RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 HMX3A6NHT5 357 aa13.45□□□□□ -0.26
MKS1-209ENST00000580127 KBTBD11O94819 623 aa13.45□□□□□ -0.26
MKS1-209ENST00000580127 NDUFB8O95169 186 aa13.45□□□□□ -0.26
MKS1-209ENST00000580127 HLA-AP01891 365 aaKnown RBP13.45□□□□□ -0.26
MKS1-209ENST00000580127 HLA-DQB1P01920 261 aa13.45□□□□□ -0.26
MKS1-209ENST00000580127 RAB3BP20337 219 aa13.45□□□□□ -0.26
MKS1-209ENST00000580127 CDNFQ49AH0 187 aa13.45□□□□□ -0.26
MKS1-209ENST00000580127 SLC38A6Q8IZM9 456 aa13.45□□□□□ -0.26
MKS1-209ENST00000580127 UXS1Q8NBZ7 420 aa13.45□□□□□ -0.26
MKS1-209ENST00000580127 TCTEX1D2Q8WW35 142 aa13.45□□□□□ -0.26
MKS1-209ENST00000580127 CXorf65A6NEN9 183 aa13.44□□□□□ -0.26
MKS1-209ENST00000580127 CYB5BO43169 146 aa13.44□□□□□ -0.26
MKS1-209ENST00000580127 SCGNO76038 276 aa13.44□□□□□ -0.26
MKS1-209ENST00000580127 CRHBPP24387 322 aa13.44□□□□□ -0.26
MKS1-209ENST00000580127 PLA2G7Q13093 441 aa13.44□□□□□ -0.26
MKS1-209ENST00000580127 OR2B11Q5JQS5 317 aa13.44□□□□□ -0.26
MKS1-209ENST00000580127 C10orf55Q5SWW7 151 aa13.44□□□□□ -0.26
MKS1-209ENST00000580127 CNIH2Q6PI25 160 aa13.44□□□□□ -0.26
MKS1-209ENST00000580127 TMEM167AQ8TBQ9 72 aa13.44□□□□□ -0.26
MKS1-209ENST00000580127 THYN1Q9P016 225 aa13.44□□□□□ -0.26
MKS1-209ENST00000580127 DMRT1Q9Y5R6 373 aa13.44□□□□□ -0.26
MKS1-209ENST00000580127 CRYGCP07315 174 aa13.43□□□□□ -0.26
MKS1-209ENST00000580127 GALP22466 123 aa13.43□□□□□ -0.26
MKS1-209ENST00000580127 PSMB6P28072 239 aa13.43□□□□□ -0.26
MKS1-209ENST00000580127 APOC4P55056 127 aa13.43□□□□□ -0.26
MKS1-209ENST00000580127 RPL8P62917 257 aaKnown RBP13.43□□□□□ -0.26
MKS1-209ENST00000580127 HACD4Q5VWC8 232 aa13.43□□□□□ -0.26
MKS1-209ENST00000580127 ZNF66Q6ZN08 573 aa13.43□□□□□ -0.26
MKS1-209ENST00000580127 TMEM61Q8N0U2 210 aa13.43□□□□□ -0.26
MKS1-209ENST00000580127 VKORC1L1Q8N0U8 176 aa13.43□□□□□ -0.26
MKS1-209ENST00000580127 LYSTQ99698 3801 aa13.43□□□□□ -0.26
MKS1-209ENST00000580127 OVOL2Q9BRP0 275 aa13.43□□□□□ -0.26
MKS1-209ENST00000580127 WFDC10AQ9H1F0 79 aa13.43□□□□□ -0.26
MKS1-209ENST00000580127 EPPK1P58107 5090 aaKnown RBP13.43□□□□□ -0.26
MKS1-209ENST00000580127 NUPR2A6NF83 97 aa13.42□□□□□ -0.26
MKS1-209ENST00000580127 A8MWP6 167 aa13.42□□□□□ -0.26
MKS1-209ENST00000580127 TEX22C9J3V5 150 aa13.42□□□□□ -0.26
MKS1-209ENST00000580127 LY6G6CO95867 125 aa13.42□□□□□ -0.26
MKS1-209ENST00000580127 CLEC3BP05452 202 aa13.42□□□□□ -0.26
MKS1-209ENST00000580127 IL6RP08887 468 aaPredicted RBP13.42□□□□□ -0.26
MKS1-209ENST00000580127 ZNF735P0CB33 412 aa13.42□□□□□ -0.26
MKS1-209ENST00000580127 MYOD1P15172 320 aa13.42□□□□□ -0.26
MKS1-209ENST00000580127 NFYAP23511 347 aaPredicted RBP13.42□□□□□ -0.26
MKS1-209ENST00000580127 PUSL1Q8N0Z8 303 aaKnown RBP13.42□□□□□ -0.26
MKS1-209ENST00000580127 MFSD4AQ8N468 514 aa13.42□□□□□ -0.26
MKS1-209ENST00000580127 OR1L6Q8NGR2 347 aa13.42□□□□□ -0.26
MKS1-209ENST00000580127 OR4A5Q8NH83 315 aa13.42□□□□□ -0.26
MKS1-209ENST00000580127 MRPL27Q9P0M9 148 aaKnown RBP13.42□□□□□ -0.26
MKS1-209ENST00000580127 BLOC1S6Q9UL45 172 aa13.42□□□□□ -0.26
MKS1-209ENST00000580127 SPATA2Q9UM82 520 aa13.42□□□□□ -0.26
MKS1-209ENST00000580127 UFC1Q9Y3C8 167 aa13.42□□□□□ -0.26
MKS1-209ENST00000580127 BIRC6Q9NR09 4857 aa13.42□□□□□ -0.26
MKS1-209ENST00000580127 DNAH1Q9P2D7 4330 aa13.41□□□□□ -0.26
MKS1-209ENST00000580127 TRDV1A0A1B0GX56 115 aa13.41□□□□□ -0.26
MKS1-209ENST00000580127 SCAF4O95104 1147 aaKnown RBP13.41□□□□□ -0.26
MKS1-209ENST00000580127 IGHV3-23P01764 117 aa13.41□□□□□ -0.26
MKS1-209ENST00000580127 ELLP55199 621 aaPredicted RBP13.41□□□□□ -0.26
MKS1-209ENST00000580127 OR10A3P58181 314 aa13.41□□□□□ -0.26
MKS1-209ENST00000580127 TM4SF20Q53R12 229 aa13.41□□□□□ -0.26
MKS1-209ENST00000580127 ZNF367Q7RTV3 350 aa13.41□□□□□ -0.26
MKS1-209ENST00000580127 LINC00476Q8WZB0 136 aa13.41□□□□□ -0.26
MKS1-209ENST00000580127 FANCD2OSQ96PS1 177 aa13.41□□□□□ -0.26
MKS1-209ENST00000580127 HRASLSQ9HDD0 168 aa13.41□□□□□ -0.26
MKS1-209ENST00000580127 TP53TG1Q9Y2A0 90 aa13.41□□□□□ -0.26
MKS1-209ENST00000580127 KLK5Q9Y337 293 aaPredicted RBP13.41□□□□□ -0.26
MKS1-209ENST00000580127 STARD9Q9P2P6 4700 aa13.41□□□□□ -0.26
MKS1-209ENST00000580127 IGKV1D-8A0A087WSZ0 117 aa13.4□□□□□ -0.26
MKS1-209ENST00000580127 TMEM213A2RRL7 107 aa13.4□□□□□ -0.26
MKS1-209ENST00000580127 UBE2CO00762 179 aa13.4□□□□□ -0.26
MKS1-209ENST00000580127 HLA-GP17693 338 aa13.4□□□□□ -0.26
MKS1-209ENST00000580127 BMI1P35226 326 aa13.4□□□□□ -0.26
MKS1-209ENST00000580127 GNG2P59768 71 aa13.4□□□□□ -0.26
MKS1-209ENST00000580127 RPL30P62888 115 aaKnown RBP13.4□□□□□ -0.26
MKS1-209ENST00000580127 ZNF585BQ52M93 769 aa13.4□□□□□ -0.26
MKS1-209ENST00000580127 LAMTOR1Q6IAA8 161 aa13.4□□□□□ -0.26
MKS1-209ENST00000580127 PLET1Q6UQ28 207 aa13.4□□□□□ -0.26
MKS1-209ENST00000580127 Q6ZWC4 215 aa13.4□□□□□ -0.26
MKS1-209ENST00000580127 OR2C3Q8N628 320 aa13.4□□□□□ -0.26
MKS1-209ENST00000580127 TMEM217Q8N7C4 229 aa13.4□□□□□ -0.26
MKS1-209ENST00000580127 CACNG8Q8WXS5 425 aa13.4□□□□□ -0.26
MKS1-209ENST00000580127 MLXQ9UH92 298 aa13.4□□□□□ -0.26
MKS1-209ENST00000580127 SPRY2O43597 315 aa13.39□□□□□ -0.27
MKS1-209ENST00000580127 AREGP15514 252 aa13.39□□□□□ -0.27
MKS1-209ENST00000580127 CTRB1P17538 263 aa13.39□□□□□ -0.27
MKS1-209ENST00000580127 KLK9Q2XQG4 91 aa13.39□□□□□ -0.27
MKS1-209ENST00000580127 CTRB2Q6GPI1 263 aa13.39□□□□□ -0.27
MKS1-209ENST00000580127 SSX9Q7RTT3 188 aa13.39□□□□□ -0.27
MKS1-209ENST00000580127 WFDC3Q8IUB2 231 aa13.39□□□□□ -0.27
MKS1-209ENST00000580127 ZBTB34Q8NCN2 500 aa13.39□□□□□ -0.27
MKS1-209ENST00000580127 CCDC140Q96MF4 163 aa13.39□□□□□ -0.27
MKS1-209ENST00000580127 COMMD5Q9GZQ3 224 aa13.39□□□□□ -0.27
MKS1-209ENST00000580127 TAS2R8Q9NYW2 309 aa13.39□□□□□ -0.27
MKS1-209ENST00000580127 ANXA10Q9UJ72 324 aa13.39□□□□□ -0.27
MKS1-209ENST00000580127 KLK9Q9UKQ9 250 aa13.39□□□□□ -0.27
MKS1-209ENST00000580127 S4R3C0 116 aa13.39□□□□□ -0.27
MKS1-209ENST00000580127 C8orf88P0DMB2 117 aa13.38□□□□□ -0.27
MKS1-209ENST00000580127 ARPC4P59998 168 aa13.38□□□□□ -0.27
MKS1-209ENST00000580127 TNFRSF9Q07011 255 aa13.38□□□□□ -0.27
MKS1-209ENST00000580127 MSMO1Q15800 293 aa13.38□□□□□ -0.27
MKS1-209ENST00000580127 TBCEQ15813 527 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms