RNA–Protein interactions for RNA: ENST00000574408.5

USP43-205, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 3,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-205ENST00000574408 RNF212Q495C1 297 aa8.63□□□□□ -1.03
USP43-205ENST00000574408 VKORC1L1Q8N0U8 176 aa8.63□□□□□ -1.03
USP43-205ENST00000574408 TMPRSS5Q9H3S3 457 aa8.63□□□□□ -1.03
USP43-205ENST00000574408 AURKAIP1Q9NWT8 199 aaPredicted RBP8.63□□□□□ -1.03
USP43-205ENST00000574408 GAB2Q9UQC2 676 aa8.63□□□□□ -1.03
USP43-205ENST00000574408 KPTNQ9Y664 436 aa8.63□□□□□ -1.03
USP43-205ENST00000574408 TRGC2P03986 189 aa8.62□□□□□ -1.03
USP43-205ENST00000574408 OR9G9P0C7N8 305 aa8.62□□□□□ -1.03
USP43-205ENST00000574408 C10orf91Q5T1B1 145 aa8.62□□□□□ -1.03
USP43-205ENST00000574408 TMEM14EPQ6UXP3 125 aa8.62□□□□□ -1.03
USP43-205ENST00000574408 KDF1Q8NAX2 398 aaPredicted RBP8.62□□□□□ -1.03
USP43-205ENST00000574408 OR4C12Q96R67 309 aa8.62□□□□□ -1.03
USP43-205ENST00000574408 PBDC1Q9BVG4 233 aa8.62□□□□□ -1.03
USP43-205ENST00000574408 ITGB1BP1O14713 200 aa8.62□□□□□ -1.03
USP43-205ENST00000574408 C1QTNF9P0C862 333 aa8.62□□□□□ -1.03
USP43-205ENST00000574408 ERVFRD-1P60508 538 aa8.62□□□□□ -1.03
USP43-205ENST00000574408 RPL31P62899 125 aaKnown RBP8.62□□□□□ -1.03
USP43-205ENST00000574408 MRPS11P82912 194 aaKnown RBP8.62□□□□□ -1.03
USP43-205ENST00000574408 QTRT1Q9BXR0 403 aaKnown RBP8.62□□□□□ -1.03
USP43-205ENST00000574408 MS4A5Q9H3V2 200 aa8.62□□□□□ -1.03
USP43-205ENST00000574408 H2AFB1P0C5Y9 115 aa8.61□□□□□ -1.03
USP43-205ENST00000574408 APOBEC3AP31941 199 aaPredicted RBP8.61□□□□□ -1.03
USP43-205ENST00000574408 ERVK-16P61578 105 aa8.61□□□□□ -1.03
USP43-205ENST00000574408 GAMTQ14353 236 aa8.61□□□□□ -1.03
USP43-205ENST00000574408 TGIF2-C20orf24A0A0A6YYL0 155 aa8.61□□□□□ -1.03
USP43-205ENST00000574408 UBE2L5PA0A1B0GUS4 154 aa8.61□□□□□ -1.03
USP43-205ENST00000574408 RBFOX2O43251 390 aaKnown RBP eCLIP8.61□□□□□ -1.03
USP43-205ENST00000574408 ZNF439Q8NDP4 499 aa8.61□□□□□ -1.03
USP43-205ENST00000574408 LFNGQ8NES3 379 aa8.61□□□□□ -1.03
USP43-205ENST00000574408 H1FXQ92522 213 aaKnown RBP8.61□□□□□ -1.03
USP43-205ENST00000574408 CORO2AQ92828 525 aa8.61□□□□□ -1.03
USP43-205ENST00000574408 CISD1Q9NZ45 108 aaKnown RBP8.61□□□□□ -1.03
USP43-205ENST00000574408 DOK5Q9P104 306 aa8.61□□□□□ -1.03
USP43-205ENST00000574408 RPUSD1Q9UJJ7 312 aaKnown RBP8.61□□□□□ -1.03
USP43-205ENST00000574408 LINC00312Q9Y6C7 94 aa8.61□□□□□ -1.03
USP43-205ENST00000574408 FAM157AC9JC47 383 aa8.61□□□□□ -1.03
USP43-205ENST00000574408 SMIM6P0DI80 62 aa8.61□□□□□ -1.03
USP43-205ENST00000574408 CCL3L1P16619 93 aa8.61□□□□□ -1.03
USP43-205ENST00000574408 ELLP55199 621 aaPredicted RBP8.61□□□□□ -1.03
USP43-205ENST00000574408 CCL20P78556 96 aa8.61□□□□□ -1.03
USP43-205ENST00000574408 S100A12P80511 92 aa8.61□□□□□ -1.03
USP43-205ENST00000574408 LYPD2Q6UXB3 125 aa8.61□□□□□ -1.03
USP43-205ENST00000574408 OR4A16Q8NH70 328 aa8.61□□□□□ -1.03
USP43-205ENST00000574408 FRZBQ92765 325 aa8.61□□□□□ -1.03
USP43-205ENST00000574408 RBMXL1Q96E39 390 aaKnown RBP8.61□□□□□ -1.03
USP43-205ENST00000574408 CIB3Q96Q77 187 aaPredicted RBP8.61□□□□□ -1.03
USP43-205ENST00000574408 SCRT1Q9BWW7 348 aa8.61□□□□□ -1.03
USP43-205ENST00000574408 ZNRD1Q9P1U0 126 aa8.61□□□□□ -1.03
USP43-205ENST00000574408 A0A087X0M5 115 aa8.6□□□□□ -1.03
USP43-205ENST00000574408 A0A1B0GX30 115 aa8.6□□□□□ -1.03
USP43-205ENST00000574408 KIR2DS2P43631 304 aa8.6□□□□□ -1.03
USP43-205ENST00000574408 CDSNQ15517 529 aa8.6□□□□□ -1.03
USP43-205ENST00000574408 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.6□□□□□ -1.03
USP43-205ENST00000574408 OR4S2Q8NH73 311 aa8.6□□□□□ -1.03
USP43-205ENST00000574408 TMEM37Q8WXS4 190 aa8.6□□□□□ -1.03
USP43-205ENST00000574408 TCEAL7Q9BRU2 100 aa8.6□□□□□ -1.03
USP43-205ENST00000574408 OR51M1Q9H341 326 aa8.6□□□□□ -1.03
USP43-205ENST00000574408 RELNP78509 3460 aa8.6□□□□□ -1.03
USP43-205ENST00000574408 BTBD17A6NE02 478 aa8.6□□□□□ -1.03
USP43-205ENST00000574408 B9A039 149 aa8.6□□□□□ -1.03
USP43-205ENST00000574408 FCN3O75636 299 aa8.6□□□□□ -1.03
USP43-205ENST00000574408 ADORA2A-AS1P86434 159 aa8.6□□□□□ -1.03
USP43-205ENST00000574408 LRRC75BQ2VPJ9 315 aa8.6□□□□□ -1.03
USP43-205ENST00000574408 FBXL19-AS1Q494R0 122 aa8.6□□□□□ -1.03
USP43-205ENST00000574408 WDR25Q64LD2 544 aaPredicted RBP8.6□□□□□ -1.03
USP43-205ENST00000574408 SPSB3Q6PJ21 355 aa8.6□□□□□ -1.03
USP43-205ENST00000574408 DDB2Q92466 427 aa8.6□□□□□ -1.03
USP43-205ENST00000574408 LINC00574Q9H8X3 128 aa8.6□□□□□ -1.03
USP43-205ENST00000574408 TMEM140Q9NV12 185 aa8.6□□□□□ -1.03
USP43-205ENST00000574408 TRAV3A0A0B4J244 114 aa8.6□□□□□ -1.03
USP43-205ENST00000574408 TSTD3H0UI37 97 aa8.6□□□□□ -1.03
USP43-205ENST00000574408 NDUFB3O43676 98 aa8.6□□□□□ -1.03
USP43-205ENST00000574408 THBS3P49746 956 aa8.6□□□□□ -1.03
USP43-205ENST00000574408 ADIRFQ15847 76 aa8.6□□□□□ -1.03
USP43-205ENST00000574408 SPNS3Q6ZMD2 512 aa8.6□□□□□ -1.03
USP43-205ENST00000574408 WDR61Q9GZS3 305 aaKnown RBP8.6□□□□□ -1.03
USP43-205ENST00000574408 GAL3ST2Q9H3Q3 398 aa8.6□□□□□ -1.03
USP43-205ENST00000574408 IGHV1-69-2A0A0G2JMI3 117 aa8.59□□□□□ -1.03
USP43-205ENST00000574408 SMCO3A2RU48 225 aa8.59□□□□□ -1.03
USP43-205ENST00000574408 ZNF705FA8MVS1 300 aaPredicted RBP8.59□□□□□ -1.03
USP43-205ENST00000574408 SIAH2O43255 324 aa8.59□□□□□ -1.03
USP43-205ENST00000574408 PPIHO43447 177 aaKnown RBP8.59□□□□□ -1.03
USP43-205ENST00000574408 OR8U8P0C7N1 319 aa8.59□□□□□ -1.03
USP43-205ENST00000574408 ZNF705DP0CH99 300 aaPredicted RBP8.59□□□□□ -1.03
USP43-205ENST00000574408 ZNF705BP0CI00 300 aaPredicted RBP8.59□□□□□ -1.03
USP43-205ENST00000574408 HNF1AP20823 631 aa8.59□□□□□ -1.03
USP43-205ENST00000574408 TLE4Q04727 773 aa8.59□□□□□ -1.03
USP43-205ENST00000574408 MEF2CQ06413 473 aaPredicted RBP8.59□□□□□ -1.03
USP43-205ENST00000574408 LY6DQ14210 128 aa8.59□□□□□ -1.03
USP43-205ENST00000574408 EFNB3Q15768 340 aa8.59□□□□□ -1.03
USP43-205ENST00000574408 LRRC10Q5BKY1 277 aa8.59□□□□□ -1.03
USP43-205ENST00000574408 C15orf54Q8N8G6 183 aa8.59□□□□□ -1.03
USP43-205ENST00000574408 ZNF714Q96N38 554 aa8.59□□□□□ -1.03
USP43-205ENST00000574408 RPRMQ9NS64 109 aa8.59□□□□□ -1.03
USP43-205ENST00000574408 TMEM30BQ3MIR4 351 aa8.59□□□□□ -1.03
USP43-205ENST00000574408 SLC25A48Q6ZT89 311 aaKnown RBP8.59□□□□□ -1.03
USP43-205ENST00000574408 OR10P1Q8NGE3 313 aa8.59□□□□□ -1.03
USP43-205ENST00000574408 TAF15Q92804 592 aaKnown RBP eCLIP8.59□□□□□ -1.03
USP43-205ENST00000574408 NIPSNAP3BQ9BS92 247 aa8.59□□□□□ -1.03
USP43-205ENST00000574408 VSIRQ9H7M9 311 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms