RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 RBP2P50120 134 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 NDUFA6P56556 154 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 PIGPP57054 158 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 KRTAP10-1P60331 282 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 PKIAP61925 76 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 CCL20P78556 96 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 EWSR1Q01844 656 aaKnown RBP eCLIP3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 TLE4Q04727 773 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 BAXQ07812 192 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 FOXF1Q12946 379 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 KIAA0141Q14154 515 aaPredicted RBP3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 ENDOGQ14249 297 aaKnown RBP3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 GNMTQ14749 295 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 RSU1Q15404 277 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 PLPPR5Q32ZL2 321 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 C14orf28Q4W4Y0 310 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 COA6Q5JTJ3 125 aaKnown RBP3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 ATP1A1-AS1Q5TC04 95 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 FAM27BQ5VT28 67 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 TMEM42Q69YG0 159 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 FBXW12Q6X9E4 464 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 Q71RC1 249 aaPredicted RBP3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 C6orf201Q7Z4U5 140 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 ABHD12BQ7Z5M8 362 aaPredicted RBP3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 ZNF429Q86V71 674 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 TMEM123Q8N131 208 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 TMEM252Q8N6L7 170 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 ZNF283Q8N7M2 679 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 CCDC71LQ8N9Z2 235 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 SUMF2Q8NBJ7 301 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 STXBP6Q8NFX7 210 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 OR2M3Q8NG83 312 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 M1APQ8TC57 530 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 RNASEH2CQ8TDP1 164 aaKnown RBP3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 RTN4IP1Q8WWV3 396 aaPredicted RBP3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 MBD3L1Q8WWY6 194 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 IL22RA2Q969J5 263 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 ISOC2Q96AB3 205 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 SGK3Q96BR1 496 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 COQ2Q96H96 371 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 C14orf144Q96I85 54 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 CYYR1Q96J86 154 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 SPACA5Q96QH8 159 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 P2RX4Q99571 388 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 SPIN2AQ99865 258 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 RARRES2Q99969 163 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 SPIN2BQ9BPZ2 258 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 CHCHD5Q9BSY4 110 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 FAAP24Q9BTP7 215 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 EMC6Q9BV81 110 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 PARD6GQ9BYG4 376 aaPredicted RBP3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 ZNF160Q9HCG1 818 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 PLEKHJ1Q9NW61 149 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 RNF115Q9Y4L5 304 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 LSM5Q9Y4Y9 91 aaKnown RBP3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 MTCH2Q9Y6C9 303 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 SELENOKQ9Y6D0 94 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 CACNA1AO00555 2505 aa3.05□□□□□ -1.92
SMCHD1-208ENST00000583344 IGHV1OR21-1A0A087WYE8 117 aa3.04□□□□□ -1.92
SMCHD1-208ENST00000583344 C3orf85A0A1B0GTC6 90 aa3.04□□□□□ -1.92
SMCHD1-208ENST00000583344 A0A1B0GX78 115 aa3.04□□□□□ -1.92
SMCHD1-208ENST00000583344 FAM24AA6NFZ4 105 aa3.04□□□□□ -1.92
SMCHD1-208ENST00000583344 ARGFXA6NJG6 315 aa3.04□□□□□ -1.92
SMCHD1-208ENST00000583344 SRRM4A7MD48 611 aaKnown RBP3.04□□□□□ -1.92
SMCHD1-208ENST00000583344 ZNF850A8MQ14 1090 aa3.04□□□□□ -1.92
SMCHD1-208ENST00000583344 ZNF727A8MUV8 499 aa3.04□□□□□ -1.92
SMCHD1-208ENST00000583344 LMO7DNF2Z398 122 aa3.04□□□□□ -1.92
SMCHD1-208ENST00000583344 CLDN34H7C241 214 aa3.04□□□□□ -1.92
SMCHD1-208ENST00000583344 TOX3O15405 576 aaPredicted RBP3.04□□□□□ -1.92
SMCHD1-208ENST00000583344 HIST1H2BKO60814 126 aa3.04□□□□□ -1.92
SMCHD1-208ENST00000583344 PITX3O75364 302 aa3.04□□□□□ -1.92
SMCHD1-208ENST00000583344 YIF1AO95070 293 aa3.04□□□□□ -1.92
SMCHD1-208ENST00000583344 PRH1P02810 166 aa3.04□□□□□ -1.92
SMCHD1-208ENST00000583344 HIST1H2BJP06899 126 aa3.04□□□□□ -1.92
SMCHD1-208ENST00000583344 CXCL1P09341 107 aa3.04□□□□□ -1.92
SMCHD1-208ENST00000583344 CTXN2P0C2S0 81 aa3.04□□□□□ -1.92
SMCHD1-208ENST00000583344 OR5AC1P0C628 307 aa3.04□□□□□ -1.92
SMCHD1-208ENST00000583344 OR13C7P0DN81 318 aa3.04□□□□□ -1.92
SMCHD1-208ENST00000583344 MSR1P21757 451 aa3.04□□□□□ -1.92
SMCHD1-208ENST00000583344 CRYGSP22914 178 aa3.04□□□□□ -1.92
SMCHD1-208ENST00000583344 HIST1H2BOP23527 126 aa3.04□□□□□ -1.92
SMCHD1-208ENST00000583344 HIST1H2BBP33778 126 aa3.04□□□□□ -1.92
SMCHD1-208ENST00000583344 PPP1CCP36873 323 aaKnown RBP3.04□□□□□ -1.92
SMCHD1-208ENST00000583344 FHITP49789 147 aa3.04□□□□□ -1.92
SMCHD1-208ENST00000583344 GFERP55789 205 aa3.04□□□□□ -1.92
SMCHD1-208ENST00000583344 OR1D5P58170 312 aa3.04□□□□□ -1.92
SMCHD1-208ENST00000583344 HIST1H2BDP58876 126 aa3.04□□□□□ -1.92
SMCHD1-208ENST00000583344 TAS2R30P59541 319 aa3.04□□□□□ -1.92
SMCHD1-208ENST00000583344 OR2B8PP59922 312 aa3.04□□□□□ -1.92
SMCHD1-208ENST00000583344 SEC61GP60059 68 aa3.04□□□□□ -1.92
SMCHD1-208ENST00000583344 UBE2KP61086 200 aa3.04□□□□□ -1.92
SMCHD1-208ENST00000583344 HIST1H2BCP62807 126 aa3.04□□□□□ -1.92
SMCHD1-208ENST00000583344 HLA-DRB3P79483 266 aa3.04□□□□□ -1.92
SMCHD1-208ENST00000583344 DEFA6Q01524 100 aa3.04□□□□□ -1.92
SMCHD1-208ENST00000583344 ZNF616Q08AN1 781 aa3.04□□□□□ -1.92
SMCHD1-208ENST00000583344 JOSD1Q15040 202 aaPredicted RBP3.04□□□□□ -1.92
SMCHD1-208ENST00000583344 OR8G1Q15617 311 aa3.04□□□□□ -1.92
SMCHD1-208ENST00000583344 TAF9Q16594 264 aa3.04□□□□□ -1.92
SMCHD1-208ENST00000583344 HIST2H2BEQ16778 126 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms