RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 MPTX1A8MV57 137 aa6.65□□□□□ -1.34
SMG6-218ENST00000575454 TEX22C9J3V5 150 aa6.65□□□□□ -1.34
SMG6-218ENST00000575454 CYB5BO43169 146 aa6.65□□□□□ -1.34
SMG6-218ENST00000575454 IGHV3-23P01764 117 aa6.65□□□□□ -1.34
SMG6-218ENST00000575454 ADMP35318 185 aa6.65□□□□□ -1.34
SMG6-218ENST00000575454 RPL27AP46776 148 aaKnown RBP6.65□□□□□ -1.34
SMG6-218ENST00000575454 PRR20EP86478 221 aa6.65□□□□□ -1.34
SMG6-218ENST00000575454 PRR20CP86479 221 aa6.65□□□□□ -1.34
SMG6-218ENST00000575454 PRR20DP86480 221 aa6.65□□□□□ -1.34
SMG6-218ENST00000575454 PRR20BP86481 221 aa6.65□□□□□ -1.34
SMG6-218ENST00000575454 PRR20AP86496 221 aa6.65□□□□□ -1.34
SMG6-218ENST00000575454 ARFRP1Q13795 201 aa6.65□□□□□ -1.34
SMG6-218ENST00000575454 P2RY14Q15391 338 aa6.65□□□□□ -1.34
SMG6-218ENST00000575454 C10orf55Q5SWW7 151 aa6.65□□□□□ -1.34
SMG6-218ENST00000575454 PLET1Q6UQ28 207 aa6.65□□□□□ -1.34
SMG6-218ENST00000575454 FANCD2OSQ96PS1 177 aa6.65□□□□□ -1.34
SMG6-218ENST00000575454 OR2A7Q96R45 310 aa6.65□□□□□ -1.34
SMG6-218ENST00000575454 RARRES2Q99969 163 aa6.65□□□□□ -1.34
SMG6-218ENST00000575454 PECRQ9BY49 303 aa6.65□□□□□ -1.34
SMG6-218ENST00000575454 CSTL1Q9H114 145 aa6.65□□□□□ -1.34
SMG6-218ENST00000575454 C11orf68Q9H3H3 251 aaKnown RBP6.65□□□□□ -1.34
SMG6-218ENST00000575454 THYN1Q9P016 225 aa6.65□□□□□ -1.34
SMG6-218ENST00000575454 FBXL17Q9UF56 701 aa6.65□□□□□ -1.34
SMG6-218ENST00000575454 SELENOKQ9Y6D0 94 aa6.65□□□□□ -1.34
SMG6-218ENST00000575454 DNAH6Q9C0G6 4158 aa6.65□□□□□ -1.35
SMG6-218ENST00000575454 LINC00473A8K010 186 aa6.64□□□□□ -1.35
SMG6-218ENST00000575454 C11orf94C9JXX5 98 aa6.64□□□□□ -1.35
SMG6-218ENST00000575454 SLC17A2O00624 439 aa6.64□□□□□ -1.35
SMG6-218ENST00000575454 FCGR3BO75015 233 aa6.64□□□□□ -1.35
SMG6-218ENST00000575454 KBTBD11O94819 623 aa6.64□□□□□ -1.35
SMG6-218ENST00000575454 FCGR3AP08637 254 aa6.64□□□□□ -1.35
SMG6-218ENST00000575454 IL6RP08887 468 aaPredicted RBP6.64□□□□□ -1.35
SMG6-218ENST00000575454 ZNF735P0CB33 412 aa6.64□□□□□ -1.35
SMG6-218ENST00000575454 CD36P16671 472 aa6.64□□□□□ -1.35
SMG6-218ENST00000575454 CTRB1P17538 263 aa6.64□□□□□ -1.35
SMG6-218ENST00000575454 RPL35AP18077 110 aaKnown RBP6.64□□□□□ -1.35
SMG6-218ENST00000575454 PSMD7P51665 324 aa6.64□□□□□ -1.35
SMG6-218ENST00000575454 NANOS2P60321 138 aaKnown RBP6.64□□□□□ -1.35
SMG6-218ENST00000575454 RAB11BQ15907 218 aa6.64□□□□□ -1.35
SMG6-218ENST00000575454 CTRB2Q6GPI1 263 aa6.64□□□□□ -1.35
SMG6-218ENST00000575454 UNQ9165/PRO28630Q6UXU0 137 aa6.64□□□□□ -1.35
SMG6-218ENST00000575454 NR2C2APQ86WQ0 139 aa6.64□□□□□ -1.35
SMG6-218ENST00000575454 CENPSQ8N2Z9 138 aa6.64□□□□□ -1.35
SMG6-218ENST00000575454 GVQW1Q8N7I0 195 aa6.64□□□□□ -1.35
SMG6-218ENST00000575454 OR4S2Q8NH73 311 aa6.64□□□□□ -1.35
SMG6-218ENST00000575454 TMEM167AQ8TBQ9 72 aa6.64□□□□□ -1.35
SMG6-218ENST00000575454 RAB3CQ96E17 227 aa6.64□□□□□ -1.35
SMG6-218ENST00000575454 C5orf30Q96GV9 206 aa6.64□□□□□ -1.35
SMG6-218ENST00000575454 AIFM2Q9BRQ8 373 aa6.64□□□□□ -1.35
SMG6-218ENST00000575454 KCNK15Q9H427 330 aa6.64□□□□□ -1.35
SMG6-218ENST00000575454 DAZ1Q9NQZ3 744 aaKnown RBP6.64□□□□□ -1.35
SMG6-218ENST00000575454 UBQLN2Q9UHD9 624 aa6.64□□□□□ -1.35
SMG6-218ENST00000575454 DNAH17Q9UFH2 4485 aa6.63□□□□□ -1.35
SMG6-218ENST00000575454 IGLL5B9A064 214 aa6.63□□□□□ -1.35
SMG6-218ENST00000575454 DENRO43583 198 aaKnown RBP6.63□□□□□ -1.35
SMG6-218ENST00000575454 UCHL1P09936 223 aa6.63□□□□□ -1.35
SMG6-218ENST00000575454 CTXN2P0C2S0 81 aa6.63□□□□□ -1.35
SMG6-218ENST00000575454 GADD45AP24522 165 aa6.63□□□□□ -1.35
SMG6-218ENST00000575454 PTBP1P26599 531 aaKnown RBP eCLIP6.63□□□□□ -1.35
SMG6-218ENST00000575454 TALDO1P37837 337 aa6.63□□□□□ -1.35
SMG6-218ENST00000575454 DYNC1H1Q14204 4646 aaKnown RBP6.63□□□□□ -1.35
SMG6-218ENST00000575454 INSL4Q14641 139 aa6.63□□□□□ -1.35
SMG6-218ENST00000575454 IRF3Q14653 427 aa6.63□□□□□ -1.35
SMG6-218ENST00000575454 ODF3L2Q3SX64 289 aa6.63□□□□□ -1.35
SMG6-218ENST00000575454 PLAC9Q5JTB6 97 aa6.63□□□□□ -1.35
SMG6-218ENST00000575454 KCTD9Q7L273 389 aa6.63□□□□□ -1.35
SMG6-218ENST00000575454 PQLC1Q8N2U9 271 aa6.63□□□□□ -1.35
SMG6-218ENST00000575454 ZNF645Q8N7E2 425 aa6.63□□□□□ -1.35
SMG6-218ENST00000575454 NANOGP1Q8N7R0 232 aa6.63□□□□□ -1.35
SMG6-218ENST00000575454 TMEM190Q8WZ59 177 aa6.63□□□□□ -1.35
SMG6-218ENST00000575454 ZNF436Q9C0F3 470 aaPredicted RBP6.63□□□□□ -1.35
SMG6-218ENST00000575454 RAB22AQ9UL26 194 aa6.63□□□□□ -1.35
SMG6-218ENST00000575454 IGLV11-55A0A075B6I3 123 aa6.62□□□□□ -1.35
SMG6-218ENST00000575454 ARL6IP5O75915 188 aa6.62□□□□□ -1.35
SMG6-218ENST00000575454 HRASP01112 189 aa6.62□□□□□ -1.35
SMG6-218ENST00000575454 AREGP15514 252 aa6.62□□□□□ -1.35
SMG6-218ENST00000575454 HLA-GP17693 338 aa6.62□□□□□ -1.35
SMG6-218ENST00000575454 FCGR2BP31994 310 aaPredicted RBP6.62□□□□□ -1.35
SMG6-218ENST00000575454 GPR183P32249 361 aa6.62□□□□□ -1.35
SMG6-218ENST00000575454 MFAP2P55001 183 aa6.62□□□□□ -1.35
SMG6-218ENST00000575454 RPL8P62917 257 aaKnown RBP6.62□□□□□ -1.35
SMG6-218ENST00000575454 ARL6IP1Q15041 203 aa6.62□□□□□ -1.35
SMG6-218ENST00000575454 SPSB3Q6PJ21 355 aa6.62□□□□□ -1.35
SMG6-218ENST00000575454 Q6ZS49 121 aa6.62□□□□□ -1.35
SMG6-218ENST00000575454 C19orf35Q6ZS72 473 aa6.62□□□□□ -1.35
SMG6-218ENST00000575454 H1FOOQ8IZA3 346 aaPredicted RBP6.62□□□□□ -1.35
SMG6-218ENST00000575454 OR11H2Q8NH07 326 aa6.62□□□□□ -1.35
SMG6-218ENST00000575454 OR5B3Q8NH48 314 aa6.62□□□□□ -1.35
SMG6-218ENST00000575454 OR4A5Q8NH83 315 aa6.62□□□□□ -1.35
SMG6-218ENST00000575454 ZNF502Q8TBZ5 544 aa6.62□□□□□ -1.35
SMG6-218ENST00000575454 CD300LFQ8TDQ1 290 aa6.62□□□□□ -1.35
SMG6-218ENST00000575454 VN1R17PQ8TDU5 208 aa6.62□□□□□ -1.35
SMG6-218ENST00000575454 CYGBQ8WWM9 190 aa6.62□□□□□ -1.35
SMG6-218ENST00000575454 FAM3DQ96BQ1 224 aa6.62□□□□□ -1.35
SMG6-218ENST00000575454 BSCL2Q96G97 398 aaPredicted RBP6.62□□□□□ -1.35
SMG6-218ENST00000575454 ATP6V0BQ99437 205 aa6.62□□□□□ -1.35
SMG6-218ENST00000575454 HSD17B10Q99714 261 aaKnown RBP6.62□□□□□ -1.35
SMG6-218ENST00000575454 SRSF8Q9BRL6 282 aaKnown RBP6.62□□□□□ -1.35
SMG6-218ENST00000575454 MND1Q9BWT6 205 aa6.62□□□□□ -1.35
SMG6-218ENST00000575454 HRH4Q9H3N8 390 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms