RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 HRASP01112 189 aa16.55■□□□□ 0.24
ATG4D-204ENST00000586417 IL6RP08887 468 aaPredicted RBP16.55■□□□□ 0.24
ATG4D-204ENST00000586417 SULT1A1P50225 295 aa16.55■□□□□ 0.24
ATG4D-204ENST00000586417 DYNLT3P51808 116 aa16.55■□□□□ 0.24
ATG4D-204ENST00000586417 TAGLNQ01995 201 aaKnown RBP16.55■□□□□ 0.24
ATG4D-204ENST00000586417 TMEM267Q0VDI3 215 aaPredicted RBP16.55■□□□□ 0.24
ATG4D-204ENST00000586417 OR5C1Q8NGR4 320 aa16.55■□□□□ 0.24
ATG4D-204ENST00000586417 ZDHHC16Q969W1 377 aa16.55■□□□□ 0.24
ATG4D-204ENST00000586417 CXorf58Q96LI9 332 aa16.55■□□□□ 0.24
ATG4D-204ENST00000586417 SRRM4A7MD48 611 aaKnown RBP16.54■□□□□ 0.24
ATG4D-204ENST00000586417 APOA2P02652 100 aa16.54■□□□□ 0.24
ATG4D-204ENST00000586417 RRASP10301 218 aa16.54■□□□□ 0.24
ATG4D-204ENST00000586417 IL3RAP26951 378 aa16.54■□□□□ 0.24
ATG4D-204ENST00000586417 PRRX1P54821 245 aa16.54■□□□□ 0.24
ATG4D-204ENST00000586417 ARF6P62330 175 aa16.54■□□□□ 0.24
ATG4D-204ENST00000586417 CLINT1Q14677 625 aa16.54■□□□□ 0.24
ATG4D-204ENST00000586417 PDLIM3Q53GG5 364 aaPredicted RBP16.54■□□□□ 0.24
ATG4D-204ENST00000586417 TGIF2LXQ8IUE1 241 aa16.54■□□□□ 0.24
ATG4D-204ENST00000586417 OR4A16Q8NH70 328 aa16.54■□□□□ 0.24
ATG4D-204ENST00000586417 DTD1Q8TEA8 209 aa16.54■□□□□ 0.24
ATG4D-204ENST00000586417 PCGF1Q9BSM1 259 aa16.54■□□□□ 0.24
ATG4D-204ENST00000586417 LPAR2Q9HBW0 351 aa16.54■□□□□ 0.24
ATG4D-204ENST00000586417 BORCS7-ASMTA0A0B4J1R7 106 aa16.54■□□□□ 0.24
ATG4D-204ENST00000586417 LEUTXA8MZ59 168 aa16.54■□□□□ 0.24
ATG4D-204ENST00000586417 COX7A1P24310 79 aa16.54■□□□□ 0.24
ATG4D-204ENST00000586417 HAPLN4Q86UW8 402 aa16.54■□□□□ 0.24
ATG4D-204ENST00000586417 ZNF429Q86V71 674 aa16.54■□□□□ 0.24
ATG4D-204ENST00000586417 STX12Q86Y82 276 aa16.54■□□□□ 0.24
ATG4D-204ENST00000586417 PDZD9Q8IXQ8 264 aa16.54■□□□□ 0.24
ATG4D-204ENST00000586417 TMEM217Q8N7C4 229 aa16.54■□□□□ 0.24
ATG4D-204ENST00000586417 OR4P4Q8NGL7 312 aa16.54■□□□□ 0.24
ATG4D-204ENST00000586417 OR52E5Q8NH55 327 aa16.54■□□□□ 0.24
ATG4D-204ENST00000586417 GINS3Q9BRX5 216 aa16.54■□□□□ 0.24
ATG4D-204ENST00000586417 C15orf61A6NNL5 157 aa16.53■□□□□ 0.24
ATG4D-204ENST00000586417 BUB1B-PAK6H3BSN5 160 aa16.53■□□□□ 0.24
ATG4D-204ENST00000586417 FGF16O43320 207 aa16.53■□□□□ 0.24
ATG4D-204ENST00000586417 FAM157CP0CG43 387 aa16.53■□□□□ 0.24
ATG4D-204ENST00000586417 PAX2Q02962 417 aa16.53■□□□□ 0.24
ATG4D-204ENST00000586417 ARL16Q0P5N6 197 aa16.53■□□□□ 0.24
ATG4D-204ENST00000586417 TMEM177Q53S58 311 aa16.53■□□□□ 0.24
ATG4D-204ENST00000586417 SPINK9Q5DT21 86 aa16.53■□□□□ 0.24
ATG4D-204ENST00000586417 TMEM14EPQ6UXP3 125 aa16.53■□□□□ 0.24
ATG4D-204ENST00000586417 STPG2Q8N412 459 aa16.53■□□□□ 0.24
ATG4D-204ENST00000586417 OSR1Q8TAX0 266 aaPredicted RBP16.53■□□□□ 0.24
ATG4D-204ENST00000586417 PLA2G2EQ9NZK7 142 aa16.53■□□□□ 0.24
ATG4D-204ENST00000586417 A8MXK9 166 aa16.52■□□□□ 0.24
ATG4D-204ENST00000586417 METTL15P1P0C7V9 234 aa16.52■□□□□ 0.24
ATG4D-204ENST00000586417 SPANXN5Q5MJ07 72 aa16.52■□□□□ 0.24
ATG4D-204ENST00000586417 PDPNQ86YL7 162 aa16.52■□□□□ 0.24
ATG4D-204ENST00000586417 CIARTQ8N365 385 aaPredicted RBP16.52■□□□□ 0.24
ATG4D-204ENST00000586417 PNKDQ8N490 385 aa16.52■□□□□ 0.24
ATG4D-204ENST00000586417 OR4C12Q96R67 309 aa16.52■□□□□ 0.24
ATG4D-204ENST00000586417 MMP26Q9NRE1 261 aa16.52■□□□□ 0.24
ATG4D-204ENST00000586417 TMEM14BQ9NUH8 114 aa16.52■□□□□ 0.24
ATG4D-204ENST00000586417 MED9Q9NWA0 146 aa16.52■□□□□ 0.24
ATG4D-204ENST00000586417 TET2Q6N021 2002 aaPredicted RBP16.52■□□□□ 0.23
ATG4D-204ENST00000586417 H7C2Y5 167 aa16.51■□□□□ 0.23
ATG4D-204ENST00000586417 SPCS3P61009 180 aa16.51■□□□□ 0.23
ATG4D-204ENST00000586417 LOXL1Q08397 574 aaPredicted RBP16.51■□□□□ 0.23
ATG4D-204ENST00000586417 ZNF266Q14584 549 aa16.51■□□□□ 0.23
ATG4D-204ENST00000586417 EIF5AL1Q6IS14 154 aaKnown RBP16.51■□□□□ 0.23
ATG4D-204ENST00000586417 KIR3DL3Q8N743 410 aa16.51■□□□□ 0.23
ATG4D-204ENST00000586417 OR1S2Q8NGQ3 325 aa16.51■□□□□ 0.23
ATG4D-204ENST00000586417 CIB3Q96Q77 187 aaPredicted RBP16.51■□□□□ 0.23
ATG4D-204ENST00000586417 SIRT7Q9NRC8 400 aa16.51■□□□□ 0.23
ATG4D-204ENST00000586417 FOXA2Q9Y261 457 aaPredicted RBP16.51■□□□□ 0.23
ATG4D-204ENST00000586417 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.51■□□□□ 0.239e-7■■■□□ 18.2
ATG4D-204ENST00000586417 ACANP16112 2415 aa16.51■□□□□ 0.23
ATG4D-204ENST00000586417 CYSRT1A8MQ03 144 aa16.51■□□□□ 0.23
ATG4D-204ENST00000586417 CEBPZOSA8MTT3 80 aa16.51■□□□□ 0.23
ATG4D-204ENST00000586417 LY6LH3BQJ8 138 aa16.51■□□□□ 0.23
ATG4D-204ENST00000586417 FBXO24O75426 580 aa16.51■□□□□ 0.23
ATG4D-204ENST00000586417 IFNA17P01571 189 aa16.51■□□□□ 0.23
ATG4D-204ENST00000586417 S100A1P23297 94 aa16.51■□□□□ 0.23
ATG4D-204ENST00000586417 PRTN3P24158 256 aa16.51■□□□□ 0.23
ATG4D-204ENST00000586417 HCP5Q6MZN7 132 aa16.51■□□□□ 0.23
ATG4D-204ENST00000586417 C1orf122Q6ZSJ8 110 aa16.51■□□□□ 0.23
ATG4D-204ENST00000586417 COMMD7Q86VX2 200 aa16.51■□□□□ 0.23
ATG4D-204ENST00000586417 PUSL1Q8N0Z8 303 aaKnown RBP16.51■□□□□ 0.23
ATG4D-204ENST00000586417 OR11H6Q8NGC7 330 aa16.51■□□□□ 0.23
ATG4D-204ENST00000586417 LHX4Q969G2 390 aa16.51■□□□□ 0.23
ATG4D-204ENST00000586417 WASHC3Q9Y3C0 194 aa16.51■□□□□ 0.23
ATG4D-204ENST00000586417 UPK2O00526 184 aa16.5■□□□□ 0.23
ATG4D-204ENST00000586417 SHOXO15266 292 aa16.5■□□□□ 0.23
ATG4D-204ENST00000586417 ENSAO43768 121 aaKnown RBP16.5■□□□□ 0.23
ATG4D-204ENST00000586417 SAA1P0DJI8 122 aaPredicted RBP16.5■□□□□ 0.23
ATG4D-204ENST00000586417 SPP1P10451 314 aa16.5■□□□□ 0.23
ATG4D-204ENST00000586417 OR4C13Q8NGP0 309 aa16.5■□□□□ 0.23
ATG4D-204ENST00000586417 RNF141Q8WVD5 230 aa16.5■□□□□ 0.23
ATG4D-204ENST00000586417 FLYWCH2Q96CP2 140 aaKnown RBP16.5■□□□□ 0.23
ATG4D-204ENST00000586417 HARBI1Q96MB7 349 aa16.5■□□□□ 0.23
ATG4D-204ENST00000586417 ATP5SQ99766 215 aa16.5■□□□□ 0.23
ATG4D-204ENST00000586417 BET1LQ9NYM9 111 aa16.5■□□□□ 0.23
ATG4D-204ENST00000586417 ARG1P05089 322 aa16.49■□□□□ 0.23
ATG4D-204ENST00000586417 SEC11BP0C7V7 166 aa16.49■□□□□ 0.23
ATG4D-204ENST00000586417 VDAC2P45880 294 aaPredicted RBP16.49■□□□□ 0.23
ATG4D-204ENST00000586417 LDLRAD2Q5SZI1 272 aa16.49■□□□□ 0.23
ATG4D-204ENST00000586417 CITED4Q96RK1 184 aa16.49■□□□□ 0.23
ATG4D-204ENST00000586417 AIFM2Q9BRQ8 373 aa16.49■□□□□ 0.23
ATG4D-204ENST00000586417 UNKLQ9H9P5 680 aaKnown RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms