RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 OR4A16Q8NH70 328 aa13.68□□□□□ -0.22
RANBP3-209ENST00000587411 BCL2L2Q92843 193 aaPredicted RBP13.68□□□□□ -0.22
RANBP3-209ENST00000587411 KCNS1Q96KK3 526 aa13.68□□□□□ -0.22
RANBP3-209ENST00000587411 TBL2Q9Y4P3 447 aaKnown RBP13.68□□□□□ -0.22
RANBP3-209ENST00000587411 AQP7O14520 342 aa13.67□□□□□ -0.22
RANBP3-209ENST00000587411 CELA3AP09093 270 aa13.67□□□□□ -0.22
RANBP3-209ENST00000587411 VDAC2P45880 294 aaPredicted RBP13.67□□□□□ -0.22
RANBP3-209ENST00000587411 SPATA45Q537H7 98 aa13.67□□□□□ -0.22
RANBP3-209ENST00000587411 PRAMEF5Q5TYX0 476 aa13.67□□□□□ -0.22
RANBP3-209ENST00000587411 PRAMEF6Q5VXH4 476 aa13.67□□□□□ -0.22
RANBP3-209ENST00000587411 MRGPRDQ8TDS7 321 aa13.67□□□□□ -0.22
RANBP3-209ENST00000587411 FSCN3Q9NQT6 498 aa13.67□□□□□ -0.22
RANBP3-209ENST00000587411 ARHGAP21Q5T5U3 1957 aa13.67□□□□□ -0.22
RANBP3-209ENST00000587411 ZNF253O75346 499 aa13.67□□□□□ -0.22
RANBP3-209ENST00000587411 REG1AP05451 166 aa13.67□□□□□ -0.22
RANBP3-209ENST00000587411 GRPP07492 148 aa13.67□□□□□ -0.22
RANBP3-209ENST00000587411 GABRA2P47869 451 aa13.67□□□□□ -0.22
RANBP3-209ENST00000587411 NPVFQ9HCQ7 196 aa13.67□□□□□ -0.22
RANBP3-209ENST00000587411 NRN1Q9NPD7 142 aa13.67□□□□□ -0.22
RANBP3-209ENST00000587411 LSM4Q9Y4Z0 139 aaKnown RBP13.67□□□□□ -0.22
RANBP3-209ENST00000587411 CX3CL1P78423 397 aa13.67□□□□□ -0.22
RANBP3-209ENST00000587411 ZXDAP98168 799 aa13.67□□□□□ -0.22
RANBP3-209ENST00000587411 OR8I2Q8N0Y5 310 aa13.67□□□□□ -0.22
RANBP3-209ENST00000587411 PRR7Q8TB68 274 aa13.67□□□□□ -0.22
RANBP3-209ENST00000587411 COQ2Q96H96 371 aa13.67□□□□□ -0.22
RANBP3-209ENST00000587411 FAM103A1Q9BTL3 118 aaKnown RBP13.67□□□□□ -0.22
RANBP3-209ENST00000587411 DNAJC4Q9NNZ3 241 aa13.67□□□□□ -0.22
RANBP3-209ENST00000587411 NAT8BQ9UHF3 227 aa13.67□□□□□ -0.22
RANBP3-209ENST00000587411 PSG11Q9UQ72 335 aa13.67□□□□□ -0.22
RANBP3-209ENST00000587411 PRUNE2Q8WUY3 3088 aa13.66□□□□□ -0.22
RANBP3-209ENST00000587411 SMPD2O60906 423 aa13.66□□□□□ -0.22
RANBP3-209ENST00000587411 OR5G3P0C626 314 aa13.66□□□□□ -0.22
RANBP3-209ENST00000587411 TFPI2P48307 235 aa13.66□□□□□ -0.22
RANBP3-209ENST00000587411 PCP4P48539 62 aa13.66□□□□□ -0.22
RANBP3-209ENST00000587411 AMTP48728 403 aa13.66□□□□□ -0.22
RANBP3-209ENST00000587411 SSPNQ14714 243 aa13.66□□□□□ -0.22
RANBP3-209ENST00000587411 EFNB3Q15768 340 aa13.66□□□□□ -0.22
RANBP3-209ENST00000587411 FBXW9Q5XUX1 488 aa13.66□□□□□ -0.22
RANBP3-209ENST00000587411 ST6GALNAC3Q8NDV1 305 aa13.66□□□□□ -0.22
RANBP3-209ENST00000587411 R4GN57 208 aa13.66□□□□□ -0.22
RANBP3-209ENST00000587411 SDK1Q7Z5N4 2213 aa13.66□□□□□ -0.22
RANBP3-209ENST00000587411 IQCF6A8MYZ5 107 aa13.66□□□□□ -0.22
RANBP3-209ENST00000587411 TDGF1P13385 188 aa13.66□□□□□ -0.22
RANBP3-209ENST00000587411 FOXF2Q12947 444 aa13.66□□□□□ -0.22
RANBP3-209ENST00000587411 STARD4Q96DR4 205 aa13.66□□□□□ -0.22
RANBP3-209ENST00000587411 RNF114Q9Y508 228 aa13.66□□□□□ -0.22
RANBP3-209ENST00000587411 CACNA1EQ15878 2313 aa13.65□□□□□ -0.22
RANBP3-209ENST00000587411 MYO15AQ9UKN7 3530 aa13.65□□□□□ -0.22
RANBP3-209ENST00000587411 GFRA3O60609 400 aa13.65□□□□□ -0.22
RANBP3-209ENST00000587411 TNFSF15O95150 251 aa13.65□□□□□ -0.22
RANBP3-209ENST00000587411 ADH4P08319 380 aa13.65□□□□□ -0.22
RANBP3-209ENST00000587411 ERVK-16P61578 105 aa13.65□□□□□ -0.22
RANBP3-209ENST00000587411 RAB31Q13636 194 aa13.65□□□□□ -0.22
RANBP3-209ENST00000587411 MMDQ15546 238 aa13.65□□□□□ -0.22
RANBP3-209ENST00000587411 TRAT1Q6PIZ9 186 aa13.65□□□□□ -0.22
RANBP3-209ENST00000587411 TMPRSS7Q7RTY8 843 aa13.65□□□□□ -0.22
RANBP3-209ENST00000587411 KLHDC1Q8N7A1 406 aa13.65□□□□□ -0.22
RANBP3-209ENST00000587411 FAM216AQ8WUB2 273 aa13.65□□□□□ -0.22
RANBP3-209ENST00000587411 TRIOO75962 3097 aa13.65□□□□□ -0.22
RANBP3-209ENST00000587411 IGLC2P0DOY2 106 aa13.65□□□□□ -0.22
RANBP3-209ENST00000587411 IGLC3P0DOY3 106 aa13.65□□□□□ -0.22
RANBP3-209ENST00000587411 DUTP33316 252 aaKnown RBP13.65□□□□□ -0.22
RANBP3-209ENST00000587411 GNG4P50150 75 aa13.65□□□□□ -0.22
RANBP3-209ENST00000587411 GCNT2Q8N0V5 402 aa13.65□□□□□ -0.22
RANBP3-209ENST00000587411 OSTCQ9NRP0 149 aa13.65□□□□□ -0.22
RANBP3-209ENST00000587411 LOXL2Q9Y4K0 774 aa13.65□□□□□ -0.22
RANBP3-209ENST00000587411 FAM166BA8MTA8 275 aa13.64□□□□□ -0.23
RANBP3-209ENST00000587411 SPINT2O43291 252 aa13.64□□□□□ -0.23
RANBP3-209ENST00000587411 TCF21O43680 179 aa13.64□□□□□ -0.23
RANBP3-209ENST00000587411 FCGR3BO75015 233 aa13.64□□□□□ -0.23
RANBP3-209ENST00000587411 GPR12P47775 334 aa13.64□□□□□ -0.23
RANBP3-209ENST00000587411 DUSP3P51452 185 aaPredicted RBP13.64□□□□□ -0.23
RANBP3-209ENST00000587411 LINC00205P59089 165 aa13.64□□□□□ -0.23
RANBP3-209ENST00000587411 TEPPQ6URK8 271 aa13.64□□□□□ -0.23
RANBP3-209ENST00000587411 TMEM136Q6ZRR5 245 aa13.64□□□□□ -0.23
RANBP3-209ENST00000587411 ORAOV1Q8WV07 137 aa13.64□□□□□ -0.23
RANBP3-209ENST00000587411 SSMEM1Q8WWF3 244 aa13.64□□□□□ -0.23
RANBP3-209ENST00000587411 TXN2Q99757 166 aa13.64□□□□□ -0.23
RANBP3-209ENST00000587411 ZNF576Q9H609 170 aa13.64□□□□□ -0.23
RANBP3-209ENST00000587411 TRGV8A0A0C4DH27 118 aa13.64□□□□□ -0.23
RANBP3-209ENST00000587411 A0A1W2PS18 150 aa13.64□□□□□ -0.23
RANBP3-209ENST00000587411 FRMD6-AS1P0C7T7 363 aa13.64□□□□□ -0.23
RANBP3-209ENST00000587411 SSTR5P35346 364 aa13.64□□□□□ -0.23
RANBP3-209ENST00000587411 MAGEA5P43359 124 aa13.64□□□□□ -0.23
RANBP3-209ENST00000587411 HNRNPA3P51991 378 aaKnown RBP13.64□□□□□ -0.23
RANBP3-209ENST00000587411 STPG3Q8N7X2 389 aa13.64□□□□□ -0.23
RANBP3-209ENST00000587411 SEPSECSQ9HD40 501 aaKnown RBP13.64□□□□□ -0.23
RANBP3-209ENST00000587411 SLC25A10Q9UBX3 287 aaPredicted RBP13.64□□□□□ -0.23
RANBP3-209ENST00000587411 LAMTOR2Q9Y2Q5 125 aa13.64□□□□□ -0.23
RANBP3-209ENST00000587411 ESPL1Q14674 2120 aa13.63□□□□□ -0.23
RANBP3-209ENST00000587411 FREM1Q5H8C1 2179 aa13.63□□□□□ -0.23
RANBP3-209ENST00000587411 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.63□□□□□ -0.23
RANBP3-209ENST00000587411 IGHV3-64DA0A0J9YX35 117 aa13.63□□□□□ -0.23
RANBP3-209ENST00000587411 HYPMO75409 117 aa13.63□□□□□ -0.23
RANBP3-209ENST00000587411 ZNF324O75467 553 aaPredicted RBP13.63□□□□□ -0.23
RANBP3-209ENST00000587411 PRRX1P54821 245 aa13.63□□□□□ -0.23
RANBP3-209ENST00000587411 CENPWQ5EE01 88 aa13.63□□□□□ -0.23
RANBP3-209ENST00000587411 C19orf35Q6ZS72 473 aa13.63□□□□□ -0.23
RANBP3-209ENST00000587411 ASCL3Q9NQ33 180 aa13.63□□□□□ -0.23
RANBP3-209ENST00000587411 IGHV3-43A0A0B4J1X8 118 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms