RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 SPART-AS1P0CW21 52 aa9.86□□□□□ -0.83
CSNK1D-213ENST00000580446 RPL27AP46776 148 aaKnown RBP9.86□□□□□ -0.83
CSNK1D-213ENST00000580446 FAM3BP58499 235 aaPredicted RBP9.86□□□□□ -0.83
CSNK1D-213ENST00000580446 CDK10Q15131 360 aa9.86□□□□□ -0.83
CSNK1D-213ENST00000580446 OR2B11Q5JQS5 317 aa9.86□□□□□ -0.83
CSNK1D-213ENST00000580446 LIPKQ5VXJ0 399 aa9.86□□□□□ -0.83
CSNK1D-213ENST00000580446 MMD2Q8IY49 270 aa9.86□□□□□ -0.83
CSNK1D-213ENST00000580446 PTX4Q96A99 478 aa9.86□□□□□ -0.83
CSNK1D-213ENST00000580446 KRTAP9-2Q9BYQ4 174 aa9.86□□□□□ -0.83
CSNK1D-213ENST00000580446 TRAV8-7A0A075B6U6 113 aa9.85□□□□□ -0.83
CSNK1D-213ENST00000580446 IGHV7-4-1A0A0J9YVY3 117 aa9.85□□□□□ -0.83
CSNK1D-213ENST00000580446 LINC00473A8K010 186 aa9.85□□□□□ -0.83
CSNK1D-213ENST00000580446 B2RBV5 119 aa9.85□□□□□ -0.83
CSNK1D-213ENST00000580446 J3QRE1 110 aa9.85□□□□□ -0.83
CSNK1D-213ENST00000580446 FAM107AO95990 144 aa9.85□□□□□ -0.83
CSNK1D-213ENST00000580446 POLR2IP36954 125 aaKnown RBP9.85□□□□□ -0.83
CSNK1D-213ENST00000580446 PSMD7P51665 324 aa9.85□□□□□ -0.83
CSNK1D-213ENST00000580446 HLA-DRB3P79483 266 aa9.85□□□□□ -0.83
CSNK1D-213ENST00000580446 GPR176Q14439 515 aa9.85□□□□□ -0.83
CSNK1D-213ENST00000580446 OR2G6Q5TZ20 316 aa9.85□□□□□ -0.83
CSNK1D-213ENST00000580446 OR10K2Q6IF99 312 aa9.85□□□□□ -0.83
CSNK1D-213ENST00000580446 ZNF880Q6PDB4 577 aa9.85□□□□□ -0.83
CSNK1D-213ENST00000580446 TCF24Q7RTU0 167 aa9.85□□□□□ -0.83
CSNK1D-213ENST00000580446 TMEM116Q8NCL8 245 aa9.85□□□□□ -0.83
CSNK1D-213ENST00000580446 CXorf58Q96LI9 332 aa9.85□□□□□ -0.83
CSNK1D-213ENST00000580446 LINC00588Q9Y4M8 146 aa9.85□□□□□ -0.83
CSNK1D-213ENST00000580446 NAPSAO96009 420 aa9.84□□□□□ -0.83
CSNK1D-213ENST00000580446 CRYGCP07315 174 aa9.84□□□□□ -0.83
CSNK1D-213ENST00000580446 PRDX6P30041 224 aa9.84□□□□□ -0.83
CSNK1D-213ENST00000580446 ACTL10Q5JWF8 245 aa9.84□□□□□ -0.83
CSNK1D-213ENST00000580446 FAM222AQ5U5X8 452 aa9.84□□□□□ -0.83
CSNK1D-213ENST00000580446 FAM90A2PQ658T7 463 aa9.84□□□□□ -0.83
CSNK1D-213ENST00000580446 LILRB2Q8N423 598 aa9.84□□□□□ -0.83
CSNK1D-213ENST00000580446 CANT1Q8WVQ1 401 aa9.84□□□□□ -0.83
CSNK1D-213ENST00000580446 ZNF414Q96IQ9 312 aa9.84□□□□□ -0.83
CSNK1D-213ENST00000580446 DCUN1D5Q9BTE7 237 aa9.84□□□□□ -0.83
CSNK1D-213ENST00000580446 MS4A6AQ9H2W1 248 aa9.84□□□□□ -0.83
CSNK1D-213ENST00000580446 KCNK15Q9H427 330 aa9.84□□□□□ -0.83
CSNK1D-213ENST00000580446 XCL2Q9UBD3 114 aa9.84□□□□□ -0.83
CSNK1D-213ENST00000580446 RPS10-NUDT3A0A1W2PQS6 291 aa9.83□□□□□ -0.84
CSNK1D-213ENST00000580446 NDUFA4O00483 81 aa9.83□□□□□ -0.84
CSNK1D-213ENST00000580446 NUPL2O15504 423 aaKnown RBP9.83□□□□□ -0.84
CSNK1D-213ENST00000580446 NUDT3O95989 172 aa9.83□□□□□ -0.84
CSNK1D-213ENST00000580446 SPP1P10451 314 aa9.83□□□□□ -0.84
CSNK1D-213ENST00000580446 BTF3P20290 206 aaKnown RBP9.83□□□□□ -0.84
CSNK1D-213ENST00000580446 XAF1Q6GPH4 301 aa9.83□□□□□ -0.84
CSNK1D-213ENST00000580446 UBAC2Q8NBM4 344 aa9.83□□□□□ -0.84
CSNK1D-213ENST00000580446 CCDC124Q96CT7 223 aaKnown RBP9.83□□□□□ -0.84
CSNK1D-213ENST00000580446 IGHV3OR16-12A0A075B7B8 117 aa9.82□□□□□ -0.84
CSNK1D-213ENST00000580446 A0A1W2PPK0 400 aa9.82□□□□□ -0.84
CSNK1D-213ENST00000580446 CGB1A6NKQ9 187 aa9.82□□□□□ -0.84
CSNK1D-213ENST00000580446 HMGB1P1B2RPK0 211 aaPredicted RBP9.82□□□□□ -0.84
CSNK1D-213ENST00000580446 DNASE2O00115 360 aaPredicted RBP9.82□□□□□ -0.84
CSNK1D-213ENST00000580446 DHFRP00374 187 aa9.82□□□□□ -0.84
CSNK1D-213ENST00000580446 APOHP02749 345 aaPredicted RBP9.82□□□□□ -0.84
CSNK1D-213ENST00000580446 CD2P06729 351 aa9.82□□□□□ -0.84
CSNK1D-213ENST00000580446 ZNF735P0CB33 412 aa9.82□□□□□ -0.84
CSNK1D-213ENST00000580446 HIST1H1BP16401 226 aaKnown RBP9.82□□□□□ -0.84
CSNK1D-213ENST00000580446 MNAT1P51948 309 aa9.82□□□□□ -0.84
CSNK1D-213ENST00000580446 RPL11P62913 178 aaKnown RBP9.82□□□□□ -0.84
CSNK1D-213ENST00000580446 UBE2UQ5VVX9 321 aa9.82□□□□□ -0.84
CSNK1D-213ENST00000580446 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.82□□□□□ -0.84
CSNK1D-213ENST00000580446 OR8J1Q8NGP2 316 aa9.82□□□□□ -0.84
CSNK1D-213ENST00000580446 GPR148Q8TDV2 347 aa9.82□□□□□ -0.84
CSNK1D-213ENST00000580446 CMTM3Q96MX0 182 aa9.82□□□□□ -0.84
CSNK1D-213ENST00000580446 NIPSNAP3BQ9BS92 247 aa9.82□□□□□ -0.84
CSNK1D-213ENST00000580446 RABAC1Q9UI14 185 aa9.82□□□□□ -0.84
CSNK1D-213ENST00000580446 K7EMT4 169 aa9.81□□□□□ -0.84
CSNK1D-213ENST00000580446 CREBL2O60519 120 aaPredicted RBP9.81□□□□□ -0.84
CSNK1D-213ENST00000580446 YIF1AO95070 293 aa9.81□□□□□ -0.84
CSNK1D-213ENST00000580446 IGFBP3P17936 291 aaPredicted RBP9.81□□□□□ -0.84
CSNK1D-213ENST00000580446 ACBD7Q8N6N7 88 aa9.81□□□□□ -0.84
CSNK1D-213ENST00000580446 ST8SIA2Q92186 375 aa9.81□□□□□ -0.84
CSNK1D-213ENST00000580446 PGPEP1Q9NXJ5 209 aa9.81□□□□□ -0.84
CSNK1D-213ENST00000580446 DKK2Q9UBU2 259 aa9.81□□□□□ -0.84
CSNK1D-213ENST00000580446 AK3Q9UIJ7 227 aa9.81□□□□□ -0.84
CSNK1D-213ENST00000580446 KRTAP9-6A0A140TA67 174 aa9.8□□□□□ -0.84
CSNK1D-213ENST00000580446 FCGR3BO75015 233 aa9.8□□□□□ -0.84
CSNK1D-213ENST00000580446 DFFBO76075 338 aa9.8□□□□□ -0.84
CSNK1D-213ENST00000580446 ZNF688P0C7X2 276 aa9.8□□□□□ -0.84
CSNK1D-213ENST00000580446 DNAH10OSP0CZ25 163 aa9.8□□□□□ -0.84
CSNK1D-213ENST00000580446 CRHBPP24387 322 aa9.8□□□□□ -0.84
CSNK1D-213ENST00000580446 PTBP1P26599 531 aaKnown RBP eCLIP9.8□□□□□ -0.84
CSNK1D-213ENST00000580446 HTR2CP28335 458 aa9.8□□□□□ -0.84
CSNK1D-213ENST00000580446 TMEM41BQ5BJD5 291 aa9.8□□□□□ -0.84
CSNK1D-213ENST00000580446 RFKQ969G6 155 aa9.8□□□□□ -0.84
CSNK1D-213ENST00000580446 OR51E2Q9H255 320 aa9.8□□□□□ -0.84
CSNK1D-213ENST00000580446 LRP2P98164 4655 aa9.79□□□□□ -0.84
CSNK1D-213ENST00000580446 C15orf62A8K5M9 175 aa9.79□□□□□ -0.84
CSNK1D-213ENST00000580446 J3QRK9 145 aa9.79□□□□□ -0.84
CSNK1D-213ENST00000580446 BET1O15155 118 aa9.79□□□□□ -0.84
CSNK1D-213ENST00000580446 RRASP10301 218 aa9.79□□□□□ -0.84
CSNK1D-213ENST00000580446 DUTP33316 252 aaKnown RBP9.79□□□□□ -0.84
CSNK1D-213ENST00000580446 OR2B8PP59922 312 aa9.79□□□□□ -0.84
CSNK1D-213ENST00000580446 PAFAH1B2P68402 229 aa9.79□□□□□ -0.84
CSNK1D-213ENST00000580446 KLK9Q2XQG4 91 aa9.79□□□□□ -0.84
CSNK1D-213ENST00000580446 MOB1BQ7L9L4 216 aa9.79□□□□□ -0.84
CSNK1D-213ENST00000580446 OSR1Q8TAX0 266 aaPredicted RBP9.79□□□□□ -0.84
CSNK1D-213ENST00000580446 DNAJC9Q8WXX5 260 aa9.79□□□□□ -0.84
CSNK1D-213ENST00000580446 LGALS12Q96DT0 336 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms