RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 QTRT1Q9BXR0 403 aaKnown RBP11.33□□□□□ -0.6
SRSF1-205ENST00000582730 ACTR3CQ9C0K3 210 aaPredicted RBP11.33□□□□□ -0.6
SRSF1-205ENST00000582730 SDF2L1Q9HCN8 221 aa11.33□□□□□ -0.6
SRSF1-205ENST00000582730 DCAF16Q9NXF7 216 aa11.33□□□□□ -0.6
SRSF1-205ENST00000582730 LAMP3Q9UQV4 416 aa11.33□□□□□ -0.6
SRSF1-205ENST00000582730 RAB29O14966 203 aa11.33□□□□□ -0.6
SRSF1-205ENST00000582730 OPN1MWP04001 364 aa11.33□□□□□ -0.6
SRSF1-205ENST00000582730 OPN1MW2P0DN77 364 aa11.33□□□□□ -0.6
SRSF1-205ENST00000582730 OPN1MW3P0DN78 364 aa11.33□□□□□ -0.6
SRSF1-205ENST00000582730 IRF2P14316 349 aa11.33□□□□□ -0.6
SRSF1-205ENST00000582730 ZNF134P52741 427 aa11.33□□□□□ -0.6
SRSF1-205ENST00000582730 RAB4BP61018 213 aa11.33□□□□□ -0.6
SRSF1-205ENST00000582730 TLE1Q04724 770 aa11.33□□□□□ -0.6
SRSF1-205ENST00000582730 TMEM108Q6UXF1 575 aa11.33□□□□□ -0.6
SRSF1-205ENST00000582730 TMEM14EPQ6UXP3 125 aa11.33□□□□□ -0.6
SRSF1-205ENST00000582730 FAM90A1Q86YD7 464 aa11.33□□□□□ -0.6
SRSF1-205ENST00000582730 OR10P1Q8NGE3 313 aa11.33□□□□□ -0.6
SRSF1-205ENST00000582730 OR10A7Q8NGE5 316 aa11.33□□□□□ -0.6
SRSF1-205ENST00000582730 HIPK2Q9H2X6 1198 aa11.33□□□□□ -0.6
SRSF1-205ENST00000582730 OR6C3Q9NZP0 311 aa11.33□□□□□ -0.6
SRSF1-205ENST00000582730 BEND2Q8NDZ0 799 aa11.32□□□□□ -0.6
SRSF1-205ENST00000582730 OR1P1Q8NH06 330 aa11.32□□□□□ -0.6
SRSF1-205ENST00000582730 TMEM68Q96MH6 324 aa11.32□□□□□ -0.6
SRSF1-205ENST00000582730 C16orf97H3BN30 126 aa11.32□□□□□ -0.6
SRSF1-205ENST00000582730 PROP1O75360 226 aa11.32□□□□□ -0.6
SRSF1-205ENST00000582730 P0C879 139 aa11.32□□□□□ -0.6
SRSF1-205ENST00000582730 BCL2P10415 239 aa11.32□□□□□ -0.6
SRSF1-205ENST00000582730 CFHR2P36980 270 aa11.32□□□□□ -0.6
SRSF1-205ENST00000582730 GNG10P50151 68 aa11.32□□□□□ -0.6
SRSF1-205ENST00000582730 PRR30Q53SZ7 412 aaPredicted RBP11.32□□□□□ -0.6
SRSF1-205ENST00000582730 DPPA3Q6W0C5 159 aa11.32□□□□□ -0.6
SRSF1-205ENST00000582730 SSX7Q7RTT5 188 aa11.32□□□□□ -0.6
SRSF1-205ENST00000582730 FAM216BQ8N7L0 139 aa11.32□□□□□ -0.6
SRSF1-205ENST00000582730 CISD1Q9NZ45 108 aaKnown RBP11.32□□□□□ -0.6
SRSF1-205ENST00000582730 PKDREJQ9NTG1 2253 aa11.31□□□□□ -0.6
SRSF1-205ENST00000582730 TRAV1-1A0A0B4J248 108 aa11.31□□□□□ -0.6
SRSF1-205ENST00000582730 OR9G9P0C7N8 305 aa11.31□□□□□ -0.6
SRSF1-205ENST00000582730 ERVK-16P61578 105 aa11.31□□□□□ -0.6
SRSF1-205ENST00000582730 WDR25Q64LD2 544 aaPredicted RBP11.31□□□□□ -0.6
SRSF1-205ENST00000582730 GAB2Q9UQC2 676 aa11.31□□□□□ -0.6
SRSF1-205ENST00000582730 LHBP01229 141 aa11.31□□□□□ -0.6
SRSF1-205ENST00000582730 ZNF726P1Q15940 193 aa11.31□□□□□ -0.6
SRSF1-205ENST00000582730 TCTEX1D1Q8N7M0 179 aa11.31□□□□□ -0.6
SRSF1-205ENST00000582730 OR4A16Q8NH70 328 aa11.31□□□□□ -0.6
SRSF1-205ENST00000582730 S1PR3Q99500 378 aa11.31□□□□□ -0.6
SRSF1-205ENST00000582730 PSMG3Q9BT73 122 aaPredicted RBP11.31□□□□□ -0.6
SRSF1-205ENST00000582730 DSCAMO60469 2012 aa11.31□□□□□ -0.6
SRSF1-205ENST00000582730 TRGV10A0A0A0MS01 117 aa11.31□□□□□ -0.6
SRSF1-205ENST00000582730 MAP1LC3B2A6NCE7 125 aa11.31□□□□□ -0.6
SRSF1-205ENST00000582730 YPEL1O60688 119 aa11.31□□□□□ -0.6
SRSF1-205ENST00000582730 LOXL3P58215 753 aa11.31□□□□□ -0.6
SRSF1-205ENST00000582730 CYB5R2Q6BCY4 276 aa11.31□□□□□ -0.6
SRSF1-205ENST00000582730 SPACA3Q8IXA5 215 aa11.31□□□□□ -0.6
SRSF1-205ENST00000582730 YPEL2Q96QA6 119 aa11.31□□□□□ -0.6
SRSF1-205ENST00000582730 MAP1LC3BQ9GZQ8 125 aa11.31□□□□□ -0.6
SRSF1-205ENST00000582730 IFI27L2Q9H2X8 130 aa11.31□□□□□ -0.6
SRSF1-205ENST00000582730 SRD5A3Q9H8P0 318 aa11.31□□□□□ -0.6
SRSF1-205ENST00000582730 IL19Q9UHD0 177 aa11.31□□□□□ -0.6
SRSF1-205ENST00000582730 DCHS1Q96JQ0 3298 aa11.3□□□□□ -0.6
SRSF1-205ENST00000582730 XKRY2A2RUG3 117 aa11.3□□□□□ -0.6
SRSF1-205ENST00000582730 SERF2P84101 59 aa11.3□□□□□ -0.6
SRSF1-205ENST00000582730 TMEM41BQ5BJD5 291 aa11.3□□□□□ -0.6
SRSF1-205ENST00000582730 LYG1Q8N1E2 194 aa11.3□□□□□ -0.6
SRSF1-205ENST00000582730 SNRNP40Q96DI7 357 aaKnown RBP11.3□□□□□ -0.6
SRSF1-205ENST00000582730 CIB3Q96Q77 187 aaPredicted RBP11.3□□□□□ -0.6
SRSF1-205ENST00000582730 TMEM147Q9BVK8 224 aa11.3□□□□□ -0.6
SRSF1-205ENST00000582730 SCNM1Q9BWG6 230 aa11.3□□□□□ -0.6
SRSF1-205ENST00000582730 SLC25A22Q9H936 323 aa11.3□□□□□ -0.6
SRSF1-205ENST00000582730 SLC39A9Q9NUM3 307 aa11.3□□□□□ -0.6
SRSF1-205ENST00000582730 CUL9Q8IWT3 2517 aa11.3□□□□□ -0.6
SRSF1-205ENST00000582730 HPRT1P00492 218 aa11.3□□□□□ -0.6
SRSF1-205ENST00000582730 G0S2P27469 103 aa11.3□□□□□ -0.6
SRSF1-205ENST00000582730 TFF3Q07654 80 aa11.3□□□□□ -0.6
SRSF1-205ENST00000582730 MRGPRGQ86SM5 289 aa11.3□□□□□ -0.6
SRSF1-205ENST00000582730 NECAP1Q8NC96 275 aa11.3□□□□□ -0.6
SRSF1-205ENST00000582730 PINX1Q96BK5 328 aaKnown RBP11.3□□□□□ -0.6
SRSF1-205ENST00000582730 TMPRSS2O15393 492 aa11.29□□□□□ -0.6
SRSF1-205ENST00000582730 BSPH1Q075Z2 132 aa11.29□□□□□ -0.6
SRSF1-205ENST00000582730 C3orf36Q3SXR2 165 aa11.29□□□□□ -0.6
SRSF1-205ENST00000582730 ZNF709Q8N972 641 aa11.29□□□□□ -0.6
SRSF1-205ENST00000582730 Q8NA96 180 aa11.29□□□□□ -0.6
SRSF1-205ENST00000582730 LHX4Q969G2 390 aa11.29□□□□□ -0.6
SRSF1-205ENST00000582730 CTDSP1Q9GZU7 261 aa11.29□□□□□ -0.6
SRSF1-205ENST00000582730 OR4A8P0C604 315 aa11.29□□□□□ -0.6
SRSF1-205ENST00000582730 TDGF1P3P51864 188 aa11.29□□□□□ -0.6
SRSF1-205ENST00000582730 PAX5Q02548 391 aa11.29□□□□□ -0.6
SRSF1-205ENST00000582730 C17orf58Q2M2W7 97 aa11.29□□□□□ -0.6
SRSF1-205ENST00000582730 HEYLQ9NQ87 328 aaPredicted RBP11.29□□□□□ -0.6
SRSF1-205ENST00000582730 YLPM1P49750 1951 aaKnown RBP11.29□□□□□ -0.6
SRSF1-205ENST00000582730 SPTA1P02549 2419 aa11.29□□□□□ -0.6
SRSF1-205ENST00000582730 DPRXA6NFQ7 191 aa11.29□□□□□ -0.6
SRSF1-205ENST00000582730 F2RL2O00254 374 aa11.29□□□□□ -0.6
SRSF1-205ENST00000582730 GCGP01275 180 aa11.29□□□□□ -0.6
SRSF1-205ENST00000582730 PFN1P07737 140 aaKnown RBP11.29□□□□□ -0.6
SRSF1-205ENST00000582730 ACSM6Q6P461 480 aa11.29□□□□□ -0.6
SRSF1-205ENST00000582730 RBM14Q96PK6 669 aaKnown RBP11.29□□□□□ -0.6
SRSF1-205ENST00000582730 TRAV3A0A0B4J244 114 aa11.28□□□□□ -0.6
SRSF1-205ENST00000582730 IGKV1D-33P01593 117 aa11.28□□□□□ -0.6
SRSF1-205ENST00000582730 IGKV1-33P01594 117 aa11.28□□□□□ -0.6
SRSF1-205ENST00000582730 DEFA4P12838 97 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms