RNA–Protein interactions for RNA: ENST00000581039.1

RFFL-208, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 424 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-208ENST00000581039 ELLP55199 621 aaPredicted RBP7.35□□□□□ -1.23
RFFL-208ENST00000581039 C2orf76Q3KRA6 126 aa7.35□□□□□ -1.23
RFFL-208ENST00000581039 LAMTOR1Q6IAA8 161 aa7.35□□□□□ -1.23
RFFL-208ENST00000581039 UNQ9165/PRO28630Q6UXU0 137 aa7.35□□□□□ -1.23
RFFL-208ENST00000581039 VKORC1L1Q8N0U8 176 aa7.35□□□□□ -1.23
RFFL-208ENST00000581039 VSTM2AQ8TAG5 236 aa7.35□□□□□ -1.23
RFFL-208ENST00000581039 C11orf45Q8TAV5 145 aa7.35□□□□□ -1.23
RFFL-208ENST00000581039 MAFIPQ8WZ33 124 aa7.35□□□□□ -1.23
RFFL-208ENST00000581039 FAM3DQ96BQ1 224 aa7.35□□□□□ -1.23
RFFL-208ENST00000581039 RAB3CQ96E17 227 aa7.35□□□□□ -1.23
RFFL-208ENST00000581039 CXorf58Q96LI9 332 aa7.35□□□□□ -1.23
RFFL-208ENST00000581039 OR2A7Q96R45 310 aa7.35□□□□□ -1.23
RFFL-208ENST00000581039 MFFQ9GZY8 342 aa7.35□□□□□ -1.23
RFFL-208ENST00000581039 FBXL17Q9UF56 701 aa7.35□□□□□ -1.23
RFFL-208ENST00000581039 MRPS7Q9Y2R9 242 aaKnown RBP7.35□□□□□ -1.23
RFFL-208ENST00000581039 KCNK7Q9Y2U2 307 aa7.35□□□□□ -1.23
RFFL-208ENST00000581039 AK6Q9Y3D8 172 aaKnown RBP7.35□□□□□ -1.23
RFFL-208ENST00000581039 E7EUB6 86 aa7.34□□□□□ -1.23
RFFL-208ENST00000581039 J3QRK9 145 aa7.34□□□□□ -1.23
RFFL-208ENST00000581039 TSPAN4O14817 238 aa7.34□□□□□ -1.23
RFFL-208ENST00000581039 KBTBD11O94819 623 aa7.34□□□□□ -1.23
RFFL-208ENST00000581039 ZNF735P0CB33 412 aa7.34□□□□□ -1.23
RFFL-208ENST00000581039 AREGP15514 252 aa7.34□□□□□ -1.23
RFFL-208ENST00000581039 TALDO1P37837 337 aa7.34□□□□□ -1.23
RFFL-208ENST00000581039 PSMD7P51665 324 aa7.34□□□□□ -1.23
RFFL-208ENST00000581039 CLDN12P56749 244 aa7.34□□□□□ -1.23
RFFL-208ENST00000581039 NANOS2P60321 138 aaKnown RBP7.34□□□□□ -1.23
RFFL-208ENST00000581039 PRR20EP86478 221 aa7.34□□□□□ -1.23
RFFL-208ENST00000581039 PRR20CP86479 221 aa7.34□□□□□ -1.23
RFFL-208ENST00000581039 PRR20DP86480 221 aa7.34□□□□□ -1.23
RFFL-208ENST00000581039 PRR20BP86481 221 aa7.34□□□□□ -1.23
RFFL-208ENST00000581039 PRR20AP86496 221 aa7.34□□□□□ -1.23
RFFL-208ENST00000581039 ARFRP1Q13795 201 aa7.34□□□□□ -1.23
RFFL-208ENST00000581039 RBMS2Q15434 407 aaKnown RBP7.34□□□□□ -1.23
RFFL-208ENST00000581039 OR2B11Q5JQS5 317 aa7.34□□□□□ -1.23
RFFL-208ENST00000581039 PLET1Q6UQ28 207 aa7.34□□□□□ -1.23
RFFL-208ENST00000581039 KCTD9Q7L273 389 aa7.34□□□□□ -1.23
RFFL-208ENST00000581039 H1FOOQ8IZA3 346 aaPredicted RBP7.34□□□□□ -1.23
RFFL-208ENST00000581039 DHRSXQ8N5I4 330 aa7.34□□□□□ -1.23
RFFL-208ENST00000581039 BPIFB6Q8NFQ5 453 aa7.34□□□□□ -1.23
RFFL-208ENST00000581039 C2CD4CQ8TF44 421 aa7.34□□□□□ -1.23
RFFL-208ENST00000581039 TMEM203Q969S6 136 aa7.34□□□□□ -1.23
RFFL-208ENST00000581039 GALNT14Q96FL9 552 aa7.34□□□□□ -1.23
RFFL-208ENST00000581039 GFI1Q99684 422 aa7.34□□□□□ -1.23
RFFL-208ENST00000581039 MND1Q9BWT6 205 aa7.34□□□□□ -1.23
RFFL-208ENST00000581039 C6orf62Q9GZU0 229 aaPredicted RBP7.34□□□□□ -1.23
RFFL-208ENST00000581039 MAP6D1Q9H9H5 199 aa7.34□□□□□ -1.23
RFFL-208ENST00000581039 PLCXD1Q9NUJ7 323 aa7.34□□□□□ -1.23
RFFL-208ENST00000581039 RAB22AQ9UL26 194 aa7.34□□□□□ -1.23
RFFL-208ENST00000581039 A0A075B6Q4 140 aa7.33□□□□□ -1.24
RFFL-208ENST00000581039 IGHV3-35A0A0C4DH35 117 aa7.33□□□□□ -1.24
RFFL-208ENST00000581039 MFSD2BA6NFX1 497 aa7.33□□□□□ -1.24
RFFL-208ENST00000581039 OR4C46A6NHA9 309 aa7.33□□□□□ -1.24
RFFL-208ENST00000581039 GNB3P16520 340 aa7.33□□□□□ -1.24
RFFL-208ENST00000581039 CD36P16671 472 aa7.33□□□□□ -1.24
RFFL-208ENST00000581039 CTRB1P17538 263 aa7.33□□□□□ -1.24
RFFL-208ENST00000581039 CRHBPP24387 322 aa7.33□□□□□ -1.24
RFFL-208ENST00000581039 GADD45AP24522 165 aa7.33□□□□□ -1.24
RFFL-208ENST00000581039 GPR183P32249 361 aa7.33□□□□□ -1.24
RFFL-208ENST00000581039 TCTAP57738 103 aa7.33□□□□□ -1.24
RFFL-208ENST00000581039 SPHARQ15513 63 aa7.33□□□□□ -1.24
RFFL-208ENST00000581039 SSX1Q16384 188 aa7.33□□□□□ -1.24
RFFL-208ENST00000581039 KLK9Q2XQG4 91 aa7.33□□□□□ -1.24
RFFL-208ENST00000581039 CTRB2Q6GPI1 263 aa7.33□□□□□ -1.24
RFFL-208ENST00000581039 ZNF645Q8N7E2 425 aa7.33□□□□□ -1.24
RFFL-208ENST00000581039 OR5B3Q8NH48 314 aa7.33□□□□□ -1.24
RFFL-208ENST00000581039 TMEM167AQ8TBQ9 72 aa7.33□□□□□ -1.24
RFFL-208ENST00000581039 RARRES2Q99969 163 aa7.33□□□□□ -1.24
RFFL-208ENST00000581039 CSTL1Q9H114 145 aa7.33□□□□□ -1.24
RFFL-208ENST00000581039 KLK9Q9UKQ9 250 aa7.33□□□□□ -1.24
RFFL-208ENST00000581039 IGLV11-55A0A075B6I3 123 aa7.32□□□□□ -1.24
RFFL-208ENST00000581039 TMEM272A0A1B0GTI8 110 aa7.32□□□□□ -1.24
RFFL-208ENST00000581039 A0A1B0GW64 132 aa7.32□□□□□ -1.24
RFFL-208ENST00000581039 MPTX1A8MV57 137 aa7.32□□□□□ -1.24
RFFL-208ENST00000581039 RAB27BO00194 218 aa7.32□□□□□ -1.24
RFFL-208ENST00000581039 ARL6IP5O75915 188 aa7.32□□□□□ -1.24
RFFL-208ENST00000581039 SLC22A5O76082 557 aa7.32□□□□□ -1.24
RFFL-208ENST00000581039 HRASP01112 189 aa7.32□□□□□ -1.24
RFFL-208ENST00000581039 REG1AP05451 166 aa7.32□□□□□ -1.24
RFFL-208ENST00000581039 FCGR2BP31994 310 aaPredicted RBP7.32□□□□□ -1.24
RFFL-208ENST00000581039 RPL30P62888 115 aaKnown RBP7.32□□□□□ -1.24
RFFL-208ENST00000581039 RPL8P62917 257 aaKnown RBP7.32□□□□□ -1.24
RFFL-208ENST00000581039 ODF3L2Q3SX64 289 aa7.32□□□□□ -1.24
RFFL-208ENST00000581039 LAIR2Q6ISS4 152 aa7.32□□□□□ -1.24
RFFL-208ENST00000581039 C8orf59Q8N0T1 100 aaPredicted RBP7.32□□□□□ -1.24
RFFL-208ENST00000581039 PUSL1Q8N0Z8 303 aaKnown RBP7.32□□□□□ -1.24
RFFL-208ENST00000581039 OR10R2Q8NGX6 335 aa7.32□□□□□ -1.24
RFFL-208ENST00000581039 OR4S2Q8NH73 311 aa7.32□□□□□ -1.24
RFFL-208ENST00000581039 ZNF502Q8TBZ5 544 aa7.32□□□□□ -1.24
RFFL-208ENST00000581039 UFD1Q92890 307 aa7.32□□□□□ -1.24
RFFL-208ENST00000581039 THYN1Q9P016 225 aa7.32□□□□□ -1.24
RFFL-208ENST00000581039 RBMX2Q9Y388 322 aaKnown RBP7.32□□□□□ -1.24
RFFL-208ENST00000581039 HECTD4Q9Y4D8 3996 aa7.32□□□□□ -1.24
RFFL-208ENST00000581039 VPS13DQ5THJ4 4388 aa7.31□□□□□ -1.24
RFFL-208ENST00000581039 HLA-DQB1P01920 261 aa7.31□□□□□ -1.24
RFFL-208ENST00000581039 RPA2P15927 270 aa7.31□□□□□ -1.24
RFFL-208ENST00000581039 HLA-GP17693 338 aa7.31□□□□□ -1.24
RFFL-208ENST00000581039 PTBP1P26599 531 aaKnown RBP eCLIP7.31□□□□□ -1.24
RFFL-208ENST00000581039 CMC4P56277 68 aaPredicted RBP7.31□□□□□ -1.24
RFFL-208ENST00000581039 PLA2G7Q13093 441 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms