RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 AURKAIP1Q9NWT8 199 aaPredicted RBP11.85□□□□□ -0.51
SMG6-220ENST00000576218 CCDC59Q9P031 241 aaKnown RBP11.85□□□□□ -0.51
SMG6-220ENST00000576218 M0QYG6 137 aa11.84□□□□□ -0.51
SMG6-220ENST00000576218 GPR31O00270 319 aa11.84□□□□□ -0.51
SMG6-220ENST00000576218 RAMP3O60896 148 aa11.84□□□□□ -0.51
SMG6-220ENST00000576218 HPRT1P00492 218 aa11.84□□□□□ -0.51
SMG6-220ENST00000576218 NQO2P16083 231 aa11.84□□□□□ -0.51
SMG6-220ENST00000576218 GNRHRP30968 328 aa11.84□□□□□ -0.51
SMG6-220ENST00000576218 RPL27AP46776 148 aaKnown RBP11.84□□□□□ -0.51
SMG6-220ENST00000576218 RUNX1Q01196 453 aa11.84□□□□□ -0.51
SMG6-220ENST00000576218 IL18Q14116 193 aa11.84□□□□□ -0.51
SMG6-220ENST00000576218 C9orf66Q5T8R8 295 aa11.84□□□□□ -0.51
SMG6-220ENST00000576218 LYSMD2Q8IV50 215 aa11.84□□□□□ -0.51
SMG6-220ENST00000576218 ISOC1Q96CN7 298 aa11.84□□□□□ -0.51
SMG6-220ENST00000576218 CMYA5Q8N3K9 4069 aa11.84□□□□□ -0.51
SMG6-220ENST00000576218 RBFOX2O43251 390 aaKnown RBP eCLIP11.83□□□□□ -0.522e-6■■■■□ 23.3
SMG6-220ENST00000576218 OR9G9P0C7N8 305 aa11.83□□□□□ -0.52
SMG6-220ENST00000576218 PGAM2P15259 253 aa11.83□□□□□ -0.52
SMG6-220ENST00000576218 MAS1LP35410 378 aa11.83□□□□□ -0.52
SMG6-220ENST00000576218 TAS2R31P59538 309 aa11.83□□□□□ -0.52
SMG6-220ENST00000576218 RPL8P62917 257 aaKnown RBP11.83□□□□□ -0.52
SMG6-220ENST00000576218 SSBP2P81877 361 aaPredicted RBP11.83□□□□□ -0.52
SMG6-220ENST00000576218 FHL3Q13643 280 aa11.83□□□□□ -0.52
SMG6-220ENST00000576218 KIAA0141Q14154 515 aaPredicted RBP11.83□□□□□ -0.52
SMG6-220ENST00000576218 PHLDA2Q53GA4 152 aa11.83□□□□□ -0.52
SMG6-220ENST00000576218 C10orf55Q5SWW7 151 aa11.83□□□□□ -0.52
SMG6-220ENST00000576218 SLC25A42Q86VD7 318 aa11.83□□□□□ -0.52
SMG6-220ENST00000576218 OR52I2Q8NH67 350 aa11.83□□□□□ -0.52
SMG6-220ENST00000576218 OR4A5Q8NH83 315 aa11.83□□□□□ -0.52
SMG6-220ENST00000576218 TMEM167AQ8TBQ9 72 aa11.83□□□□□ -0.52
SMG6-220ENST00000576218 DIRAS2Q96HU8 199 aa11.83□□□□□ -0.52
SMG6-220ENST00000576218 IGHV4OR15-8A0A075B7B6 117 aa11.82□□□□□ -0.52
SMG6-220ENST00000576218 A0A087WW49 117 aa11.82□□□□□ -0.52
SMG6-220ENST00000576218 ANKRD34BA5PLL1 514 aa11.82□□□□□ -0.52
SMG6-220ENST00000576218 H3BMQ9 156 aa11.82□□□□□ -0.52
SMG6-220ENST00000576218 CTDSP2O14595 271 aa11.82□□□□□ -0.52
SMG6-220ENST00000576218 OVOL1O14753 267 aa11.82□□□□□ -0.52
SMG6-220ENST00000576218 PGLYRP1O75594 196 aaPredicted RBP11.82□□□□□ -0.52
SMG6-220ENST00000576218 TPPPO94811 219 aa11.82□□□□□ -0.52
SMG6-220ENST00000576218 S1PR2O95136 353 aa11.82□□□□□ -0.52
SMG6-220ENST00000576218 HSPB1P04792 205 aaKnown RBP11.82□□□□□ -0.52
SMG6-220ENST00000576218 RPA2P15927 270 aa11.82□□□□□ -0.52
SMG6-220ENST00000576218 SLURP1P55000 103 aa11.82□□□□□ -0.52
SMG6-220ENST00000576218 DEFA5Q01523 94 aa11.82□□□□□ -0.52
SMG6-220ENST00000576218 ASPHD1Q5U4P2 390 aa11.82□□□□□ -0.52
SMG6-220ENST00000576218 OR4A47Q6IF82 309 aa11.82□□□□□ -0.52
SMG6-220ENST00000576218 SLC38A6Q8IZM9 456 aa11.82□□□□□ -0.52
SMG6-220ENST00000576218 PUSL1Q8N0Z8 303 aaKnown RBP11.82□□□□□ -0.52
SMG6-220ENST00000576218 DYNC2LI1Q8TCX1 351 aa11.82□□□□□ -0.52
SMG6-220ENST00000576218 TINAGL1Q9GZM7 467 aaPredicted RBP11.82□□□□□ -0.52
SMG6-220ENST00000576218 COMMD5Q9GZQ3 224 aa11.82□□□□□ -0.52
SMG6-220ENST00000576218 COMMD9Q9P000 198 aa11.82□□□□□ -0.52
SMG6-220ENST00000576218 KLK11Q9UBX7 282 aa11.82□□□□□ -0.52
SMG6-220ENST00000576218 SAP30O75446 220 aa11.81□□□□□ -0.52
SMG6-220ENST00000576218 DHFRP00374 187 aa11.81□□□□□ -0.52
SMG6-220ENST00000576218 HLA-GP17693 338 aa11.81□□□□□ -0.52
SMG6-220ENST00000576218 TBPP20226 339 aa11.81□□□□□ -0.52
SMG6-220ENST00000576218 F2RP25116 425 aa11.81□□□□□ -0.52
SMG6-220ENST00000576218 TAS2R19P59542 299 aa11.81□□□□□ -0.52
SMG6-220ENST00000576218 MRPS10P82664 201 aaKnown RBP11.81□□□□□ -0.52
SMG6-220ENST00000576218 DGCR2P98153 550 aa11.81□□□□□ -0.52
SMG6-220ENST00000576218 DEFB121Q5J5C9 76 aa11.81□□□□□ -0.52
SMG6-220ENST00000576218 VAX1Q5SQQ9 334 aa11.81□□□□□ -0.52
SMG6-220ENST00000576218 DCUN1D4Q92564 292 aa11.81□□□□□ -0.52
SMG6-220ENST00000576218 DGCR14Q96DF8 476 aaKnown RBP11.81□□□□□ -0.52
SMG6-220ENST00000576218 USMG5Q96IX5 58 aa11.81□□□□□ -0.52
SMG6-220ENST00000576218 ABHD1Q96SE0 405 aa11.81□□□□□ -0.52
SMG6-220ENST00000576218 MIXL1Q9H2W2 232 aa11.81□□□□□ -0.52
SMG6-220ENST00000576218 PLEKHA2Q9HB19 425 aa11.81□□□□□ -0.52
SMG6-220ENST00000576218 RANGRFQ9HD47 186 aaPredicted RBP11.81□□□□□ -0.52
SMG6-220ENST00000576218 TMEM140Q9NV12 185 aa11.81□□□□□ -0.52
SMG6-220ENST00000576218 BET1LQ9NYM9 111 aa11.81□□□□□ -0.52
SMG6-220ENST00000576218 RABL2AQ9UBK7 228 aaPredicted RBP11.81□□□□□ -0.52
SMG6-220ENST00000576218 MTFP1Q9UDX5 166 aa11.81□□□□□ -0.52
SMG6-220ENST00000576218 RABL2BQ9UNT1 228 aa11.81□□□□□ -0.52
SMG6-220ENST00000576218 HMX3A6NHT5 357 aa11.8□□□□□ -0.52
SMG6-220ENST00000576218 GABARAPH6UMI1 98 aa11.8□□□□□ -0.52
SMG6-220ENST00000576218 PRH1P02810 166 aa11.8□□□□□ -0.52
SMG6-220ENST00000576218 CD3DP04234 171 aa11.8□□□□□ -0.52
SMG6-220ENST00000576218 DEFA4P12838 97 aa11.8□□□□□ -0.52
SMG6-220ENST00000576218 ZP3P21754 424 aa11.8□□□□□ -0.52
SMG6-220ENST00000576218 LPAR6P43657 344 aa11.8□□□□□ -0.52
SMG6-220ENST00000576218 PPP5CP53041 499 aa11.8□□□□□ -0.52
SMG6-220ENST00000576218 BRWD1-AS2P59051 145 aa11.8□□□□□ -0.52
SMG6-220ENST00000576218 RHOGP84095 191 aa11.8□□□□□ -0.52
SMG6-220ENST00000576218 ATP5G2Q06055 141 aa11.8□□□□□ -0.52
SMG6-220ENST00000576218 MRGPRG-AS1Q2M3A8 158 aa11.8□□□□□ -0.52
SMG6-220ENST00000576218 SCGB2B2Q4G0G5 96 aa11.8□□□□□ -0.52
SMG6-220ENST00000576218 ADAD2Q8NCV1 583 aaKnown RBP11.8□□□□□ -0.52
SMG6-220ENST00000576218 MCFD2Q8NI22 146 aa11.8□□□□□ -0.52
SMG6-220ENST00000576218 FAM223BA6NKX1 122 aa11.79□□□□□ -0.52
SMG6-220ENST00000576218 MARCH11A6NNE9 402 aa11.79□□□□□ -0.52
SMG6-220ENST00000576218 SNAPC5O75971 98 aa11.79□□□□□ -0.52
SMG6-220ENST00000576218 LY86O95711 162 aa11.79□□□□□ -0.52
SMG6-220ENST00000576218 RAB3DO95716 219 aa11.79□□□□□ -0.52
SMG6-220ENST00000576218 KRASP01116 189 aa11.79□□□□□ -0.52
SMG6-220ENST00000576218 ECI1P42126 302 aa11.79□□□□□ -0.52
SMG6-220ENST00000576218 KRTAP10-11P60412 298 aa11.79□□□□□ -0.52
SMG6-220ENST00000576218 EGFEM1PQ0D2K5 195 aa11.79□□□□□ -0.52
SMG6-220ENST00000576218 TBC1D26Q86UD7 250 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms