RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	HRAS	P01112	189 aa		10.24	□□□□□ -0.77
SREBF1-223	ENST00000584760	HSPB1	P04792	205 aa	Known RBP	10.24	□□□□□ -0.77
SREBF1-223	ENST00000584760	OR9G9	P0C7N8	305 aa		10.24	□□□□□ -0.77
SREBF1-223	ENST00000584760	ZNF182	P17025	639 aa	Predicted RBP	10.24	□□□□□ -0.77
SREBF1-223	ENST00000584760	CATR1	Q13166	79 aa		10.24	□□□□□ -0.77
SREBF1-223	ENST00000584760	POU2AF1	Q16633	256 aa		10.24	□□□□□ -0.77
SREBF1-223	ENST00000584760	MZT2A	Q6P582	158 aa		10.24	□□□□□ -0.77
SREBF1-223	ENST00000584760	BORCS5	Q969J3	196 aa		10.24	□□□□□ -0.77
SREBF1-223	ENST00000584760	SPIN2A	Q99865	258 aa		10.24	□□□□□ -0.77
SREBF1-223	ENST00000584760	SPIN2B	Q9BPZ2	258 aa		10.24	□□□□□ -0.77
SREBF1-223	ENST00000584760	COA4	Q9NYJ1	87 aa		10.24	□□□□□ -0.77
SREBF1-223	ENST00000584760	ZMAT5	Q9UDW3	170 aa	Known RBP	10.24	□□□□□ -0.77
SREBF1-223	ENST00000584760		A0A0G2JLM5	398 aa		10.23	□□□□□ -0.77
SREBF1-223	ENST00000584760	C13orf42	A0A1B0GVH6	325 aa		10.23	□□□□□ -0.77
SREBF1-223	ENST00000584760		A0A1B0GW64	132 aa		10.23	□□□□□ -0.77
SREBF1-223	ENST00000584760	TEX22	C9J3V5	150 aa		10.23	□□□□□ -0.77
SREBF1-223	ENST00000584760	MPPED1	O15442	326 aa		10.23	□□□□□ -0.77
SREBF1-223	ENST00000584760	NHLRC4	P0CG21	123 aa	Predicted RBP	10.23	□□□□□ -0.77
SREBF1-223	ENST00000584760	HLA-DMA	P28067	261 aa		10.23	□□□□□ -0.77
SREBF1-223	ENST00000584760	RCVRN	P35243	200 aa		10.23	□□□□□ -0.77
SREBF1-223	ENST00000584760	INSL3	P51460	131 aa		10.23	□□□□□ -0.77
SREBF1-223	ENST00000584760	TAS2R31	P59538	309 aa		10.23	□□□□□ -0.77
SREBF1-223	ENST00000584760	ZNF45	Q02386	682 aa		10.23	□□□□□ -0.77
SREBF1-223	ENST00000584760	SPCS2	Q15005	226 aa		10.23	□□□□□ -0.77
SREBF1-223	ENST00000584760	AADACL3	Q5VUY0	350 aa		10.23	□□□□□ -0.77
SREBF1-223	ENST00000584760	OR4A47	Q6IF82	309 aa		10.23	□□□□□ -0.77
SREBF1-223	ENST00000584760	OR51H1	Q8NH63	302 aa		10.23	□□□□□ -0.77
SREBF1-223	ENST00000584760	BET1L	Q9NYM9	111 aa		10.23	□□□□□ -0.77
SREBF1-223	ENST00000584760	SORL1	Q92673	2214 aa		10.23	□□□□□ -0.77
SREBF1-223	ENST00000584760	TRBV9	A0A0B4J1U6	114 aa		10.22	□□□□□ -0.77
SREBF1-223	ENST00000584760	FAM25A	B3EWG3	89 aa		10.22	□□□□□ -0.77
SREBF1-223	ENST00000584760	FAM25C	B3EWG5	89 aa		10.22	□□□□□ -0.77
SREBF1-223	ENST00000584760	FAM25G	B3EWG6	89 aa		10.22	□□□□□ -0.77
SREBF1-223	ENST00000584760		E7EUB6	86 aa		10.22	□□□□□ -0.77
SREBF1-223	ENST00000584760	RLN1	P04808	185 aa		10.22	□□□□□ -0.77
SREBF1-223	ENST00000584760	ZNF735	P0CB33	412 aa		10.22	□□□□□ -0.77
SREBF1-223	ENST00000584760	MAS1L	P35410	378 aa		10.22	□□□□□ -0.77
SREBF1-223	ENST00000584760	RPL27A	P46776	148 aa	Known RBP	10.22	□□□□□ -0.77
SREBF1-223	ENST00000584760	DCTN2	Q13561	401 aa	Known RBP	10.22	□□□□□ -0.77
SREBF1-223	ENST00000584760	ZNF343	Q6P1L6	599 aa		10.22	□□□□□ -0.77
SREBF1-223	ENST00000584760	SSX9	Q7RTT3	188 aa		10.22	□□□□□ -0.77
SREBF1-223	ENST00000584760	OR6F1	Q8NGZ6	308 aa		10.22	□□□□□ -0.77
SREBF1-223	ENST00000584760	USMG5	Q96IX5	58 aa		10.22	□□□□□ -0.77
SREBF1-223	ENST00000584760	PLEKHA2	Q9HB19	425 aa		10.22	□□□□□ -0.77
SREBF1-223	ENST00000584760	EXTL2	Q9UBQ6	330 aa		10.22	□□□□□ -0.77
SREBF1-223	ENST00000584760	HMX3	A6NHT5	357 aa		10.21	□□□□□ -0.77
SREBF1-223	ENST00000584760	FAM223B	A6NKX1	122 aa		10.21	□□□□□ -0.77
SREBF1-223	ENST00000584760	C3orf84	H3BNL1	204 aa		10.21	□□□□□ -0.77
SREBF1-223	ENST00000584760	PGLYRP1	O75594	196 aa	Predicted RBP	10.21	□□□□□ -0.77
SREBF1-223	ENST00000584760	S1PR2	O95136	353 aa		10.21	□□□□□ -0.77
SREBF1-223	ENST00000584760	HPRT1	P00492	218 aa		10.21	□□□□□ -0.77
SREBF1-223	ENST00000584760	PRH1	P02810	166 aa		10.21	□□□□□ -0.77
SREBF1-223	ENST00000584760	IL6R	P08887	468 aa	Predicted RBP	10.21	□□□□□ -0.77
SREBF1-223	ENST00000584760	NQO2	P16083	231 aa		10.21	□□□□□ -0.77
SREBF1-223	ENST00000584760	HLA-G	P17693	338 aa		10.21	□□□□□ -0.77
SREBF1-223	ENST00000584760	ECI1	P42126	302 aa		10.21	□□□□□ -0.77
SREBF1-223	ENST00000584760	RPL8	P62917	257 aa	Known RBP	10.21	□□□□□ -0.77
SREBF1-223	ENST00000584760	RHOG	P84095	191 aa		10.21	□□□□□ -0.77
SREBF1-223	ENST00000584760	ACSM6	Q6P461	480 aa		10.21	□□□□□ -0.77
SREBF1-223	ENST00000584760	ZNF429	Q86V71	674 aa		10.21	□□□□□ -0.77
SREBF1-223	ENST00000584760	CLVS1	Q8IUQ0	354 aa	Predicted RBP	10.21	□□□□□ -0.77
SREBF1-223	ENST00000584760	FAM223A	Q8IWN6	122 aa		10.21	□□□□□ -0.77
SREBF1-223	ENST00000584760	TTC9C	Q8N5M4	171 aa		10.21	□□□□□ -0.77
SREBF1-223	ENST00000584760	OR4A5	Q8NH83	315 aa		10.21	□□□□□ -0.77
SREBF1-223	ENST00000584760	CD300LF	Q8TDQ1	290 aa		10.21	□□□□□ -0.77
SREBF1-223	ENST00000584760	RAB2B	Q8WUD1	216 aa		10.21	□□□□□ -0.77
SREBF1-223	ENST00000584760	PRR25	Q96S07	402 aa		10.21	□□□□□ -0.77
SREBF1-223	ENST00000584760	AIFM2	Q9BRQ8	373 aa		10.21	□□□□□ -0.77
SREBF1-223	ENST00000584760	MIXL1	Q9H2W2	232 aa		10.21	□□□□□ -0.77
SREBF1-223	ENST00000584760	RANGRF	Q9HD47	186 aa	Predicted RBP	10.21	□□□□□ -0.77
SREBF1-223	ENST00000584760	AKIP1	Q9NQ31	210 aa		10.21	□□□□□ -0.77
SREBF1-223	ENST00000584760	COMMD9	Q9P000	198 aa		10.21	□□□□□ -0.77
SREBF1-223	ENST00000584760	ZNF257	Q9Y2Q1	563 aa		10.21	□□□□□ -0.77
SREBF1-223	ENST00000584760	ANKRD34B	A5PLL1	514 aa		10.2	□□□□□ -0.78
SREBF1-223	ENST00000584760	CGB1	A6NKQ9	187 aa		10.2	□□□□□ -0.78
SREBF1-223	ENST00000584760	NPIPB5	A8MRT5	1133 aa		10.2	□□□□□ -0.78
SREBF1-223	ENST00000584760	GPR31	O00270	319 aa		10.2	□□□□□ -0.78
SREBF1-223	ENST00000584760	TPPP	O94811	219 aa		10.2	□□□□□ -0.78
SREBF1-223	ENST00000584760	TRBV12-3	P01733	135 aa		10.2	□□□□□ -0.78
SREBF1-223	ENST00000584760	FGF2	P09038	288 aa		10.2	□□□□□ -0.78
SREBF1-223	ENST00000584760	MYOD1	P15172	320 aa		10.2	□□□□□ -0.78
SREBF1-223	ENST00000584760	ZP3	P21754	424 aa		10.2	□□□□□ -0.78
SREBF1-223	ENST00000584760	F2R	P25116	425 aa		10.2	□□□□□ -0.78
SREBF1-223	ENST00000584760	RNASE12	Q5GAN4	147 aa	Known RBP	10.2	□□□□□ -0.78
SREBF1-223	ENST00000584760	SLC25A42	Q86VD7	318 aa		10.2	□□□□□ -0.78
SREBF1-223	ENST00000584760	LAX1	Q8IWV1	398 aa		10.2	□□□□□ -0.78
SREBF1-223	ENST00000584760	CMTM1	Q8IZ96	169 aa		10.2	□□□□□ -0.78
SREBF1-223	ENST00000584760	OR52I2	Q8NH67	350 aa		10.2	□□□□□ -0.78
SREBF1-223	ENST00000584760	FYTTD1	Q96QD9	318 aa	Known RBP	10.2	□□□□□ -0.78
SREBF1-223	ENST00000584760	ABHD1	Q96SE0	405 aa		10.2	□□□□□ -0.78
SREBF1-223	ENST00000584760	BCL7B	Q9BQE9	202 aa		10.2	□□□□□ -0.78
SREBF1-223	ENST00000584760	HRASLS	Q9HDD0	168 aa		10.2	□□□□□ -0.78
SREBF1-223	ENST00000584760	SLC2A9	Q9NRM0	540 aa		10.2	□□□□□ -0.78
SREBF1-223	ENST00000584760	TMEM140	Q9NV12	185 aa		10.2	□□□□□ -0.78
SREBF1-223	ENST00000584760	CCDC59	Q9P031	241 aa	Known RBP	10.2	□□□□□ -0.78
SREBF1-223	ENST00000584760	ZNF256	Q9Y2P7	627 aa	Predicted RBP	10.2	□□□□□ -0.78
SREBF1-223	ENST00000584760	TRAV3	A0A0B4J244	114 aa		10.19	□□□□□ -0.78
SREBF1-223	ENST00000584760	UPK2	O00526	184 aa		10.19	□□□□□ -0.78
SREBF1-223	ENST00000584760	SAP30	O75446	220 aa		10.19	□□□□□ -0.78
SREBF1-223	ENST00000584760	CRYGC	P07315	174 aa		10.19	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms