RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 Q6AWC8 147 aa11.12□□□□□ -0.63
RNF43-208ENST00000584437 OPN3Q9H1Y3 402 aaPredicted RBP11.12□□□□□ -0.63
RNF43-208ENST00000584437 SPCS1Q9Y6A9 102 aa11.12□□□□□ -0.63
RNF43-208ENST00000584437 MARF1Q9Y4F3 1742 aaKnown RBP11.12□□□□□ -0.63
RNF43-208ENST00000584437 ZNF324BQ6AW86 544 aaPredicted RBP11.12□□□□□ -0.63
RNF43-208ENST00000584437 OR9G1Q8NH87 305 aa11.12□□□□□ -0.63
RNF43-208ENST00000584437 PRELID3AQ96N28 172 aa11.12□□□□□ -0.63
RNF43-208ENST00000584437 PPP1R17O96001 155 aa11.11□□□□□ -0.63
RNF43-208ENST00000584437 BTCP35070 178 aa11.11□□□□□ -0.63
RNF43-208ENST00000584437 PCSK4Q6UW60 755 aa11.11□□□□□ -0.63
RNF43-208ENST00000584437 MAFAQ8NHW3 353 aaPredicted RBP11.11□□□□□ -0.63
RNF43-208ENST00000584437 F8VVB4 439 aa11.11□□□□□ -0.63
RNF43-208ENST00000584437 F8VWA3 439 aa11.11□□□□□ -0.63
RNF43-208ENST00000584437 FGF16O43320 207 aa11.11□□□□□ -0.63
RNF43-208ENST00000584437 TSPAN13O95857 204 aa11.11□□□□□ -0.63
RNF43-208ENST00000584437 C10orf126Q8N4M7 172 aa11.11□□□□□ -0.63
RNF43-208ENST00000584437 DNAJC13O75165 2243 aa11.11□□□□□ -0.63
RNF43-208ENST00000584437 OR5P3Q8WZ94 311 aa11.11□□□□□ -0.63
RNF43-208ENST00000584437 MOB4Q9Y3A3 225 aa11.11□□□□□ -0.63
RNF43-208ENST00000584437 ZNF646O15015 1829 aaPredicted RBP11.11□□□□□ -0.63
RNF43-208ENST00000584437 TRAV8-6A0A0B4J262 113 aa11.11□□□□□ -0.63
RNF43-208ENST00000584437 A0A1B0GUT8 65 aa11.11□□□□□ -0.63
RNF43-208ENST00000584437 SLC17A3O00476 420 aa11.11□□□□□ -0.63
RNF43-208ENST00000584437 RAMP1O60894 148 aa11.11□□□□□ -0.63
RNF43-208ENST00000584437 DNAL4O96015 105 aa11.11□□□□□ -0.63
RNF43-208ENST00000584437 THY1P04216 161 aa11.11□□□□□ -0.63
RNF43-208ENST00000584437 C5orf30Q96GV9 206 aa11.11□□□□□ -0.63
RNF43-208ENST00000584437 TMEM160Q9NX00 188 aa11.11□□□□□ -0.63
RNF43-208ENST00000584437 HILPDAQ9Y5L2 63 aa11.11□□□□□ -0.63
RNF43-208ENST00000584437 IZUMO1RA6ND01 250 aa11.1□□□□□ -0.63
RNF43-208ENST00000584437 UNQ5815/PRO19632Q6UWF5 114 aa11.1□□□□□ -0.63
RNF43-208ENST00000584437 LINC00305Q7Z4B0 112 aa11.1□□□□□ -0.63
RNF43-208ENST00000584437 IMMP2LQ96T52 175 aa11.1□□□□□ -0.63
RNF43-208ENST00000584437 FSCN3Q9NQT6 498 aa11.1□□□□□ -0.63
RNF43-208ENST00000584437 ZNFX1Q9P2E3 1918 aaKnown RBP11.1□□□□□ -0.63
RNF43-208ENST00000584437 APOHP02749 345 aaPredicted RBP11.1□□□□□ -0.63
RNF43-208ENST00000584437 RPL23P62829 140 aaKnown RBP11.1□□□□□ -0.63
RNF43-208ENST00000584437 KLF14Q8TD94 323 aaPredicted RBP11.1□□□□□ -0.63
RNF43-208ENST00000584437 ZNF71Q9NQZ8 489 aaPredicted RBP11.1□□□□□ -0.63
RNF43-208ENST00000584437 hCG_38984A0A1B0GV85 526 aa11.1□□□□□ -0.63
RNF43-208ENST00000584437 PEX7O00628 323 aa11.1□□□□□ -0.63
RNF43-208ENST00000584437 ZIC3O60481 467 aa11.1□□□□□ -0.63
RNF43-208ENST00000584437 ZXDCQ2QGD7 858 aaPredicted RBP11.1□□□□□ -0.63
RNF43-208ENST00000584437 KLK15Q9H2R5 256 aa11.1□□□□□ -0.63
RNF43-208ENST00000584437 CKAP5Q14008 2032 aa11.1□□□□□ -0.63
RNF43-208ENST00000584437 KIAA1217Q5T5P2 1943 aa11.1□□□□□ -0.63
RNF43-208ENST00000584437 NBEAP1P0C6P0 100 aa11.1□□□□□ -0.63
RNF43-208ENST00000584437 SLC22A18ASQ8N1D0 253 aa11.1□□□□□ -0.63
RNF43-208ENST00000584437 DDB2Q92466 427 aa11.1□□□□□ -0.63
RNF43-208ENST00000584437 IFI27L2Q9H2X8 130 aa11.1□□□□□ -0.63
RNF43-208ENST00000584437 GEMIN7Q9H840 131 aaKnown RBP11.1□□□□□ -0.63
RNF43-208ENST00000584437 KNTC1P50748 2209 aa11.1□□□□□ -0.63
RNF43-208ENST00000584437 GREM1O60565 184 aa11.09□□□□□ -0.63
RNF43-208ENST00000584437 TSPOP30536 169 aa11.09□□□□□ -0.63
RNF43-208ENST00000584437 JKAMPQ9P055 326 aa11.09□□□□□ -0.63
RNF43-208ENST00000584437 SCO2A0A1W2PP80 73 aa11.09□□□□□ -0.63
RNF43-208ENST00000584437 CGAP01215 116 aa11.09□□□□□ -0.63
RNF43-208ENST00000584437 ADRA2AP08913 450 aa11.09□□□□□ -0.63
RNF43-208ENST00000584437 KLRB1Q12918 225 aa11.09□□□□□ -0.63
RNF43-208ENST00000584437 MEIG1Q5JSS6 88 aa11.09□□□□□ -0.63
RNF43-208ENST00000584437 ZNF525Q8N782 197 aa11.09□□□□□ -0.63
RNF43-208ENST00000584437 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.09□□□□□ -0.63
RNF43-208ENST00000584437 SGK494Q96LW2 274 aa11.09□□□□□ -0.63
RNF43-208ENST00000584437 LINC00470Q9BZP3 86 aa11.09□□□□□ -0.63
RNF43-208ENST00000584437 AICDAQ9GZX7 198 aa11.09□□□□□ -0.63
RNF43-208ENST00000584437 RPP21Q9H633 154 aaKnown RBP11.09□□□□□ -0.63
RNF43-208ENST00000584437 UBTD1Q9HAC8 227 aa11.09□□□□□ -0.63
RNF43-208ENST00000584437 NRN1Q9NPD7 142 aa11.09□□□□□ -0.63
RNF43-208ENST00000584437 CRYBA2P53672 197 aa11.09□□□□□ -0.63
RNF43-208ENST00000584437 FMC1Q96HJ9 113 aa11.09□□□□□ -0.63
RNF43-208ENST00000584437 RNF126Q9BV68 326 aa11.09□□□□□ -0.63
RNF43-208ENST00000584437 GPX1P07203 203 aa11.09□□□□□ -0.63
RNF43-208ENST00000584437 ICAM4Q14773 271 aa11.09□□□□□ -0.63
RNF43-208ENST00000584437 CRISPLD2Q9H0B8 497 aa11.09□□□□□ -0.63
RNF43-208ENST00000584437 TMEM106BQ9NUM4 274 aa11.09□□□□□ -0.63
RNF43-208ENST00000584437 FBLN5Q9UBX5 448 aa11.09□□□□□ -0.63
RNF43-208ENST00000584437 OSR1Q8TAX0 266 aaPredicted RBP11.09□□□□□ -0.63
RNF43-208ENST00000584437 EAF1Q96JC9 268 aaPredicted RBP11.09□□□□□ -0.63
RNF43-208ENST00000584437 CGB1A6NKQ9 187 aa11.08□□□□□ -0.64
RNF43-208ENST00000584437 CELA2AP08217 269 aa11.08□□□□□ -0.64
RNF43-208ENST00000584437 SAMD13Q5VXD3 122 aa11.08□□□□□ -0.64
RNF43-208ENST00000584437 QSER1Q2KHR3 1735 aa11.08□□□□□ -0.64
RNF43-208ENST00000584437 SERF1AO75920 110 aa11.08□□□□□ -0.64
RNF43-208ENST00000584437 IGFBP3P17936 291 aaPredicted RBP11.08□□□□□ -0.64
RNF43-208ENST00000584437 ADAMTS7Q9UKP4 1686 aa11.08□□□□□ -0.64
RNF43-208ENST00000584437 IGKV3-11P04433 115 aa11.08□□□□□ -0.64
RNF43-208ENST00000584437 C1QL2Q7Z5L3 287 aa11.08□□□□□ -0.64
RNF43-208ENST00000584437 VKORC1L1Q8N0U8 176 aa11.08□□□□□ -0.64
RNF43-208ENST00000584437 NHSL1Q5SYE7 1610 aa11.08□□□□□ -0.64
RNF43-208ENST00000584437 NPIPB11E5RHQ5 1161 aa11.08□□□□□ -0.64
RNF43-208ENST00000584437 MPZP25189 248 aa11.08□□□□□ -0.64
RNF43-208ENST00000584437 ATP5G3P48201 142 aa11.08□□□□□ -0.64
RNF43-208ENST00000584437 TFF3Q07654 80 aa11.08□□□□□ -0.64
RNF43-208ENST00000584437 DERL1Q9BUN8 251 aa11.08□□□□□ -0.64
RNF43-208ENST00000584437 SEC16AO15027 2179 aa11.07□□□□□ -0.64
RNF43-208ENST00000584437 HIST1H2BKO60814 126 aa11.07□□□□□ -0.64
RNF43-208ENST00000584437 HIST1H2BJP06899 126 aa11.07□□□□□ -0.64
RNF43-208ENST00000584437 HIST1H2BOP23527 126 aa11.07□□□□□ -0.64
RNF43-208ENST00000584437 HIST1H2BBP33778 126 aa11.07□□□□□ -0.64
RNF43-208ENST00000584437 HIST1H2BDP58876 126 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms