RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 FOXA2Q9Y261 457 aaPredicted RBP11.27□□□□□ -0.6
UBBP4-202ENST00000584755 UNC79Q9P2D8 2635 aa11.27□□□□□ -0.61
UBBP4-202ENST00000584755 KANTRA0A1W2PQU2 76 aa11.26□□□□□ -0.61
UBBP4-202ENST00000584755 VAMP2P63027 116 aa11.26□□□□□ -0.61
UBBP4-202ENST00000584755 CCDC144NLQ6NUI1 221 aa11.26□□□□□ -0.61
UBBP4-202ENST00000584755 MOB3BQ86TA1 216 aa11.26□□□□□ -0.61
UBBP4-202ENST00000584755 SLC51BQ86UW2 128 aa11.26□□□□□ -0.61
UBBP4-202ENST00000584755 LINC01356Q8N9X3 169 aa11.26□□□□□ -0.61
UBBP4-202ENST00000584755 OR4A5Q8NH83 315 aa11.26□□□□□ -0.61
UBBP4-202ENST00000584755 ARPC5LQ9BPX5 153 aa11.26□□□□□ -0.61
UBBP4-202ENST00000584755 REG4Q9BYZ8 158 aa11.26□□□□□ -0.61
UBBP4-202ENST00000584755 IGHV3-72A0A0B4J1Y9 119 aa11.25□□□□□ -0.61
UBBP4-202ENST00000584755 CENPVL3A0A0U1RRI6 287 aa11.25□□□□□ -0.61
UBBP4-202ENST00000584755 TAAR5O14804 337 aa11.25□□□□□ -0.61
UBBP4-202ENST00000584755 TIMM23O14925 209 aa11.25□□□□□ -0.61
UBBP4-202ENST00000584755 TSC22D2O75157 780 aa11.25□□□□□ -0.61
UBBP4-202ENST00000584755 KBTBD11O94819 623 aa11.25□□□□□ -0.61
UBBP4-202ENST00000584755 LY86O95711 162 aa11.25□□□□□ -0.61
UBBP4-202ENST00000584755 OR2B8PP59922 312 aa11.25□□□□□ -0.61
UBBP4-202ENST00000584755 SPCS3P61009 180 aa11.25□□□□□ -0.61
UBBP4-202ENST00000584755 RPS16P62249 146 aaKnown RBP11.25□□□□□ -0.61
UBBP4-202ENST00000584755 RPL23AP62750 156 aaKnown RBP11.25□□□□□ -0.61
UBBP4-202ENST00000584755 TEX261Q6UWH6 196 aa11.25□□□□□ -0.61
UBBP4-202ENST00000584755 PDZD9Q8IXQ8 264 aa11.25□□□□□ -0.61
UBBP4-202ENST00000584755 TMEM252Q8N6L7 170 aa11.25□□□□□ -0.61
UBBP4-202ENST00000584755 VSTM2AQ8TAG5 236 aa11.25□□□□□ -0.61
UBBP4-202ENST00000584755 TMEM167AQ8TBQ9 72 aa11.25□□□□□ -0.61
UBBP4-202ENST00000584755 MALSU1Q96EH3 234 aa11.25□□□□□ -0.61
UBBP4-202ENST00000584755 RITA1Q96K30 269 aa11.25□□□□□ -0.61
UBBP4-202ENST00000584755 SLC25A31Q9H0C2 315 aa11.25□□□□□ -0.61
UBBP4-202ENST00000584755 CYTL1Q9NRR1 136 aa11.25□□□□□ -0.61
UBBP4-202ENST00000584755 PRNDQ9UKY0 176 aa11.25□□□□□ -0.61
UBBP4-202ENST00000584755 ZNF257Q9Y2Q1 563 aa11.25□□□□□ -0.61
UBBP4-202ENST00000584755 U3KQ87 197 aa11.25□□□□□ -0.61
UBBP4-202ENST00000584755 IGSF23A1L1A6 192 aa11.25□□□□□ -0.61
UBBP4-202ENST00000584755 FAM24AA6NFZ4 105 aa11.25□□□□□ -0.61
UBBP4-202ENST00000584755 RBMXL2O75526 392 aaKnown RBP11.25□□□□□ -0.61
UBBP4-202ENST00000584755 VENTXO95231 258 aa11.25□□□□□ -0.61
UBBP4-202ENST00000584755 CRYGBP07316 175 aa11.25□□□□□ -0.61
UBBP4-202ENST00000584755 LGALS4P56470 323 aa11.25□□□□□ -0.61
UBBP4-202ENST00000584755 EWSR1Q01844 656 aaKnown RBP eCLIP11.25□□□□□ -0.61
UBBP4-202ENST00000584755 BAXQ07812 192 aa11.25□□□□□ -0.61
UBBP4-202ENST00000584755 DYNAPQ8N1N2 210 aa11.25□□□□□ -0.61
UBBP4-202ENST00000584755 DTD1Q8TEA8 209 aa11.25□□□□□ -0.61
UBBP4-202ENST00000584755 CIB3Q96Q77 187 aaPredicted RBP11.25□□□□□ -0.61
UBBP4-202ENST00000584755 HILPDAQ9Y5L2 63 aa11.25□□□□□ -0.61
UBBP4-202ENST00000584755 AUP1Q9Y679 476 aa11.25□□□□□ -0.61
UBBP4-202ENST00000584755 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.24□□□□□ -0.61
UBBP4-202ENST00000584755 A0A1W2PRD5 423 aa11.24□□□□□ -0.61
UBBP4-202ENST00000584755 A0A1W2PRF3 423 aa11.24□□□□□ -0.61
UBBP4-202ENST00000584755 A0A1W2PRM7 423 aa11.24□□□□□ -0.61
UBBP4-202ENST00000584755 RNF223E7ERA6 249 aa11.24□□□□□ -0.61
UBBP4-202ENST00000584755 NPFFO15130 113 aa11.24□□□□□ -0.61
UBBP4-202ENST00000584755 CFDP00746 253 aaPredicted RBP11.24□□□□□ -0.61
UBBP4-202ENST00000584755 IAPPP10997 89 aa11.24□□□□□ -0.61
UBBP4-202ENST00000584755 SAA4P35542 130 aa11.24□□□□□ -0.61
UBBP4-202ENST00000584755 CAV2P51636 162 aa11.24□□□□□ -0.61
UBBP4-202ENST00000584755 HSPE1P61604 102 aaKnown RBP11.24□□□□□ -0.61
UBBP4-202ENST00000584755 UBA52P62987 128 aaKnown RBP11.24□□□□□ -0.61
UBBP4-202ENST00000584755 EBI3Q14213 229 aa11.24□□□□□ -0.61
UBBP4-202ENST00000584755 MRGPRG-AS1Q2M3A8 158 aa11.24□□□□□ -0.61
UBBP4-202ENST00000584755 VMA21Q3ZAQ7 101 aa11.24□□□□□ -0.61
UBBP4-202ENST00000584755 ZNF767PQ75MW2 155 aa11.24□□□□□ -0.61
UBBP4-202ENST00000584755 TEX45Q8NA69 505 aa11.24□□□□□ -0.61
UBBP4-202ENST00000584755 ZNF680Q8NEM1 530 aa11.24□□□□□ -0.61
UBBP4-202ENST00000584755 STOML3Q8TAV4 291 aa11.24□□□□□ -0.61
UBBP4-202ENST00000584755 ZDHHC16Q969W1 377 aa11.24□□□□□ -0.61
UBBP4-202ENST00000584755 BSCL2Q96G97 398 aaPredicted RBP11.24□□□□□ -0.61
UBBP4-202ENST00000584755 TSNAXQ99598 290 aaKnown RBP11.24□□□□□ -0.61
UBBP4-202ENST00000584755 HIF1ANQ9NWT6 349 aa11.24□□□□□ -0.61
UBBP4-202ENST00000584755 FKBP11Q9NYL4 201 aa11.24□□□□□ -0.61
UBBP4-202ENST00000584755 PSENENQ9NZ42 101 aa11.24□□□□□ -0.61
UBBP4-202ENST00000584755 FBXL17Q9UF56 701 aa11.24□□□□□ -0.61
UBBP4-202ENST00000584755 TCF19Q9Y242 345 aa11.24□□□□□ -0.61
UBBP4-202ENST00000584755 IGHV1-69DA0A0B4J2H0 117 aa11.23□□□□□ -0.61
UBBP4-202ENST00000584755 SPDEFO95238 335 aa11.23□□□□□ -0.61
UBBP4-202ENST00000584755 IFNA17P01571 189 aa11.23□□□□□ -0.61
UBBP4-202ENST00000584755 IGHV1-69P01742 117 aa11.23□□□□□ -0.61
UBBP4-202ENST00000584755 VDAC2P45880 294 aaPredicted RBP11.23□□□□□ -0.61
UBBP4-202ENST00000584755 NHLH2Q02577 135 aa11.23□□□□□ -0.61
UBBP4-202ENST00000584755 SSX2Q16385 188 aa11.23□□□□□ -0.61
UBBP4-202ENST00000584755 TMEM14EPQ6UXP3 125 aa11.23□□□□□ -0.61
UBBP4-202ENST00000584755 STPG2Q8N412 459 aa11.23□□□□□ -0.61
UBBP4-202ENST00000584755 PIP4P2Q8N4L2 257 aa11.23□□□□□ -0.61
UBBP4-202ENST00000584755 OR8H1Q8NGG4 311 aa11.23□□□□□ -0.61
UBBP4-202ENST00000584755 OR5B3Q8NH48 314 aa11.23□□□□□ -0.61
UBBP4-202ENST00000584755 C17orf50Q8WW18 174 aa11.23□□□□□ -0.61
UBBP4-202ENST00000584755 Q96MF0 132 aa11.23□□□□□ -0.61
UBBP4-202ENST00000584755 ZC4H2Q9NQZ6 224 aa11.23□□□□□ -0.61
UBBP4-202ENST00000584755 OR51B2Q9Y5P1 312 aa11.23□□□□□ -0.61
UBBP4-202ENST00000584755 PDZD2O15018 2839 aa11.23□□□□□ -0.61
UBBP4-202ENST00000584755 FASNP49327 2511 aaKnown RBP11.23□□□□□ -0.61
UBBP4-202ENST00000584755 MAP1AP78559 2803 aaPredicted RBP11.22□□□□□ -0.61
UBBP4-202ENST00000584755 TET2Q6N021 2002 aaPredicted RBP11.22□□□□□ -0.61
UBBP4-202ENST00000584755 CEBPZOSA8MTT3 80 aa11.22□□□□□ -0.61
UBBP4-202ENST00000584755 J3QLI3 93 aa11.22□□□□□ -0.61
UBBP4-202ENST00000584755 SLC25A17O43808 307 aa11.22□□□□□ -0.61
UBBP4-202ENST00000584755 SULT1A1P50225 295 aa11.22□□□□□ -0.61
UBBP4-202ENST00000584755 RPL8P62917 257 aaKnown RBP11.22□□□□□ -0.61
UBBP4-202ENST00000584755 PSG5Q15238 335 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms