RNA–Protein interactions for RNA: ENST00000579280.1

ATG13-225, Transcript of autophagy related 13, human

TSL 5

Gene ATG13, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATG13-225	ENST00000579280	RAMP3	O60896	148 aa		13.61	□□□□□ -0.23
ATG13-225	ENST00000579280	TRGV3	P03979	118 aa		13.61	□□□□□ -0.23
ATG13-225	ENST00000579280	NQO2	P16083	231 aa		13.61	□□□□□ -0.23
ATG13-225	ENST00000579280	F2R	P25116	425 aa		13.61	□□□□□ -0.23
ATG13-225	ENST00000579280	RAB25	P57735	213 aa		13.61	□□□□□ -0.23
ATG13-225	ENST00000579280	MRGPRG-AS1	Q2M3A8	158 aa		13.61	□□□□□ -0.23
ATG13-225	ENST00000579280	DEFB136	Q30KP8	78 aa		13.61	□□□□□ -0.23
ATG13-225	ENST00000579280	KPRP	Q5T749	579 aa	Predicted RBP	13.61	□□□□□ -0.23
ATG13-225	ENST00000579280	SSX9	Q7RTT3	188 aa		13.61	□□□□□ -0.23
ATG13-225	ENST00000579280	SLC38A6	Q8IZM9	456 aa		13.61	□□□□□ -0.23
ATG13-225	ENST00000579280	ARRDC1	Q8N5I2	433 aa		13.61	□□□□□ -0.23
ATG13-225	ENST00000579280	TMEM229B	Q8NBD8	167 aa		13.61	□□□□□ -0.23
ATG13-225	ENST00000579280	OR5T1	Q8NG75	326 aa		13.61	□□□□□ -0.23
ATG13-225	ENST00000579280	OR11H1	Q8NG94	326 aa		13.61	□□□□□ -0.23
ATG13-225	ENST00000579280	DPF1	Q92782	380 aa		13.61	□□□□□ -0.23
ATG13-225	ENST00000579280	MS4A10	Q96PG2	267 aa		13.61	□□□□□ -0.23
ATG13-225	ENST00000579280	GNB4	Q9HAV0	340 aa		13.61	□□□□□ -0.23
ATG13-225	ENST00000579280	PLEKHA2	Q9HB19	425 aa		13.61	□□□□□ -0.23
ATG13-225	ENST00000579280	BET1L	Q9NYM9	111 aa		13.61	□□□□□ -0.23
ATG13-225	ENST00000579280	RSL24D1	Q9UHA3	163 aa	Known RBP	13.61	□□□□□ -0.23
ATG13-225	ENST00000579280		I3L521	148 aa		13.6	□□□□□ -0.23
ATG13-225	ENST00000579280	ZNF701	M0R085	212 aa	Predicted RBP	13.6	□□□□□ -0.23
ATG13-225	ENST00000579280	BRI3	O95415	125 aa		13.6	□□□□□ -0.23
ATG13-225	ENST00000579280	CD3D	P04234	171 aa		13.6	□□□□□ -0.23
ATG13-225	ENST00000579280	RLN1	P04808	185 aa		13.6	□□□□□ -0.23
ATG13-225	ENST00000579280	OR1N2	Q8NGR9	330 aa		13.6	□□□□□ -0.23
ATG13-225	ENST00000579280	CASTOR1	Q8WTX7	329 aa		13.6	□□□□□ -0.23
ATG13-225	ENST00000579280	DGCR14	Q96DF8	476 aa	Known RBP	13.6	□□□□□ -0.23
ATG13-225	ENST00000579280	DUX3	Q96PT4	197 aa		13.6	□□□□□ -0.23
ATG13-225	ENST00000579280	OR5B12	Q96R08	314 aa		13.6	□□□□□ -0.23
ATG13-225	ENST00000579280	RSRP1	Q9BUV0	290 aa		13.6	□□□□□ -0.23
ATG13-225	ENST00000579280	NXF2	Q9GZY0	626 aa	Known RBP	13.6	□□□□□ -0.23
ATG13-225	ENST00000579280	COMMD9	Q9P000	198 aa		13.6	□□□□□ -0.23
ATG13-225	ENST00000579280		A0A0G2JLM5	398 aa		13.59	□□□□□ -0.23
ATG13-225	ENST00000579280	OR8U8	P0C7N1	319 aa		13.59	□□□□□ -0.23
ATG13-225	ENST00000579280	ERVK-16	P61578	105 aa		13.59	□□□□□ -0.23
ATG13-225	ENST00000579280	DGCR2	P98153	550 aa		13.59	□□□□□ -0.23
ATG13-225	ENST00000579280	ZNF616	Q08AN1	781 aa		13.59	□□□□□ -0.23
ATG13-225	ENST00000579280	POU2AF1	Q16633	256 aa		13.59	□□□□□ -0.23
ATG13-225	ENST00000579280	PHLDA2	Q53GA4	152 aa		13.59	□□□□□ -0.23
ATG13-225	ENST00000579280	OR4A47	Q6IF82	309 aa		13.59	□□□□□ -0.23
ATG13-225	ENST00000579280	SLC25A42	Q86VD7	318 aa		13.59	□□□□□ -0.23
ATG13-225	ENST00000579280	DMBX1	Q8NFW5	382 aa		13.59	□□□□□ -0.23
ATG13-225	ENST00000579280	SMIM4	Q8WVI0	70 aa		13.59	□□□□□ -0.23
ATG13-225	ENST00000579280	TINAGL1	Q9GZM7	467 aa	Predicted RBP	13.59	□□□□□ -0.23
ATG13-225	ENST00000579280	HRASLS	Q9HDD0	168 aa		13.59	□□□□□ -0.23
ATG13-225	ENST00000579280	COA4	Q9NYJ1	87 aa		13.59	□□□□□ -0.23
ATG13-225	ENST00000579280	NOTCH3	Q9UM47	2321 aa		13.59	□□□□□ -0.23
ATG13-225	ENST00000579280	C13orf42	A0A1B0GVH6	325 aa		13.58	□□□□□ -0.24
ATG13-225	ENST00000579280	FABP12	A6NFH5	140 aa		13.58	□□□□□ -0.24
ATG13-225	ENST00000579280	RAB3D	O95716	219 aa		13.58	□□□□□ -0.24
ATG13-225	ENST00000579280	CD74	P04233	296 aa		13.58	□□□□□ -0.24
ATG13-225	ENST00000579280	LGALS1	P09382	135 aa	Known RBP	13.58	□□□□□ -0.24
ATG13-225	ENST00000579280	OR9G9	P0C7N8	305 aa		13.58	□□□□□ -0.24
ATG13-225	ENST00000579280	RPL27A	P46776	148 aa	Known RBP	13.58	□□□□□ -0.24
ATG13-225	ENST00000579280	RPL8	P62917	257 aa	Known RBP	13.58	□□□□□ -0.24
ATG13-225	ENST00000579280	FHL3	Q13643	280 aa		13.58	□□□□□ -0.24
ATG13-225	ENST00000579280	MEF2D	Q14814	521 aa		13.58	□□□□□ -0.24
ATG13-225	ENST00000579280	ASPHD1	Q5U4P2	390 aa		13.58	□□□□□ -0.24
ATG13-225	ENST00000579280	STEAP1B	Q6NZ63	245 aa		13.58	□□□□□ -0.24
ATG13-225	ENST00000579280	REC114	Q7Z4M0	266 aa		13.58	□□□□□ -0.24
ATG13-225	ENST00000579280	ZNF486	Q96H40	463 aa	Predicted RBP	13.58	□□□□□ -0.24
ATG13-225	ENST00000579280	FAM212B	Q9NTI7	297 aa	Predicted RBP	13.58	□□□□□ -0.24
ATG13-225	ENST00000579280	TNC	P24821	2201 aa		13.58	□□□□□ -0.24
ATG13-225	ENST00000579280	S1PR2	O95136	353 aa		13.57	□□□□□ -0.24
ATG13-225	ENST00000579280	APELA	P0DMC3	54 aa		13.57	□□□□□ -0.24
ATG13-225	ENST00000579280	PGAM2	P15259	253 aa		13.57	□□□□□ -0.24
ATG13-225	ENST00000579280	HLA-G	P17693	338 aa		13.57	□□□□□ -0.24
ATG13-225	ENST00000579280	TNFSF8	P32971	234 aa		13.57	□□□□□ -0.24
ATG13-225	ENST00000579280	S100A5	P33763	92 aa		13.57	□□□□□ -0.24
ATG13-225	ENST00000579280	LHFPL1	Q86WI0	220 aa		13.57	□□□□□ -0.24
ATG13-225	ENST00000579280	RBM38	Q9H0Z9	239 aa	Known RBP	13.57	□□□□□ -0.24
ATG13-225	ENST00000579280	DPPA5	A6NC42	116 aa		13.56	□□□□□ -0.24
ATG13-225	ENST00000579280	DISC1	C4P0D8	188 aa		13.56	□□□□□ -0.24
ATG13-225	ENST00000579280	LINC01619	G3V211	115 aa		13.56	□□□□□ -0.24
ATG13-225	ENST00000579280	UPK2	O00526	184 aa		13.56	□□□□□ -0.24
ATG13-225	ENST00000579280	IGHV3-11	P01762	117 aa		13.56	□□□□□ -0.24
ATG13-225	ENST00000579280	HSPB1	P04792	205 aa	Known RBP	13.56	□□□□□ -0.24
ATG13-225	ENST00000579280	FGF2	P09038	288 aa		13.56	□□□□□ -0.24
ATG13-225	ENST00000579280	ECI1	P42126	302 aa		13.56	□□□□□ -0.24
ATG13-225	ENST00000579280	LPAR6	P43657	344 aa		13.56	□□□□□ -0.24
ATG13-225	ENST00000579280	PDLIM3	Q53GG5	364 aa	Predicted RBP	13.56	□□□□□ -0.24
ATG13-225	ENST00000579280	C10orf55	Q5SWW7	151 aa		13.56	□□□□□ -0.24
ATG13-225	ENST00000579280	FOXB2	Q5VYV0	432 aa		13.56	□□□□□ -0.24
ATG13-225	ENST00000579280	TBC1D26	Q86UD7	250 aa		13.56	□□□□□ -0.24
ATG13-225	ENST00000579280	TTC9C	Q8N5M4	171 aa		13.56	□□□□□ -0.24
ATG13-225	ENST00000579280	ADAD2	Q8NCV1	583 aa	Known RBP	13.56	□□□□□ -0.24
ATG13-225	ENST00000579280	TERB2	Q8NHR7	220 aa		13.56	□□□□□ -0.24
ATG13-225	ENST00000579280	ZFAND1	Q8TCF1	268 aa		13.56	□□□□□ -0.24
ATG13-225	ENST00000579280	USMG5	Q96IX5	58 aa		13.56	□□□□□ -0.24
ATG13-225	ENST00000579280	FYTTD1	Q96QD9	318 aa	Known RBP	13.56	□□□□□ -0.24
ATG13-225	ENST00000579280	TMEM140	Q9NV12	185 aa		13.56	□□□□□ -0.24
ATG13-225	ENST00000579280	ZMAT5	Q9UDW3	170 aa	Known RBP	13.56	□□□□□ -0.24
ATG13-225	ENST00000579280	NOTCH1	P46531	2555 aa		13.56	□□□□□ -0.24
ATG13-225	ENST00000579280	GSTZ1	O43708	216 aa	Predicted RBP	13.55	□□□□□ -0.24
ATG13-225	ENST00000579280	ZNF735	P0CB33	412 aa		13.55	□□□□□ -0.24
ATG13-225	ENST00000579280	AKAIN1	P0CW23	69 aa		13.55	□□□□□ -0.24
ATG13-225	ENST00000579280	RND3	P61587	244 aa		13.55	□□□□□ -0.24
ATG13-225	ENST00000579280	SCGB2B2	Q4G0G5	96 aa		13.55	□□□□□ -0.24
ATG13-225	ENST00000579280	CADM3	Q8N126	398 aa		13.55	□□□□□ -0.24

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