RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 PMP2P02689 132 aa11.44□□□□□ -0.58
SS18-212ENST00000579061 RCVRNP35243 200 aa11.44□□□□□ -0.58
SS18-212ENST00000579061 SLURP1P55000 103 aa11.44□□□□□ -0.58
SS18-212ENST00000579061 TAS2R31P59538 309 aa11.44□□□□□ -0.58
SS18-212ENST00000579061 POU2AF1Q16633 256 aa11.44□□□□□ -0.58
SS18-212ENST00000579061 ZNF429Q86V71 674 aa11.44□□□□□ -0.58
SS18-212ENST00000579061 SLC25A42Q86VD7 318 aa11.44□□□□□ -0.58
SS18-212ENST00000579061 VKORC1L1Q8N0U8 176 aa11.44□□□□□ -0.58
SS18-212ENST00000579061 SPAG16Q8N0X2 631 aa11.44□□□□□ -0.58
SS18-212ENST00000579061 TTC9CQ8N5M4 171 aa11.44□□□□□ -0.58
SS18-212ENST00000579061 OR6F1Q8NGZ6 308 aa11.44□□□□□ -0.58
SS18-212ENST00000579061 OR4A5Q8NH83 315 aa11.44□□□□□ -0.58
SS18-212ENST00000579061 GPHA2Q96T91 129 aa11.44□□□□□ -0.58
SS18-212ENST00000579061 FAM25AB3EWG3 89 aa11.43□□□□□ -0.58
SS18-212ENST00000579061 FAM25CB3EWG5 89 aa11.43□□□□□ -0.58
SS18-212ENST00000579061 FAM25GB3EWG6 89 aa11.43□□□□□ -0.58
SS18-212ENST00000579061 ZP3P21754 424 aa11.43□□□□□ -0.58
SS18-212ENST00000579061 HRH1P35367 487 aa11.43□□□□□ -0.58
SS18-212ENST00000579061 ZNF343Q6P1L6 599 aa11.43□□□□□ -0.58
SS18-212ENST00000579061 SNX29P2Q8IUI4 249 aa11.43□□□□□ -0.58
SS18-212ENST00000579061 C15orf40Q8WUR7 153 aa11.43□□□□□ -0.58
SS18-212ENST00000579061 BCL7BQ9BQE9 202 aa11.43□□□□□ -0.58
SS18-212ENST00000579061 PLEKHA2Q9HB19 425 aa11.43□□□□□ -0.58
SS18-212ENST00000579061 TRBV9A0A0B4J1U6 114 aa11.42□□□□□ -0.58
SS18-212ENST00000579061 FAM223BA6NKX1 122 aa11.42□□□□□ -0.58
SS18-212ENST00000579061 FGF2P09038 288 aa11.42□□□□□ -0.58
SS18-212ENST00000579061 APELAP0DMC3 54 aa11.42□□□□□ -0.58
SS18-212ENST00000579061 NQO2P16083 231 aa11.42□□□□□ -0.58
SS18-212ENST00000579061 HLA-DMAP28067 261 aa11.42□□□□□ -0.58
SS18-212ENST00000579061 RPL27AP46776 148 aaKnown RBP11.42□□□□□ -0.58
SS18-212ENST00000579061 RPL8P62917 257 aaKnown RBP11.42□□□□□ -0.58
SS18-212ENST00000579061 DEFB121Q5J5C9 76 aa11.42□□□□□ -0.58
SS18-212ENST00000579061 C10orf55Q5SWW7 151 aa11.42□□□□□ -0.58
SS18-212ENST00000579061 AADACL3Q5VUY0 350 aa11.42□□□□□ -0.58
SS18-212ENST00000579061 LPCAT3Q6P1A2 487 aa11.42□□□□□ -0.58
SS18-212ENST00000579061 ACSM6Q6P461 480 aa11.42□□□□□ -0.58
SS18-212ENST00000579061 FAM223AQ8IWN6 122 aa11.42□□□□□ -0.58
SS18-212ENST00000579061 CMTM1Q8IZ96 169 aa11.42□□□□□ -0.58
SS18-212ENST00000579061 COMMD9Q9P000 198 aa11.42□□□□□ -0.58
SS18-212ENST00000579061 ZNF257Q9Y2Q1 563 aa11.42□□□□□ -0.58
SS18-212ENST00000579061 NPIPB5A8MRT5 1133 aa11.41□□□□□ -0.58
SS18-212ENST00000579061 TEX22C9J3V5 150 aa11.41□□□□□ -0.58
SS18-212ENST00000579061 GPR31O00270 319 aa11.41□□□□□ -0.58
SS18-212ENST00000579061 PGLYRP1O75594 196 aaPredicted RBP11.41□□□□□ -0.58
SS18-212ENST00000579061 IL6RP08887 468 aaPredicted RBP11.41□□□□□ -0.58
SS18-212ENST00000579061 ZNF735P0CB33 412 aa11.41□□□□□ -0.58
SS18-212ENST00000579061 F2RP25116 425 aa11.41□□□□□ -0.58
SS18-212ENST00000579061 ECI1P42126 302 aa11.41□□□□□ -0.58
SS18-212ENST00000579061 TSPAN5P62079 268 aa11.41□□□□□ -0.58
SS18-212ENST00000579061 FAM209BQ5JX69 171 aa11.41□□□□□ -0.58
SS18-212ENST00000579061 OR4A47Q6IF82 309 aa11.41□□□□□ -0.58
SS18-212ENST00000579061 SSX9Q7RTT3 188 aa11.41□□□□□ -0.58
SS18-212ENST00000579061 CADM3Q8N126 398 aa11.41□□□□□ -0.58
SS18-212ENST00000579061 OR51H1Q8NH63 302 aa11.41□□□□□ -0.58
SS18-212ENST00000579061 RAB2BQ8WUD1 216 aa11.41□□□□□ -0.58
SS18-212ENST00000579061 FXYD6Q9H0Q3 95 aa11.41□□□□□ -0.58
SS18-212ENST00000579061 SLC2A9Q9NRM0 540 aa11.41□□□□□ -0.58
SS18-212ENST00000579061 FAM212BQ9NTI7 297 aaPredicted RBP11.41□□□□□ -0.58
SS18-212ENST00000579061 PEF1Q9UBV8 284 aaKnown RBP11.41□□□□□ -0.58
SS18-212ENST00000579061 ZNF256Q9Y2P7 627 aaPredicted RBP11.41□□□□□ -0.58
SS18-212ENST00000579061 E7EUB6 86 aa11.4□□□□□ -0.58
SS18-212ENST00000579061 SAP30O75446 220 aa11.4□□□□□ -0.58
SS18-212ENST00000579061 HLA-GP17693 338 aa11.4□□□□□ -0.58
SS18-212ENST00000579061 S100GP29377 79 aa11.4□□□□□ -0.58
SS18-212ENST00000579061 TMBIM6P55061 237 aa11.4□□□□□ -0.58
SS18-212ENST00000579061 UCP3P55916 312 aa11.4□□□□□ -0.58
SS18-212ENST00000579061 RHOGP84095 191 aa11.4□□□□□ -0.58
SS18-212ENST00000579061 SPCS2Q15005 226 aa11.4□□□□□ -0.58
SS18-212ENST00000579061 KLK9Q2XQG4 91 aa11.4□□□□□ -0.58
SS18-212ENST00000579061 VAX1Q5SQQ9 334 aa11.4□□□□□ -0.58
SS18-212ENST00000579061 CLVS1Q8IUQ0 354 aaPredicted RBP11.4□□□□□ -0.58
SS18-212ENST00000579061 ELOVL1Q9BW60 279 aa11.4□□□□□ -0.58
SS18-212ENST00000579061 HRASLSQ9HDD0 168 aa11.4□□□□□ -0.58
SS18-212ENST00000579061 AKIP1Q9NQ31 210 aa11.4□□□□□ -0.58
SS18-212ENST00000579061 EXTL2Q9UBQ6 330 aa11.4□□□□□ -0.58
SS18-212ENST00000579061 KLK9Q9UKQ9 250 aa11.4□□□□□ -0.58
SS18-212ENST00000579061 ANKRD34BA5PLL1 514 aa11.39□□□□□ -0.59
SS18-212ENST00000579061 DPPA5A6NC42 116 aa11.39□□□□□ -0.59
SS18-212ENST00000579061 HMX3A6NHT5 357 aa11.39□□□□□ -0.59
SS18-212ENST00000579061 UPK2O00526 184 aa11.39□□□□□ -0.59
SS18-212ENST00000579061 RBMXL2O75526 392 aaKnown RBP11.39□□□□□ -0.59
SS18-212ENST00000579061 RLN1P04808 185 aa11.39□□□□□ -0.59
SS18-212ENST00000579061 CRYGCP07315 174 aa11.39□□□□□ -0.59
SS18-212ENST00000579061 TBPP20226 339 aa11.39□□□□□ -0.59
SS18-212ENST00000579061 RPL5P46777 297 aaKnown RBP11.39□□□□□ -0.59
SS18-212ENST00000579061 ZNF45Q02386 682 aa11.39□□□□□ -0.59
SS18-212ENST00000579061 ATP5G2Q06055 141 aa11.39□□□□□ -0.59
SS18-212ENST00000579061 KLF5Q13887 457 aaPredicted RBP11.39□□□□□ -0.59
SS18-212ENST00000579061 NECAP1Q8NC96 275 aa11.39□□□□□ -0.59
SS18-212ENST00000579061 DMBX1Q8NFW5 382 aa11.39□□□□□ -0.59
SS18-212ENST00000579061 OR6Q1Q8NGQ2 317 aa11.39□□□□□ -0.59
SS18-212ENST00000579061 DGCR14Q96DF8 476 aaKnown RBP11.39□□□□□ -0.59
SS18-212ENST00000579061 FYTTD1Q96QD9 318 aaKnown RBP11.39□□□□□ -0.59
SS18-212ENST00000579061 OR4C12Q96R67 309 aa11.39□□□□□ -0.59
SS18-212ENST00000579061 SRSF8Q9BRL6 282 aaKnown RBP11.39□□□□□ -0.59
SS18-212ENST00000579061 RSRP1Q9BUV0 290 aa11.39□□□□□ -0.59
SS18-212ENST00000579061 MTFP1Q9UDX5 166 aa11.39□□□□□ -0.59
SS18-212ENST00000579061 LSM4Q9Y4Z0 139 aaKnown RBP11.39□□□□□ -0.59
SS18-212ENST00000579061 A0A1B0GW64 132 aa11.38□□□□□ -0.59
SS18-212ENST00000579061 S1PR2O95136 353 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms