RNA–Protein interactions for RNA: ENST00000583277.1

SENP3-208, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 1,578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-208ENST00000583277 KLF17Q5JT82 389 aaPredicted RBP11.77□□□□□ -0.53
SENP3-208ENST00000583277 BRD3OSQ6XYD6 125 aa11.77□□□□□ -0.53
SENP3-208ENST00000583277 ZNF429Q86V71 674 aa11.77□□□□□ -0.53
SENP3-208ENST00000583277 PUSL1Q8N0Z8 303 aaKnown RBP11.77□□□□□ -0.53
SENP3-208ENST00000583277 OR11H4Q8NGC9 324 aa11.77□□□□□ -0.53
SENP3-208ENST00000583277 OR2T10Q8NGZ9 312 aa11.77□□□□□ -0.53
SENP3-208ENST00000583277 NANPQ8TBE9 248 aa11.77□□□□□ -0.53
SENP3-208ENST00000583277 ITGB1BP2Q9UKP3 347 aa11.77□□□□□ -0.53
SENP3-208ENST00000583277 PRNDQ9UKY0 176 aa11.77□□□□□ -0.53
SENP3-208ENST00000583277 FAM96BQ9Y3D0 163 aa11.77□□□□□ -0.53
SENP3-208ENST00000583277 LSM5Q9Y4Y9 91 aaKnown RBP11.77□□□□□ -0.53
SENP3-208ENST00000583277 TNCP24821 2201 aa11.77□□□□□ -0.53
SENP3-208ENST00000583277 C15orf61A6NNL5 157 aa11.76□□□□□ -0.53
SENP3-208ENST00000583277 UPK2O00526 184 aa11.76□□□□□ -0.53
SENP3-208ENST00000583277 IGLV2-23P01705 113 aa11.76□□□□□ -0.53
SENP3-208ENST00000583277 FBP1P09467 338 aa11.76□□□□□ -0.53
SENP3-208ENST00000583277 FAM106CPP0CH98 169 aa11.76□□□□□ -0.53
SENP3-208ENST00000583277 LYL1P12980 280 aa11.76□□□□□ -0.53
SENP3-208ENST00000583277 DYNLT3P51808 116 aa11.76□□□□□ -0.53
SENP3-208ENST00000583277 RELBQ01201 579 aa11.76□□□□□ -0.53
SENP3-208ENST00000583277 TNFRSF9Q07011 255 aa11.76□□□□□ -0.53
SENP3-208ENST00000583277 CXorf66Q5JRM2 361 aaPredicted RBP11.76□□□□□ -0.53
SENP3-208ENST00000583277 TMEM65Q6PI78 240 aa11.76□□□□□ -0.53
SENP3-208ENST00000583277 THNSL2Q86YJ6 484 aa11.76□□□□□ -0.53
SENP3-208ENST00000583277 TEX45Q8NA69 505 aa11.76□□□□□ -0.53
SENP3-208ENST00000583277 FKBP11Q9NYL4 201 aa11.76□□□□□ -0.53
SENP3-208ENST00000583277 HSPB7Q9UBY9 170 aa11.76□□□□□ -0.53
SENP3-208ENST00000583277 FOXA2Q9Y261 457 aaPredicted RBP11.76□□□□□ -0.53
SENP3-208ENST00000583277 RCL1Q9Y2P8 373 aaKnown RBP11.76□□□□□ -0.53
SENP3-208ENST00000583277 ZNF469Q96JG9 3925 aaPredicted RBP11.76□□□□□ -0.53
SENP3-208ENST00000583277 A0A0U1RQK1 487 aa11.75□□□□□ -0.53
SENP3-208ENST00000583277 E5RGE8 158 aa11.75□□□□□ -0.53
SENP3-208ENST00000583277 SSSCA1O60232 199 aa11.75□□□□□ -0.53
SENP3-208ENST00000583277 FSHBP01225 129 aa11.75□□□□□ -0.53
SENP3-208ENST00000583277 SNRNP70P08621 437 aaKnown RBP11.75□□□□□ -0.53
SENP3-208ENST00000583277 IL6RP08887 468 aaPredicted RBP11.75□□□□□ -0.53
SENP3-208ENST00000583277 OR2B8PP59922 312 aa11.75□□□□□ -0.53
SENP3-208ENST00000583277 EBI3Q14213 229 aa11.75□□□□□ -0.53
SENP3-208ENST00000583277 HES1Q14469 280 aa11.75□□□□□ -0.53
SENP3-208ENST00000583277 ZNF546Q86UE3 836 aa11.75□□□□□ -0.53
SENP3-208ENST00000583277 OR52E5Q8NH55 327 aa11.75□□□□□ -0.53
SENP3-208ENST00000583277 TMEM167AQ8TBQ9 72 aa11.75□□□□□ -0.53
SENP3-208ENST00000583277 DCUN1D4Q92564 292 aa11.75□□□□□ -0.53
SENP3-208ENST00000583277 MEGF9Q9H1U4 602 aa11.75□□□□□ -0.53
SENP3-208ENST00000583277 TMEM14BQ9NUH8 114 aa11.75□□□□□ -0.53
SENP3-208ENST00000583277 NUP50Q9UKX7 468 aa11.75□□□□□ -0.53
SENP3-208ENST00000583277 NSG2Q9Y328 171 aa11.75□□□□□ -0.53
SENP3-208ENST00000583277 OTOGQ6ZRI0 2925 aa11.75□□□□□ -0.53
SENP3-208ENST00000583277 SVEP1Q4LDE5 3571 aa11.75□□□□□ -0.53
SENP3-208ENST00000583277 NAV3Q8IVL0 2385 aa11.75□□□□□ -0.53
SENP3-208ENST00000583277 H0YIZ8 118 aa11.75□□□□□ -0.53
SENP3-208ENST00000583277 SLC25A17O43808 307 aa11.75□□□□□ -0.53
SENP3-208ENST00000583277 CD5LO43866 347 aa11.75□□□□□ -0.53
SENP3-208ENST00000583277 LY86O95711 162 aa11.75□□□□□ -0.53
SENP3-208ENST00000583277 NUP62P37198 522 aaPredicted RBP11.75□□□□□ -0.53
SENP3-208ENST00000583277 NKX2-5P52952 324 aaPredicted RBP11.75□□□□□ -0.53
SENP3-208ENST00000583277 SPCS3P61009 180 aa11.75□□□□□ -0.53
SENP3-208ENST00000583277 POLR2GP62487 172 aaKnown RBP eCLIP11.75□□□□□ -0.53
SENP3-208ENST00000583277 PDLIM3Q53GG5 364 aaPredicted RBP11.75□□□□□ -0.53
SENP3-208ENST00000583277 INO80EQ8NBZ0 244 aaPredicted RBP11.75□□□□□ -0.53
SENP3-208ENST00000583277 GRPEL2Q8TAA5 225 aa11.75□□□□□ -0.53
SENP3-208ENST00000583277 EAF1Q96JC9 268 aaPredicted RBP11.75□□□□□ -0.53
SENP3-208ENST00000583277 RAB40CQ96S21 281 aa11.75□□□□□ -0.53
SENP3-208ENST00000583277 RNF126Q9BV68 326 aa11.75□□□□□ -0.53
SENP3-208ENST00000583277 QTRT1Q9BXR0 403 aaKnown RBP11.75□□□□□ -0.53
SENP3-208ENST00000583277 OR5AC2Q9NZP5 309 aa11.75□□□□□ -0.53
SENP3-208ENST00000583277 KIAA1456Q9P272 454 aa11.75□□□□□ -0.53
SENP3-208ENST00000583277 ZNF257Q9Y2Q1 563 aa11.75□□□□□ -0.53
SENP3-208ENST00000583277 TET2Q6N021 2002 aaPredicted RBP11.74□□□□□ -0.53
SENP3-208ENST00000583277 ACANP16112 2415 aa11.74□□□□□ -0.53
SENP3-208ENST00000583277 L7N2F9 121 aa11.74□□□□□ -0.53
SENP3-208ENST00000583277 NBR2O15453 112 aa11.74□□□□□ -0.53
SENP3-208ENST00000583277 ARPC5O15511 151 aa11.74□□□□□ -0.53
SENP3-208ENST00000583277 SYNGR2O43760 224 aa11.74□□□□□ -0.53
SENP3-208ENST00000583277 NXPH3O95157 252 aa11.74□□□□□ -0.53
SENP3-208ENST00000583277 IFNA17P01571 189 aa11.74□□□□□ -0.53
SENP3-208ENST00000583277 TMEM11P17152 192 aa11.74□□□□□ -0.53
SENP3-208ENST00000583277 PAX6P26367 422 aa11.74□□□□□ -0.53
SENP3-208ENST00000583277 RPL8P62917 257 aaKnown RBP11.74□□□□□ -0.53
SENP3-208ENST00000583277 VAMP2P63027 116 aa11.74□□□□□ -0.53
SENP3-208ENST00000583277 PSG5Q15238 335 aa11.74□□□□□ -0.53
SENP3-208ENST00000583277 MMDQ15546 238 aa11.74□□□□□ -0.53
SENP3-208ENST00000583277 AANATQ16613 207 aa11.74□□□□□ -0.53
SENP3-208ENST00000583277 C9orf139Q6ZV77 190 aa11.74□□□□□ -0.53
SENP3-208ENST00000583277 Q8N6K4 173 aa11.74□□□□□ -0.53
SENP3-208ENST00000583277 NPBQ8NG41 125 aa11.74□□□□□ -0.53
SENP3-208ENST00000583277 OR8H1Q8NGG4 311 aa11.74□□□□□ -0.53
SENP3-208ENST00000583277 OR5B3Q8NH48 314 aa11.74□□□□□ -0.53
SENP3-208ENST00000583277 RITA1Q96K30 269 aa11.74□□□□□ -0.53
SENP3-208ENST00000583277 MAGT1Q9H0U3 335 aa11.74□□□□□ -0.53
SENP3-208ENST00000583277 TNFSF18Q9UNG2 199 aa11.74□□□□□ -0.53
SENP3-208ENST00000583277 TRAV3A0A0B4J244 114 aa11.73□□□□□ -0.53
SENP3-208ENST00000583277 RRHO14718 337 aa11.73□□□□□ -0.53
SENP3-208ENST00000583277 GPR137BO60478 399 aa11.73□□□□□ -0.53
SENP3-208ENST00000583277 NDUFA3O95167 84 aa11.73□□□□□ -0.53
SENP3-208ENST00000583277 ZNF345Q14585 488 aa11.73□□□□□ -0.53
SENP3-208ENST00000583277 LRRC75BQ2VPJ9 315 aa11.73□□□□□ -0.53
SENP3-208ENST00000583277 MMD2Q8IY49 270 aa11.73□□□□□ -0.53
SENP3-208ENST00000583277 RBMXL1Q96E39 390 aaKnown RBP11.73□□□□□ -0.53
SENP3-208ENST00000583277 CIB3Q96Q77 187 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms