RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 IGKV1D-33P01593 117 aa16.08■□□□□ 0.17
ATG4D-208ENST00000588667 IGKV1-33P01594 117 aa16.08■□□□□ 0.17
ATG4D-208ENST00000588667 CD1BP29016 333 aa16.08■□□□□ 0.17
ATG4D-208ENST00000588667 HES1Q14469 280 aa16.08■□□□□ 0.17
ATG4D-208ENST00000588667 ZNF585BQ52M93 769 aa16.08■□□□□ 0.17
ATG4D-208ENST00000588667 SPAG16Q8N0X2 631 aa16.08■□□□□ 0.17
ATG4D-208ENST00000588667 OR4C13Q8NGP0 309 aa16.08■□□□□ 0.17
ATG4D-208ENST00000588667 ADTRPQ96IZ2 230 aa16.08■□□□□ 0.17
ATG4D-208ENST00000588667 RBM14Q96PK6 669 aaKnown RBP16.08■□□□□ 0.17
ATG4D-208ENST00000588667 ZNF251Q9BRH9 671 aa16.08■□□□□ 0.17
ATG4D-208ENST00000588667 SLC25A33Q9BSK2 321 aa16.08■□□□□ 0.17
ATG4D-208ENST00000588667 MRPL20Q9BYC9 149 aaKnown RBP16.08■□□□□ 0.17
ATG4D-208ENST00000588667 GSKIPQ9P0R6 139 aa16.08■□□□□ 0.17
ATG4D-208ENST00000588667 MMP24Q9Y5R2 645 aa16.08■□□□□ 0.17
ATG4D-208ENST00000588667 IGHV3-72A0A0B4J1Y9 119 aa16.08■□□□□ 0.16
ATG4D-208ENST00000588667 SNAPC5O75971 98 aa16.08■□□□□ 0.16
ATG4D-208ENST00000588667 ATG12O94817 140 aa16.08■□□□□ 0.16
ATG4D-208ENST00000588667 PSMB6P28072 239 aa16.08■□□□□ 0.16
ATG4D-208ENST00000588667 EBI3Q14213 229 aa16.08■□□□□ 0.16
ATG4D-208ENST00000588667 LRRC37A5PQ49AS3 106 aa16.08■□□□□ 0.16
ATG4D-208ENST00000588667 C16orf95Q9H693 158 aa16.08■□□□□ 0.16
ATG4D-208ENST00000588667 PRELID3BQ9Y3B1 194 aa16.08■□□□□ 0.16
ATG4D-208ENST00000588667 LINC00473A8K010 186 aa16.07■□□□□ 0.16
ATG4D-208ENST00000588667 TMEM11P17152 192 aa16.07■□□□□ 0.16
ATG4D-208ENST00000588667 MDKP21741 143 aaPredicted RBP16.07■□□□□ 0.16
ATG4D-208ENST00000588667 KIR2DS2P43631 304 aa16.07■□□□□ 0.16
ATG4D-208ENST00000588667 LPAR6P43657 344 aa16.07■□□□□ 0.16
ATG4D-208ENST00000588667 THBS3P49746 956 aa16.07■□□□□ 0.16
ATG4D-208ENST00000588667 THOC7Q6I9Y2 204 aaKnown RBP16.07■□□□□ 0.16
ATG4D-208ENST00000588667 C12orf54Q6X4T0 127 aa16.07■□□□□ 0.16
ATG4D-208ENST00000588667 ZBTB8BQ8NAP8 495 aaPredicted RBP16.07■□□□□ 0.16
ATG4D-208ENST00000588667 RNASE11Q8TAA1 199 aaKnown RBP16.07■□□□□ 0.16
ATG4D-208ENST00000588667 THAP6Q8TBB0 222 aa16.07■□□□□ 0.16
ATG4D-208ENST00000588667 NABP2Q9BQ15 211 aa16.07■□□□□ 0.16
ATG4D-208ENST00000588667 TRAV14DV4A0A0A6YYC5 116 aa16.06■□□□□ 0.16
ATG4D-208ENST00000588667 MPC2O95563 127 aa16.06■□□□□ 0.16
ATG4D-208ENST00000588667 PET100P0DJ07 73 aa16.06■□□□□ 0.16
ATG4D-208ENST00000588667 IL15RAQ13261 267 aa16.06■□□□□ 0.16
ATG4D-208ENST00000588667 NMSQ5H8A3 153 aa16.06■□□□□ 0.16
ATG4D-208ENST00000588667 OR2B11Q5JQS5 317 aa16.06■□□□□ 0.16
ATG4D-208ENST00000588667 C11orf87Q6NUJ2 197 aa16.06■□□□□ 0.16
ATG4D-208ENST00000588667 DRAXINQ8NBI3 349 aaPredicted RBP16.06■□□□□ 0.16
ATG4D-208ENST00000588667 OR2T10Q8NGZ9 312 aa16.06■□□□□ 0.16
ATG4D-208ENST00000588667 LSM10Q969L4 123 aaKnown RBP16.06■□□□□ 0.16
ATG4D-208ENST00000588667 ZFP57Q9NU63 452 aa16.06■□□□□ 0.16
ATG4D-208ENST00000588667 FXYD6-FXYD2A0A087WZ82 144 aa16.05■□□□□ 0.16
ATG4D-208ENST00000588667 HMSDA8MTL9 139 aa16.05■□□□□ 0.16
ATG4D-208ENST00000588667 RBFOX2O43251 390 aaKnown RBP eCLIP16.05■□□□□ 0.16
ATG4D-208ENST00000588667 RAMP3O60896 148 aa16.05■□□□□ 0.16
ATG4D-208ENST00000588667 AKR1C2P52895 323 aa16.05■□□□□ 0.16
ATG4D-208ENST00000588667 LINC01006Q8NI28 216 aa16.05■□□□□ 0.16
ATG4D-208ENST00000588667 GRPEL2Q8TAA5 225 aa16.05■□□□□ 0.16
ATG4D-208ENST00000588667 RRNAD1Q96FB5 475 aaKnown RBP16.05■□□□□ 0.16
ATG4D-208ENST00000588667 EAF1Q96JC9 268 aaPredicted RBP16.05■□□□□ 0.16
ATG4D-208ENST00000588667 MOB4Q9Y3A3 225 aa16.05■□□□□ 0.16
ATG4D-208ENST00000588667 ANK2Q01484 3957 aa16.05■□□□□ 0.16
ATG4D-208ENST00000588667 CLPSL1A2RUU4 121 aa16.05■□□□□ 0.16
ATG4D-208ENST00000588667 M0QZK8 103 aa16.05■□□□□ 0.16
ATG4D-208ENST00000588667 MOSP00540 346 aa16.05■□□□□ 0.16
ATG4D-208ENST00000588667 IGKV1-39P01597 117 aa16.05■□□□□ 0.16
ATG4D-208ENST00000588667 IGKV1D-39P04432 117 aa16.05■□□□□ 0.16
ATG4D-208ENST00000588667 SLC25A4P12235 298 aa16.05■□□□□ 0.16
ATG4D-208ENST00000588667 C9orf62Q8N4C0 152 aa16.05■□□□□ 0.16
ATG4D-208ENST00000588667 Q8N6K4 173 aa16.05■□□□□ 0.16
ATG4D-208ENST00000588667 DNHD1Q96M86 4753 aa16.04■□□□□ 0.16
ATG4D-208ENST00000588667 FCGR3BO75015 233 aa16.04■□□□□ 0.16
ATG4D-208ENST00000588667 CT45A6P0DMU7 189 aa16.04■□□□□ 0.16
ATG4D-208ENST00000588667 CT45A5P0DMU8 189 aa16.04■□□□□ 0.16
ATG4D-208ENST00000588667 CT45A7P0DMV0 189 aa16.04■□□□□ 0.16
ATG4D-208ENST00000588667 SLC25A6P12236 298 aa16.04■□□□□ 0.16
ATG4D-208ENST00000588667 BRWD1-AS2P59051 145 aa16.04■□□□□ 0.16
ATG4D-208ENST00000588667 HNF4GQ14541 408 aa16.04■□□□□ 0.16
ATG4D-208ENST00000588667 FAM219AQ8IW50 185 aa16.04■□□□□ 0.16
ATG4D-208ENST00000588667 Q8N2B8 174 aa16.04■□□□□ 0.16
ATG4D-208ENST00000588667 DDB2Q92466 427 aa16.04■□□□□ 0.16
ATG4D-208ENST00000588667 PRSS22Q9GZN4 317 aa16.04■□□□□ 0.16
ATG4D-208ENST00000588667 ZNF702PQ9H963 129 aa16.04■□□□□ 0.16
ATG4D-208ENST00000588667 HSPB11Q9Y547 144 aa16.04■□□□□ 0.16
ATG4D-208ENST00000588667 A0A1B0GU03 582 aa16.03■□□□□ 0.16
ATG4D-208ENST00000588667 HPRT1P00492 218 aa16.03■□□□□ 0.16
ATG4D-208ENST00000588667 LINC00205P59089 165 aa16.03■□□□□ 0.16
ATG4D-208ENST00000588667 RAB32Q13637 225 aa16.03■□□□□ 0.16
ATG4D-208ENST00000588667 TMEM65Q6PI78 240 aa16.03■□□□□ 0.16
ATG4D-208ENST00000588667 OR4S2Q8NH73 311 aa16.03■□□□□ 0.16
ATG4D-208ENST00000588667 OR2T6Q8NHC8 308 aa16.03■□□□□ 0.16
ATG4D-208ENST00000588667 PLEKHA2Q9HB19 425 aa16.03■□□□□ 0.16
ATG4D-208ENST00000588667 ARPC5O15511 151 aa16.02■□□□□ 0.16
ATG4D-208ENST00000588667 FGF16O43320 207 aa16.02■□□□□ 0.16
ATG4D-208ENST00000588667 S1PR2O95136 353 aa16.02■□□□□ 0.16
ATG4D-208ENST00000588667 S100A10P60903 97 aa16.02■□□□□ 0.16
ATG4D-208ENST00000588667 BLCAPP62952 87 aa16.02■□□□□ 0.16
ATG4D-208ENST00000588667 SMCO1Q147U7 214 aa16.02■□□□□ 0.16
ATG4D-208ENST00000588667 LAMTOR1Q6IAA8 161 aa16.02■□□□□ 0.16
ATG4D-208ENST00000588667 PRSS54Q6PEW0 395 aa16.02■□□□□ 0.16
ATG4D-208ENST00000588667 ZNF546Q86UE3 836 aa16.02■□□□□ 0.16
ATG4D-208ENST00000588667 OR8H1Q8NGG4 311 aa16.02■□□□□ 0.16
ATG4D-208ENST00000588667 OR5AN1Q8NGI8 311 aa16.02■□□□□ 0.16
ATG4D-208ENST00000588667 MBD2Q9UBB5 411 aa16.02■□□□□ 0.16
ATG4D-208ENST00000588667 RNF114Q9Y508 228 aa16.02■□□□□ 0.16
ATG4D-208ENST00000588667 SCGB1D2O95969 90 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms