RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 OR9G9P0C7N8 305 aa19.26■□□□□ 0.67
ATPAF1-213ENST00000574428 THOC7Q6I9Y2 204 aaKnown RBP19.26■□□□□ 0.67
ATPAF1-213ENST00000574428 OR2T10Q8NGZ9 312 aa19.26■□□□□ 0.67
ATPAF1-213ENST00000574428 NSG2Q9Y328 171 aa19.26■□□□□ 0.67
ATPAF1-213ENST00000574428 TRAV3A0A0B4J244 114 aa19.25■□□□□ 0.67
ATPAF1-213ENST00000574428 SNAPC5O75971 98 aa19.25■□□□□ 0.67
ATPAF1-213ENST00000574428 FAM106CPP0CH98 169 aa19.25■□□□□ 0.67
ATPAF1-213ENST00000574428 C11orf87Q6NUJ2 197 aa19.25■□□□□ 0.67
ATPAF1-213ENST00000574428 C9orf139Q6ZV77 190 aa19.25■□□□□ 0.67
ATPAF1-213ENST00000574428 TEX29Q8N6K0 151 aa19.25■□□□□ 0.67
ATPAF1-213ENST00000574428 SPIN2AQ99865 258 aa19.25■□□□□ 0.67
ATPAF1-213ENST00000574428 SPIN2BQ9BPZ2 258 aa19.25■□□□□ 0.67
ATPAF1-213ENST00000574428 A0A1B0GU03 582 aa19.24■□□□□ 0.67
ATPAF1-213ENST00000574428 SLC25A17O43808 307 aa19.24■□□□□ 0.67
ATPAF1-213ENST00000574428 NXPH3O95157 252 aa19.24■□□□□ 0.67
ATPAF1-213ENST00000574428 MPC2O95563 127 aa19.24■□□□□ 0.67
ATPAF1-213ENST00000574428 SLC25A4P12235 298 aa19.24■□□□□ 0.67
ATPAF1-213ENST00000574428 LGALS7P47929 136 aa19.24■□□□□ 0.67
ATPAF1-213ENST00000574428 SMCO1Q147U7 214 aa19.24■□□□□ 0.67
ATPAF1-213ENST00000574428 OPCMLQ14982 345 aa19.24■□□□□ 0.67
ATPAF1-213ENST00000574428 SSX3Q99909 188 aa19.24■□□□□ 0.67
ATPAF1-213ENST00000574428 AIFM2Q9BRQ8 373 aa19.24■□□□□ 0.67
ATPAF1-213ENST00000574428 TMEM11P17152 192 aa19.24■□□□□ 0.67
ATPAF1-213ENST00000574428 SRP14P37108 136 aaKnown RBP19.24■□□□□ 0.67
ATPAF1-213ENST00000574428 F2RL1P55085 397 aa19.24■□□□□ 0.67
ATPAF1-213ENST00000574428 OR2B8PP59922 312 aa19.24■□□□□ 0.67
ATPAF1-213ENST00000574428 CYCSP99999 105 aaKnown RBP19.24■□□□□ 0.67
ATPAF1-213ENST00000574428 EBI3Q14213 229 aa19.24■□□□□ 0.67
ATPAF1-213ENST00000574428 LRRC75BQ2VPJ9 315 aa19.24■□□□□ 0.67
ATPAF1-213ENST00000574428 PIFOQ8TCI5 191 aa19.24■□□□□ 0.67
ATPAF1-213ENST00000574428 TSNAXQ99598 290 aaKnown RBP19.24■□□□□ 0.67
ATPAF1-213ENST00000574428 TPSG1Q9NRR2 321 aa19.24■□□□□ 0.67
ATPAF1-213ENST00000574428 DYNLT3P51808 116 aa19.23■□□□□ 0.67
ATPAF1-213ENST00000574428 UBE2KP61086 200 aa19.23■□□□□ 0.67
ATPAF1-213ENST00000574428 PSG5Q15238 335 aa19.23■□□□□ 0.67
ATPAF1-213ENST00000574428 MMDQ15546 238 aa19.23■□□□□ 0.67
ATPAF1-213ENST00000574428 VMA21Q3ZAQ7 101 aa19.23■□□□□ 0.67
ATPAF1-213ENST00000574428 PUSL1Q8N0Z8 303 aaKnown RBP19.23■□□□□ 0.67
ATPAF1-213ENST00000574428 Q8N6K4 173 aa19.23■□□□□ 0.67
ATPAF1-213ENST00000574428 OR8H1Q8NGG4 311 aa19.23■□□□□ 0.67
ATPAF1-213ENST00000574428 OR1S1Q8NH92 325 aa19.23■□□□□ 0.67
ATPAF1-213ENST00000574428 RNF5Q99942 180 aa19.23■□□□□ 0.67
ATPAF1-213ENST00000574428 SCGB1D2O95969 90 aa19.22■□□□□ 0.67
ATPAF1-213ENST00000574428 SLC25A6P12236 298 aa19.22■□□□□ 0.67
ATPAF1-213ENST00000574428 C4BPBP20851 252 aa19.22■□□□□ 0.67
ATPAF1-213ENST00000574428 TMEM65Q6PI78 240 aa19.22■□□□□ 0.67
ATPAF1-213ENST00000574428 TMUB2Q71RG4 321 aa19.22■□□□□ 0.67
ATPAF1-213ENST00000574428 ZNF546Q86UE3 836 aa19.22■□□□□ 0.67
ATPAF1-213ENST00000574428 THNSL2Q86YJ6 484 aa19.22■□□□□ 0.67
ATPAF1-213ENST00000574428 OR4D5Q8NGN0 318 aa19.22■□□□□ 0.67
ATPAF1-213ENST00000574428 H3BUX3 64 aa19.21■□□□□ 0.67
ATPAF1-213ENST00000574428 PITX3O75364 302 aa19.21■□□□□ 0.67
ATPAF1-213ENST00000574428 RBMXL2O75526 392 aaKnown RBP19.21■□□□□ 0.67
ATPAF1-213ENST00000574428 KBTBD11O94819 623 aa19.21■□□□□ 0.67
ATPAF1-213ENST00000574428 PSMB6P28072 239 aa19.21■□□□□ 0.67
ATPAF1-213ENST00000574428 S100A11P31949 105 aa19.21■□□□□ 0.67
ATPAF1-213ENST00000574428 RELBQ01201 579 aa19.21■□□□□ 0.67
ATPAF1-213ENST00000574428 IL15RAQ13261 267 aa19.21■□□□□ 0.67
ATPAF1-213ENST00000574428 TEX261Q6UWH6 196 aa19.21■□□□□ 0.67
ATPAF1-213ENST00000574428 ZNF767PQ75MW2 155 aa19.21■□□□□ 0.67
ATPAF1-213ENST00000574428 MFFQ9GZY8 342 aa19.21■□□□□ 0.67
ATPAF1-213ENST00000574428 BET1LQ9NYM9 111 aa19.21■□□□□ 0.67
ATPAF1-213ENST00000574428 U3KQ87 197 aa19.21■□□□□ 0.67
ATPAF1-213ENST00000574428 SONP18583 2426 aaKnown RBP19.21■□□□□ 0.67
ATPAF1-213ENST00000574428 IL6RP08887 468 aaPredicted RBP19.21■□□□□ 0.67
ATPAF1-213ENST00000574428 FOSL1P15407 271 aa19.21■□□□□ 0.67
ATPAF1-213ENST00000574428 HNF1AP20823 631 aa19.21■□□□□ 0.67
ATPAF1-213ENST00000574428 CXorf66Q5JRM2 361 aaPredicted RBP19.21■□□□□ 0.67
ATPAF1-213ENST00000574428 OR4A16Q8NH70 328 aa19.21■□□□□ 0.67
ATPAF1-213ENST00000574428 THAP6Q8TBB0 222 aa19.21■□□□□ 0.67
ATPAF1-213ENST00000574428 MBD2Q9UBB5 411 aa19.21■□□□□ 0.67
ATPAF1-213ENST00000574428 METTL1Q9UBP6 276 aaKnown RBP19.21■□□□□ 0.67
ATPAF1-213ENST00000574428 TNFSF18Q9UNG2 199 aa19.21■□□□□ 0.67
ATPAF1-213ENST00000574428 HIVEP1P15822 2718 aa19.2■□□□□ 0.66
ATPAF1-213ENST00000574428 MXRA5Q9NR99 2828 aa19.2■□□□□ 0.66
ATPAF1-213ENST00000574428 UPK2O00526 184 aa19.2■□□□□ 0.66
ATPAF1-213ENST00000574428 NBR2O15453 112 aa19.2■□□□□ 0.66
ATPAF1-213ENST00000574428 CLEC9AQ6UXN8 241 aa19.2■□□□□ 0.66
ATPAF1-213ENST00000574428 VSTM2AQ8TAG5 236 aa19.2■□□□□ 0.66
ATPAF1-213ENST00000574428 ZNF48Q96MX3 618 aaPredicted RBP19.2■□□□□ 0.66
ATPAF1-213ENST00000574428 QTRT1Q9BXR0 403 aaKnown RBP19.2■□□□□ 0.66
ATPAF1-213ENST00000574428 FBXL15Q9H469 300 aa19.2■□□□□ 0.66
ATPAF1-213ENST00000574428 CTNNBIP1Q9NSA3 81 aaPredicted RBP19.2■□□□□ 0.66
ATPAF1-213ENST00000574428 COA4Q9NYJ1 87 aa19.2■□□□□ 0.66
ATPAF1-213ENST00000574428 CRYGBP07316 175 aa19.19■□□□□ 0.66
ATPAF1-213ENST00000574428 S100A10P60903 97 aa19.19■□□□□ 0.66
ATPAF1-213ENST00000574428 Q71RC1 249 aaPredicted RBP19.19■□□□□ 0.66
ATPAF1-213ENST00000574428 TMEM219Q86XT9 240 aa19.19■□□□□ 0.66
ATPAF1-213ENST00000574428 FOXRED2Q8IWF2 684 aa19.19■□□□□ 0.66
ATPAF1-213ENST00000574428 SLC7A5P1Q8MH63 180 aa19.19■□□□□ 0.66
ATPAF1-213ENST00000574428 ARL6Q9H0F7 186 aa19.19■□□□□ 0.66
ATPAF1-213ENST00000574428 NCBP2LA6PVI3 153 aaKnown RBP19.19■□□□□ 0.66
ATPAF1-213ENST00000574428 RRHO14718 337 aa19.19■□□□□ 0.66
ATPAF1-213ENST00000574428 SPDEFO95238 335 aa19.19■□□□□ 0.66
ATPAF1-213ENST00000574428 MBPP02686 304 aaPredicted RBP19.19■□□□□ 0.66
ATPAF1-213ENST00000574428 MYOD1P15172 320 aa19.19■□□□□ 0.66
ATPAF1-213ENST00000574428 PJVKQ0ZLH3 352 aa19.19■□□□□ 0.66
ATPAF1-213ENST00000574428 RAB32Q13637 225 aa19.19■□□□□ 0.66
ATPAF1-213ENST00000574428 NDUFA5Q16718 116 aa19.19■□□□□ 0.66
ATPAF1-213ENST00000574428 TEX45Q8NA69 505 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms