RNA–Protein interactions for RNA: ENST00000587928.5

ILF3-208, Transcript of interleukin enhancer binding factor 3, human

TSL 2

Gene ILF3, Length 4,230 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ILF3-208	ENST00000587928	C19orf35	Q6ZS72	473 aa		9.23	□□□□□ -0.93
ILF3-208	ENST00000587928	C1orf174	Q8IYL3	243 aa		9.23	□□□□□ -0.93
ILF3-208	ENST00000587928	OSR2	Q8N2R0	312 aa		9.23	□□□□□ -0.93
ILF3-208	ENST00000587928	FER1L6-AS1	Q8NA97	138 aa		9.23	□□□□□ -0.93
ILF3-208	ENST00000587928	APOBEC3D	Q96AK3	386 aa	Predicted RBP	9.23	□□□□□ -0.93
ILF3-208	ENST00000587928	POM121L2	Q96KW2	1035 aa		9.23	□□□□□ -0.93
ILF3-208	ENST00000587928	VPS13C	Q709C8	3753 aa		9.23	□□□□□ -0.93
ILF3-208	ENST00000587928	RAI1	Q7Z5J4	1906 aa	Predicted RBP	9.22	□□□□□ -0.93
ILF3-208	ENST00000587928	TRGV5	A0A0B4J1U4	118 aa		9.22	□□□□□ -0.93
ILF3-208	ENST00000587928	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	9.22	□□□□□ -0.93
ILF3-208	ENST00000587928	SPRY1	O43609	319 aa	Predicted RBP	9.22	□□□□□ -0.93
ILF3-208	ENST00000587928	PF4V1	P10720	104 aa		9.22	□□□□□ -0.93
ILF3-208	ENST00000587928	MAGEA5	P43359	124 aa		9.22	□□□□□ -0.93
ILF3-208	ENST00000587928	FAM219A	Q8IW50	185 aa		9.22	□□□□□ -0.93
ILF3-208	ENST00000587928	LGI3	Q8N145	548 aa		9.22	□□□□□ -0.93
ILF3-208	ENST00000587928	OR5A1	Q8NGJ0	315 aa		9.22	□□□□□ -0.93
ILF3-208	ENST00000587928	OR1N2	Q8NGR9	330 aa		9.22	□□□□□ -0.93
ILF3-208	ENST00000587928	CHRDL1	Q9BU40	450 aa		9.22	□□□□□ -0.93
ILF3-208	ENST00000587928	MANBAL	Q9NQG1	85 aa		9.22	□□□□□ -0.93
ILF3-208	ENST00000587928	CDX4	O14627	284 aa	Predicted RBP	9.22	□□□□□ -0.93
ILF3-208	ENST00000587928	ZNF728	P0DKX0	622 aa		9.22	□□□□□ -0.93
ILF3-208	ENST00000587928	F2R	P25116	425 aa		9.22	□□□□□ -0.93
ILF3-208	ENST00000587928	SRPX	P78539	464 aa		9.22	□□□□□ -0.93
ILF3-208	ENST00000587928	CALHM1	Q8IU99	346 aa		9.22	□□□□□ -0.93
ILF3-208	ENST00000587928	FAM222B	Q8WU58	562 aa		9.22	□□□□□ -0.93
ILF3-208	ENST00000587928	SIGLEC12	Q96PQ1	595 aa		9.22	□□□□□ -0.93
ILF3-208	ENST00000587928	GEMIN7	Q9H840	131 aa	Known RBP	9.22	□□□□□ -0.93
ILF3-208	ENST00000587928	ANXA10	Q9UJ72	324 aa		9.22	□□□□□ -0.93
ILF3-208	ENST00000587928	LOC105371242	A0A075B767	164 aa		9.22	□□□□□ -0.93
ILF3-208	ENST00000587928	ERVK11-1	P61568	191 aa		9.22	□□□□□ -0.93
ILF3-208	ENST00000587928	ZNF766	Q5HY98	468 aa		9.22	□□□□□ -0.93
ILF3-208	ENST00000587928	AMMECR1L	Q6DCA0	310 aa		9.22	□□□□□ -0.93
ILF3-208	ENST00000587928	ST6GALNAC3	Q8NDV1	305 aa		9.22	□□□□□ -0.93
ILF3-208	ENST00000587928	GMPPA	Q96IJ6	420 aa	Predicted RBP	9.22	□□□□□ -0.93
ILF3-208	ENST00000587928	HDHD3	Q9BSH5	251 aa	Predicted RBP	9.22	□□□□□ -0.93
ILF3-208	ENST00000587928	CISD1	Q9NZ45	108 aa	Known RBP	9.22	□□□□□ -0.93
ILF3-208	ENST00000587928	RNF115	Q9Y4L5	304 aa		9.22	□□□□□ -0.93
ILF3-208	ENST00000587928	ANKRD11	Q6UB99	2663 aa	Predicted RBP	9.21	□□□□□ -0.93
ILF3-208	ENST00000587928	SP1	P08047	785 aa		9.21	□□□□□ -0.93
ILF3-208	ENST00000587928	ATP5S	Q99766	215 aa		9.21	□□□□□ -0.93
ILF3-208	ENST00000587928	TTTY12	Q9BZ98	90 aa		9.21	□□□□□ -0.93
ILF3-208	ENST00000587928	SDF2L1	Q9HCN8	221 aa		9.21	□□□□□ -0.93
ILF3-208	ENST00000587928	DMXL2	Q8TDJ6	3036 aa		9.21	□□□□□ -0.93
ILF3-208	ENST00000587928	NKX2-6	A6NCS4	301 aa		9.21	□□□□□ -0.94
ILF3-208	ENST00000587928	C17orf112	F2Z3M2	114 aa		9.21	□□□□□ -0.94
ILF3-208	ENST00000587928	BCL2	P10415	239 aa		9.21	□□□□□ -0.94
ILF3-208	ENST00000587928	CD59	P13987	128 aa		9.21	□□□□□ -0.94
ILF3-208	ENST00000587928	TSPO2	Q5TGU0	170 aa		9.21	□□□□□ -0.94
ILF3-208	ENST00000587928	TUSC5	Q8IXB3	177 aa		9.21	□□□□□ -0.94
ILF3-208	ENST00000587928	UBE2J1	Q9Y385	318 aa	Predicted RBP	9.21	□□□□□ -0.94
ILF3-208	ENST00000587928	TBL2	Q9Y4P3	447 aa	Known RBP	9.21	□□□□□ -0.94
ILF3-208	ENST00000587928	TRAV26-1	A0A087WT03	109 aa		9.21	□□□□□ -0.94
ILF3-208	ENST00000587928	MDH2	P40926	338 aa	Known RBP	9.21	□□□□□ -0.94
ILF3-208	ENST00000587928	ACTL10	Q5JWF8	245 aa		9.21	□□□□□ -0.94
ILF3-208	ENST00000587928	MRGPRG	Q86SM5	289 aa		9.21	□□□□□ -0.94
ILF3-208	ENST00000587928	CNEP1R1	Q8N9A8	125 aa		9.21	□□□□□ -0.94
ILF3-208	ENST00000587928	OR1K1	Q8NGR3	316 aa		9.21	□□□□□ -0.94
ILF3-208	ENST00000587928	KCNS2	Q9ULS6	477 aa		9.21	□□□□□ -0.94
ILF3-208	ENST00000587928	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	9.2	□□□□□ -0.94
ILF3-208	ENST00000587928	CNIH1	O95406	144 aa		9.2	□□□□□ -0.94
ILF3-208	ENST00000587928	PI3	P19957	117 aa		9.2	□□□□□ -0.94
ILF3-208	ENST00000587928	GZMH	P20718	246 aa		9.2	□□□□□ -0.94
ILF3-208	ENST00000587928	TSPO	P30536	169 aa		9.2	□□□□□ -0.94
ILF3-208	ENST00000587928	NMS	Q5H8A3	153 aa		9.2	□□□□□ -0.94
ILF3-208	ENST00000587928	MRPL54	Q6P161	138 aa	Known RBP	9.2	□□□□□ -0.94
ILF3-208	ENST00000587928	C6orf201	Q7Z4U5	140 aa		9.2	□□□□□ -0.94
ILF3-208	ENST00000587928	ZDHHC23	Q8IYP9	409 aa		9.2	□□□□□ -0.94
ILF3-208	ENST00000587928	FBXL14	Q8N1E6	418 aa		9.2	□□□□□ -0.94
ILF3-208	ENST00000587928	DEFB124	Q8NES8	71 aa		9.2	□□□□□ -0.94
ILF3-208	ENST00000587928	HES4	Q9HCC6	221 aa		9.2	□□□□□ -0.94
ILF3-208	ENST00000587928	PRR13	Q9NZ81	148 aa		9.2	□□□□□ -0.94
ILF3-208	ENST00000587928	RCL1	Q9Y2P8	373 aa	Known RBP	9.2	□□□□□ -0.94
ILF3-208	ENST00000587928	OPRM1	P35372	400 aa		9.2	□□□□□ -0.94
ILF3-208	ENST00000587928	CLEC12B	Q2HXU8	276 aa		9.2	□□□□□ -0.94
ILF3-208	ENST00000587928	TBC1D28	Q2M2D7	210 aa		9.2	□□□□□ -0.94
ILF3-208	ENST00000587928	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	9.2	□□□□□ -0.94
ILF3-208	ENST00000587928	SHANK1	Q9Y566	2161 aa		9.2	□□□□□ -0.94
ILF3-208	ENST00000587928	LOC102723971	A0A1B0GUV8	181 aa		9.2	□□□□□ -0.94
ILF3-208	ENST00000587928	ZNF205	O95201	554 aa		9.2	□□□□□ -0.94
ILF3-208	ENST00000587928	KITLG	P21583	273 aa		9.2	□□□□□ -0.94
ILF3-208	ENST00000587928	ASCL1	P50553	236 aa		9.2	□□□□□ -0.94
ILF3-208	ENST00000587928	RBM11	P57052	281 aa	Known RBP	9.2	□□□□□ -0.94
ILF3-208	ENST00000587928	C5orf64	Q2M2E5	130 aa		9.2	□□□□□ -0.94
ILF3-208	ENST00000587928	IGFL2	Q6UWQ7	119 aa		9.2	□□□□□ -0.94
ILF3-208	ENST00000587928	WFDC8	Q8IUA0	241 aa		9.2	□□□□□ -0.94
ILF3-208	ENST00000587928	TMEM251	Q8N6I4	163 aa		9.2	□□□□□ -0.94
ILF3-208	ENST00000587928	ZNF611	Q8N823	705 aa		9.2	□□□□□ -0.94
ILF3-208	ENST00000587928	RHOG	P84095	191 aa		9.2	□□□□□ -0.94
ILF3-208	ENST00000587928	C17orf78	Q8N4C9	275 aa		9.2	□□□□□ -0.94
ILF3-208	ENST00000587928	OR2V2	Q96R30	315 aa		9.2	□□□□□ -0.94
ILF3-208	ENST00000587928	GTSF1L	Q9H1H1	148 aa		9.2	□□□□□ -0.94
ILF3-208	ENST00000587928	SLC39A9	Q9NUM3	307 aa		9.2	□□□□□ -0.94
ILF3-208	ENST00000587928	AZU1	P20160	251 aa		9.19	□□□□□ -0.94
ILF3-208	ENST00000587928	FAM78B	Q5VT40	261 aa		9.19	□□□□□ -0.94
ILF3-208	ENST00000587928	GPR146	Q96CH1	333 aa		9.19	□□□□□ -0.94
ILF3-208	ENST00000587928	PLEKHF2	Q9H8W4	249 aa		9.19	□□□□□ -0.94
ILF3-208	ENST00000587928	DOCK7	Q96N67	2140 aa		9.19	□□□□□ -0.94
ILF3-208	ENST00000587928	MED13	Q9UHV7	2174 aa		9.19	□□□□□ -0.94
ILF3-208	ENST00000587928	AKAP13	Q12802	2813 aa		9.19	□□□□□ -0.94
ILF3-208	ENST00000587928	FTH1P19	P0C7X4	201 aa		9.19	□□□□□ -0.94

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