RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 NEURL2Q9BR09 285 aa8.58□□□□□ -1.04
MSI2-209ENST00000579483 NAT8BQ9UHF3 227 aa8.58□□□□□ -1.04
MSI2-209ENST00000579483 LOC102723971A0A1B0GUV8 181 aa8.58□□□□□ -1.04
MSI2-209ENST00000579483 J3QLI3 93 aa8.58□□□□□ -1.04
MSI2-209ENST00000579483 WNT5AP41221 380 aa8.58□□□□□ -1.04
MSI2-209ENST00000579483 GATAD1Q8WUU5 269 aa8.58□□□□□ -1.04
MSI2-209ENST00000579483 GPR146Q96CH1 333 aa8.58□□□□□ -1.04
MSI2-209ENST00000579483 GPR82Q96P67 336 aa8.58□□□□□ -1.04
MSI2-209ENST00000579483 PIN1P1O15428 100 aa8.57□□□□□ -1.04
MSI2-209ENST00000579483 MGPP08493 103 aa8.57□□□□□ -1.04
MSI2-209ENST00000579483 SELENOHQ8IZQ5 122 aaKnown RBP8.57□□□□□ -1.04
MSI2-209ENST00000579483 TEX45Q8NA69 505 aa8.57□□□□□ -1.04
MSI2-209ENST00000579483 OR10G8Q8NGN5 311 aa8.57□□□□□ -1.04
MSI2-209ENST00000579483 ANAPC16Q96DE5 110 aa8.57□□□□□ -1.04
MSI2-209ENST00000579483 NXF2Q9GZY0 626 aaKnown RBP8.57□□□□□ -1.04
MSI2-209ENST00000579483 TTC28Q96AY4 2481 aa8.57□□□□□ -1.04
MSI2-209ENST00000579483 RBFOX3A6NFN3 312 aa8.57□□□□□ -1.04
MSI2-209ENST00000579483 LYNX1G3V0Z9 82 aa8.57□□□□□ -1.04
MSI2-209ENST00000579483 LYNX1P0DP58 116 aa8.57□□□□□ -1.04
MSI2-209ENST00000579483 ZNF474Q6S9Z5 364 aaPredicted RBP8.57□□□□□ -1.04
MSI2-209ENST00000579483 RNASEH2CQ8TDP1 164 aaKnown RBP8.57□□□□□ -1.04
MSI2-209ENST00000579483 SMIM8Q96KF7 97 aa8.57□□□□□ -1.04
MSI2-209ENST00000579483 GGACTQ9BVM4 153 aa8.57□□□□□ -1.04
MSI2-209ENST00000579483 BOLA1Q9Y3E2 137 aa8.57□□□□□ -1.04
MSI2-209ENST00000579483 KLF2Q9Y5W3 355 aaPredicted RBP8.57□□□□□ -1.04
MSI2-209ENST00000579483 RALGAPA1Q6GYQ0 2036 aa8.57□□□□□ -1.04
MSI2-209ENST00000579483 A0A1B0GTI1 187 aa8.57□□□□□ -1.04
MSI2-209ENST00000579483 OR4C46A6NHA9 309 aa8.57□□□□□ -1.04
MSI2-209ENST00000579483 UBE2L6O14933 153 aa8.57□□□□□ -1.04
MSI2-209ENST00000579483 C8orf88P0DMB2 117 aa8.57□□□□□ -1.04
MSI2-209ENST00000579483 HKR1P10072 659 aa8.57□□□□□ -1.04
MSI2-209ENST00000579483 B3GALT5-AS1P59052 145 aa8.57□□□□□ -1.04
MSI2-209ENST00000579483 RND3P61587 244 aa8.57□□□□□ -1.04
MSI2-209ENST00000579483 MOGAT2Q3SYC2 334 aa8.57□□□□□ -1.04
MSI2-209ENST00000579483 OR5AU1Q8NGC0 362 aa8.57□□□□□ -1.04
MSI2-209ENST00000579483 GPX1P07203 203 aa8.57□□□□□ -1.04
MSI2-209ENST00000579483 Q6ZN92 141 aa8.57□□□□□ -1.04
MSI2-209ENST00000579483 TMEM252Q8N6L7 170 aa8.57□□□□□ -1.04
MSI2-209ENST00000579483 CACNG8Q8WXS5 425 aa8.57□□□□□ -1.04
MSI2-209ENST00000579483 MRPL20Q9BYC9 149 aaKnown RBP8.57□□□□□ -1.04
MSI2-209ENST00000579483 A0A1W2PRX2 142 aa8.56□□□□□ -1.04
MSI2-209ENST00000579483 SRSF10O75494 262 aaKnown RBP8.56□□□□□ -1.04
MSI2-209ENST00000579483 IL4P05112 153 aa8.56□□□□□ -1.04
MSI2-209ENST00000579483 CCL3L1P16619 93 aa8.56□□□□□ -1.04
MSI2-209ENST00000579483 RPL39P5Q59GN2 51 aa8.56□□□□□ -1.04
MSI2-209ENST00000579483 AMMECR1LQ6DCA0 310 aa8.56□□□□□ -1.04
MSI2-209ENST00000579483 MESP1Q9BRJ9 268 aa8.56□□□□□ -1.04
MSI2-209ENST00000579483 PRO3102Q9H379 93 aa8.56□□□□□ -1.04
MSI2-209ENST00000579483 PSMB11A5LHX3 300 aa8.56□□□□□ -1.04
MSI2-209ENST00000579483 TMEM189A5PLL7 270 aa8.56□□□□□ -1.04
MSI2-209ENST00000579483 F12P00748 615 aaPredicted RBP8.56□□□□□ -1.04
MSI2-209ENST00000579483 RELBQ01201 579 aa8.56□□□□□ -1.04
MSI2-209ENST00000579483 H1FOOQ8IZA3 346 aaPredicted RBP8.56□□□□□ -1.04
MSI2-209ENST00000579483 RBFOX2O43251 390 aaKnown RBP eCLIP8.56□□□□□ -1.04
MSI2-209ENST00000579483 HERVK_113P61574 105 aa8.56□□□□□ -1.04
MSI2-209ENST00000579483 BSXQ3C1V8 233 aa8.56□□□□□ -1.04
MSI2-209ENST00000579483 EAF1Q96JC9 268 aaPredicted RBP8.56□□□□□ -1.04
MSI2-209ENST00000579483 RTN4RQ9BZR6 473 aa8.56□□□□□ -1.04
MSI2-209ENST00000579483 SIP14410 1827 aa8.56□□□□□ -1.04
MSI2-209ENST00000579483 DPRXA6NFQ7 191 aa8.56□□□□□ -1.04
MSI2-209ENST00000579483 EFNA2O43921 213 aa8.56□□□□□ -1.04
MSI2-209ENST00000579483 ADAM11O75078 769 aa8.56□□□□□ -1.04
MSI2-209ENST00000579483 MSMBP08118 114 aa8.56□□□□□ -1.04
MSI2-209ENST00000579483 AREGP15514 252 aa8.56□□□□□ -1.04
MSI2-209ENST00000579483 CRISP2P16562 243 aa8.56□□□□□ -1.04
MSI2-209ENST00000579483 TMPRSS5Q9H3S3 457 aa8.56□□□□□ -1.04
MSI2-209ENST00000579483 PLXNA3P51805 1871 aa8.55□□□□□ -1.04
MSI2-209ENST00000579483 FGF8P55075 233 aaPredicted RBP8.55□□□□□ -1.04
MSI2-209ENST00000579483 SUMO1P63165 101 aaKnown RBP8.55□□□□□ -1.04
MSI2-209ENST00000579483 PRR30Q53SZ7 412 aaPredicted RBP8.55□□□□□ -1.04
MSI2-209ENST00000579483 HEPN1Q6WQI6 88 aa8.55□□□□□ -1.04
MSI2-209ENST00000579483 PRNTQ86SH4 94 aa8.55□□□□□ -1.04
MSI2-209ENST00000579483 ZCCHC24Q8N2G6 241 aaKnown RBP8.55□□□□□ -1.04
MSI2-209ENST00000579483 PRR13Q9NZ81 148 aa8.55□□□□□ -1.04
MSI2-209ENST00000579483 FBLN5Q9UBX5 448 aa8.55□□□□□ -1.04
MSI2-209ENST00000579483 TRAPPC1Q9Y5R8 145 aa8.55□□□□□ -1.04
MSI2-209ENST00000579483 A0A0B4J293 547 aa8.55□□□□□ -1.04
MSI2-209ENST00000579483 A8MWL6 223 aa8.55□□□□□ -1.04
MSI2-209ENST00000579483 B4DEV8 164 aa8.55□□□□□ -1.04
MSI2-209ENST00000579483 CLPSP04118 112 aa8.55□□□□□ -1.04
MSI2-209ENST00000579483 ZNF250P15622 560 aa8.55□□□□□ -1.04
MSI2-209ENST00000579483 ZNF345Q14585 488 aa8.55□□□□□ -1.04
MSI2-209ENST00000579483 SAPCD1Q5SSQ6 148 aa8.55□□□□□ -1.04
MSI2-209ENST00000579483 TMEM116Q8NCL8 245 aa8.55□□□□□ -1.04
MSI2-209ENST00000579483 CLDND2Q8NHS1 167 aa8.55□□□□□ -1.04
MSI2-209ENST00000579483 NPIPB3Q92617 1050 aa8.55□□□□□ -1.04
MSI2-209ENST00000579483 FAM210BQ96KR6 192 aa8.55□□□□□ -1.04
MSI2-209ENST00000579483 SMDT1Q9H4I9 107 aa8.55□□□□□ -1.04
MSI2-209ENST00000579483 TICRRQ7Z2Z1 1910 aa8.55□□□□□ -1.04
MSI2-209ENST00000579483 ISLRO14498 428 aa8.55□□□□□ -1.04
MSI2-209ENST00000579483 ZNF818PQ6ZRF7 136 aa8.55□□□□□ -1.04
MSI2-209ENST00000579483 FBLL1A6NHQ2 334 aaKnown RBP8.55□□□□□ -1.04
MSI2-209ENST00000579483 DUSP14O95147 198 aaKnown RBP8.55□□□□□ -1.04
MSI2-209ENST00000579483 TDGF1P13385 188 aa8.55□□□□□ -1.04
MSI2-209ENST00000579483 ZP1P60852 638 aa8.55□□□□□ -1.04
MSI2-209ENST00000579483 FAM159AQ6UWV7 190 aa8.55□□□□□ -1.04
MSI2-209ENST00000579483 CD74P04233 296 aa8.54□□□□□ -1.04
MSI2-209ENST00000579483 SFTA3P0C7M3 94 aa8.54□□□□□ -1.04
MSI2-209ENST00000579483 OR9G9P0C7N8 305 aa8.54□□□□□ -1.04
MSI2-209ENST00000579483 VMO1Q7Z5L0 202 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms