RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 H7C2Y5 167 aa10.34□□□□□ -0.75
SS18-222ENST00000582792 CA2P00918 260 aa10.34□□□□□ -0.75
SS18-222ENST00000582792 DYRK1AQ13627 763 aa10.34□□□□□ -0.75
SS18-222ENST00000582792 KLF5Q13887 457 aaPredicted RBP10.34□□□□□ -0.75
SS18-222ENST00000582792 PSG5Q15238 335 aa10.34□□□□□ -0.75
SS18-222ENST00000582792 GLDNQ6ZMI3 551 aaPredicted RBP10.34□□□□□ -0.75
SS18-222ENST00000582792 IL34Q6ZMJ4 242 aa10.34□□□□□ -0.75
SS18-222ENST00000582792 LYSMD2Q8IV50 215 aa10.34□□□□□ -0.75
SS18-222ENST00000582792 TMEM229BQ8NBD8 167 aa10.34□□□□□ -0.75
SS18-222ENST00000582792 OR5AN1Q8NGI8 311 aa10.34□□□□□ -0.75
SS18-222ENST00000582792 OR9G4Q8NGQ1 327 aa10.34□□□□□ -0.75
SS18-222ENST00000582792 OR5H2Q8NGV7 314 aa10.34□□□□□ -0.75
SS18-222ENST00000582792 IL17DQ8TAD2 202 aa10.34□□□□□ -0.75
SS18-222ENST00000582792 THAP7Q9BT49 309 aaPredicted RBP10.34□□□□□ -0.75
SS18-222ENST00000582792 TUBA4BQ9H853 241 aa10.34□□□□□ -0.75
SS18-222ENST00000582792 METTL1Q9UBP6 276 aaKnown RBP10.34□□□□□ -0.75
SS18-222ENST00000582792 ALMS1Q8TCU4 4167 aa10.33□□□□□ -0.76
SS18-222ENST00000582792 A0A0G2JLM5 398 aa10.33□□□□□ -0.76
SS18-222ENST00000582792 C13orf42A0A1B0GVH6 325 aa10.33□□□□□ -0.76
SS18-222ENST00000582792 H3BUA1 57 aa10.33□□□□□ -0.76
SS18-222ENST00000582792 TAGLNQ01995 201 aaKnown RBP10.33□□□□□ -0.76
SS18-222ENST00000582792 CNPY1Q3B7I2 92 aa10.33□□□□□ -0.76
SS18-222ENST00000582792 SPANXN2Q5MJ10 180 aa10.33□□□□□ -0.76
SS18-222ENST00000582792 GTSCR1Q86UQ5 136 aa10.33□□□□□ -0.76
SS18-222ENST00000582792 TAS2R8Q9NYW2 309 aa10.33□□□□□ -0.76
SS18-222ENST00000582792 KLK11Q9UBX7 282 aa10.33□□□□□ -0.76
SS18-222ENST00000582792 V9GYH0 126 aa10.33□□□□□ -0.76
SS18-222ENST00000582792 ANKRD34BA5PLL1 514 aa10.32□□□□□ -0.76
SS18-222ENST00000582792 SPDEFO95238 335 aa10.32□□□□□ -0.76
SS18-222ENST00000582792 CD74P04233 296 aa10.32□□□□□ -0.76
SS18-222ENST00000582792 NFYAP23511 347 aaPredicted RBP10.32□□□□□ -0.76
SS18-222ENST00000582792 FCGR2CP31995 323 aa10.32□□□□□ -0.76
SS18-222ENST00000582792 HRH1P35367 487 aa10.32□□□□□ -0.76
SS18-222ENST00000582792 TAS2R19P59542 299 aa10.32□□□□□ -0.76
SS18-222ENST00000582792 LCN12Q6JVE5 192 aa10.32□□□□□ -0.76
SS18-222ENST00000582792 ZNF645Q8N7E2 425 aa10.32□□□□□ -0.76
SS18-222ENST00000582792 POC5Q8NA72 575 aa10.32□□□□□ -0.76
SS18-222ENST00000582792 ZBTB34Q8NCN2 500 aa10.32□□□□□ -0.76
SS18-222ENST00000582792 ABHD14BQ96IU4 210 aa10.32□□□□□ -0.76
SS18-222ENST00000582792 OR2D2Q9H210 308 aa10.32□□□□□ -0.76
SS18-222ENST00000582792 ZNF355PQ9NSJ1 428 aa10.32□□□□□ -0.76
SS18-222ENST00000582792 SIGLEC8Q9NYZ4 499 aa10.32□□□□□ -0.76
SS18-222ENST00000582792 EHFQ9NZC4 300 aa10.32□□□□□ -0.76
SS18-222ENST00000582792 PTTG2Q9NZH5 202 aa10.32□□□□□ -0.76
SS18-222ENST00000582792 RBM7Q9Y580 266 aaKnown RBP10.32□□□□□ -0.76
SS18-222ENST00000582792 PROP1O75360 226 aa10.31□□□□□ -0.76
SS18-222ENST00000582792 PPYP01298 95 aa10.31□□□□□ -0.76
SS18-222ENST00000582792 PMP2P02689 132 aa10.31□□□□□ -0.76
SS18-222ENST00000582792 HLA-DMAP28067 261 aa10.31□□□□□ -0.76
SS18-222ENST00000582792 SYNJ2BPP57105 145 aa10.31□□□□□ -0.76
SS18-222ENST00000582792 FXYD3Q14802 87 aa10.31□□□□□ -0.76
SS18-222ENST00000582792 LINC00322Q6ZN03 302 aaPredicted RBP10.31□□□□□ -0.76
SS18-222ENST00000582792 Q8N402 240 aa10.31□□□□□ -0.76
SS18-222ENST00000582792 ARRDC1Q8N5I2 433 aa10.31□□□□□ -0.76
SS18-222ENST00000582792 OR6F1Q8NGZ6 308 aa10.31□□□□□ -0.76
SS18-222ENST00000582792 GRPEL2Q8TAA5 225 aa10.31□□□□□ -0.76
SS18-222ENST00000582792 DEDD2Q8WXF8 326 aa10.31□□□□□ -0.76
SS18-222ENST00000582792 BORCS5Q969J3 196 aa10.31□□□□□ -0.76
SS18-222ENST00000582792 ADTRPQ96IZ2 230 aa10.31□□□□□ -0.76
SS18-222ENST00000582792 TSNAXQ99598 290 aaKnown RBP10.31□□□□□ -0.76
SS18-222ENST00000582792 HIPK2Q9H2X6 1198 aa10.31□□□□□ -0.76
SS18-222ENST00000582792 RETNQ9HD89 108 aa10.31□□□□□ -0.76
SS18-222ENST00000582792 SDHAF2Q9NX18 166 aa10.31□□□□□ -0.76
SS18-222ENST00000582792 IGKV1-16P04430 117 aa10.3□□□□□ -0.76
SS18-222ENST00000582792 CSN3P07498 182 aa10.3□□□□□ -0.76
SS18-222ENST00000582792 AADACP22760 399 aa10.3□□□□□ -0.76
SS18-222ENST00000582792 RFX2P48378 723 aa10.3□□□□□ -0.76
SS18-222ENST00000582792 HERV-K104P61576 105 aa10.3□□□□□ -0.76
SS18-222ENST00000582792 ZNF45Q02386 682 aa10.3□□□□□ -0.76
SS18-222ENST00000582792 MEF2DQ14814 521 aa10.3□□□□□ -0.76
SS18-222ENST00000582792 ZNF79Q15937 498 aa10.3□□□□□ -0.76
SS18-222ENST00000582792 PYDC2Q56P42 97 aa10.3□□□□□ -0.76
SS18-222ENST00000582792 RNASE10Q5GAN6 216 aaKnown RBP10.3□□□□□ -0.76
SS18-222ENST00000582792 TMEM17Q86X19 198 aa10.3□□□□□ -0.76
SS18-222ENST00000582792 GDPD1Q8N9F7 314 aa10.3□□□□□ -0.76
SS18-222ENST00000582792 DRAXINQ8NBI3 349 aaPredicted RBP10.3□□□□□ -0.76
SS18-222ENST00000582792 OR5T1Q8NG75 326 aa10.3□□□□□ -0.76
SS18-222ENST00000582792 MOB3AQ96BX8 217 aa10.3□□□□□ -0.76
SS18-222ENST00000582792 ZNF2Q9BSG1 426 aaPredicted RBP10.3□□□□□ -0.76
SS18-222ENST00000582792 IGKV1D-13A0A0B4J2D9 117 aa10.29□□□□□ -0.76
SS18-222ENST00000582792 ANKRD20A5PA0PJZ0 165 aa10.29□□□□□ -0.76
SS18-222ENST00000582792 IZUMO1RA6ND01 250 aa10.29□□□□□ -0.76
SS18-222ENST00000582792 M0R1X1 148 aa10.29□□□□□ -0.76
SS18-222ENST00000582792 SLC25A17O43808 307 aa10.29□□□□□ -0.76
SS18-222ENST00000582792 BRI3O95415 125 aa10.29□□□□□ -0.76
SS18-222ENST00000582792 CD3DP04234 171 aa10.29□□□□□ -0.76
SS18-222ENST00000582792 FCER2P06734 321 aa10.29□□□□□ -0.76
SS18-222ENST00000582792 IGKV1-13P0DP09 117 aa10.29□□□□□ -0.76
SS18-222ENST00000582792 RRASP10301 218 aa10.29□□□□□ -0.76
SS18-222ENST00000582792 UCP3P55916 312 aa10.29□□□□□ -0.76
SS18-222ENST00000582792 RPS16P62249 146 aaKnown RBP10.29□□□□□ -0.76
SS18-222ENST00000582792 SSBP2P81877 361 aaPredicted RBP10.29□□□□□ -0.76
SS18-222ENST00000582792 TATDN3Q17R31 274 aa10.29□□□□□ -0.76
SS18-222ENST00000582792 STEAP1BQ6NZ63 245 aa10.29□□□□□ -0.76
SS18-222ENST00000582792 LPCAT3Q6P1A2 487 aa10.29□□□□□ -0.76
SS18-222ENST00000582792 ZNF343Q6P1L6 599 aa10.29□□□□□ -0.76
SS18-222ENST00000582792 ZNF66Q6ZN08 573 aa10.29□□□□□ -0.76
SS18-222ENST00000582792 PDPNQ86YL7 162 aa10.29□□□□□ -0.76
SS18-222ENST00000582792 C5orf30Q96GV9 206 aa10.29□□□□□ -0.76
SS18-222ENST00000582792 FAM110AQ9BQ89 295 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms