ -0.74
VMP1-209ENST00000588915 BTNL8Q6UX41 500 aa10.43□□□□□ -0.74
VMP1-209ENST00000588915 ZNF367Q7RTV3 350 aa10.43□□□□□ -0.74
VMP1-209ENST00000588915 OR2C3Q8N628 320 aa10.43□□□□□ -0.74
VMP1-209ENST00000588915 ZBTB34Q8NCN2 500 aa10.43□□□□□ -0.74
VMP1-209ENST00000588915 OR1L6Q8NGR2 347 aa10.43□□□□□ -0.74
VMP1-209ENST00000588915 C5orf66Q9H5L9 145 aa10.43□□□□□ -0.74
VMP1-209ENST00000588915 THYN1Q9P016 225 aa10.43□□□□□ -0.74
VMP1-209ENST00000588915 ANXA10Q9UJ72 324 aa10.43□□□□□ -0.74
VMP1-209ENST00000588915 ELF5Q9UKW6 265 aaPredicted RBP10.43□□□□□ -0.74
VMP1-209ENST00000588915 SPATA2Q9UM82 520 aa10.43□□□□□ -0.74
VMP1-209ENST00000588915 UFC1Q9Y3C8 167 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms