RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 CXorf21Q9HAI6 301 aa0.68□□□□□ -2.3
CDC27-216ENST00000574304 HRASLSQ9HDD0 168 aa0.68□□□□□ -2.3
CDC27-216ENST00000574304 RIMS2Q9UQ26 1411 aa0.67□□□□□ -2.3
CDC27-216ENST00000574304 IGKV1-9A0A0C4DH69 117 aa0.67□□□□□ -2.3
CDC27-216ENST00000574304 MSNP26038 577 aaKnown RBP0.67□□□□□ -2.3
CDC27-216ENST00000574304 REG1BP48304 166 aa0.67□□□□□ -2.3
CDC27-216ENST00000574304 RPS24P62847 133 aaKnown RBP0.67□□□□□ -2.3
CDC27-216ENST00000574304 PLPPR5Q32ZL2 321 aa0.67□□□□□ -2.3
CDC27-216ENST00000574304 RPP25LQ8N5L8 163 aaKnown RBP0.67□□□□□ -2.3
CDC27-216ENST00000574304 C9orf163Q8N9P6 203 aa0.67□□□□□ -2.3
CDC27-216ENST00000574304 OR2T27Q8NH04 317 aa0.67□□□□□ -2.3
CDC27-216ENST00000574304 CCL13Q99616 98 aa0.67□□□□□ -2.3
CDC27-216ENST00000574304 REG4Q9BYZ8 158 aa0.67□□□□□ -2.3
CDC27-216ENST00000574304 CHST6Q9GZX3 395 aa0.67□□□□□ -2.3
CDC27-216ENST00000574304 SLC22A4Q9H015 551 aa0.67□□□□□ -2.3
CDC27-216ENST00000574304 OR52A5Q9H2C5 316 aa0.67□□□□□ -2.3
CDC27-216ENST00000574304 TINCRA0A1B0GVN0 87 aa0.66□□□□□ -2.3
CDC27-216ENST00000574304 OR51F1A6NGY5 319 aa0.66□□□□□ -2.3
CDC27-216ENST00000574304 IBA57-AS1B1ANH7 110 aa0.66□□□□□ -2.3
CDC27-216ENST00000574304 HCRTO43612 131 aa0.66□□□□□ -2.3
CDC27-216ENST00000574304 SCN2BO60939 215 aa0.66□□□□□ -2.3
CDC27-216ENST00000574304 NSA2O95478 260 aaKnown RBP0.66□□□□□ -2.3
CDC27-216ENST00000574304 CCL5P13501 91 aa0.66□□□□□ -2.3
CDC27-216ENST00000574304 EBPQ15125 230 aaKnown RBP0.66□□□□□ -2.3
CDC27-216ENST00000574304 ACSM3Q53FZ2 586 aa0.66□□□□□ -2.3
CDC27-216ENST00000574304 FAM27BQ5VT28 67 aa0.66□□□□□ -2.3
CDC27-216ENST00000574304 DNM1P34Q6PK57 102 aa0.66□□□□□ -2.3
CDC27-216ENST00000574304 DYNAPQ8N1N2 210 aa0.66□□□□□ -2.3
CDC27-216ENST00000574304 ZNF676Q8N7Q3 588 aa0.66□□□□□ -2.3
CDC27-216ENST00000574304 ASB13Q8WXK3 278 aa0.66□□□□□ -2.3
CDC27-216ENST00000574304 PACRGQ96M98 296 aaPredicted RBP0.66□□□□□ -2.3
CDC27-216ENST00000574304 ERMAPQ96PL5 475 aaPredicted RBP0.66□□□□□ -2.3
CDC27-216ENST00000574304 NDEL1Q9GZM8 345 aa0.66□□□□□ -2.3
CDC27-216ENST00000574304 HES4Q9HCC6 221 aa0.66□□□□□ -2.3
CDC27-216ENST00000574304 PRELID1Q9Y255 219 aa0.66□□□□□ -2.3
CDC27-216ENST00000574304 TIMM22Q9Y584 194 aa0.66□□□□□ -2.3
CDC27-216ENST00000574304 SCAF11Q99590 1463 aaKnown RBP0.66□□□□□ -2.3
CDC27-216ENST00000574304 TRAPPC2LH3BP13 241 aa0.65□□□□□ -2.31
CDC27-216ENST00000574304 APOMO95445 188 aa0.65□□□□□ -2.31
CDC27-216ENST00000574304 HIST1H1CP16403 213 aaKnown RBP0.65□□□□□ -2.31
CDC27-216ENST00000574304 UGT2B7P16662 529 aa0.65□□□□□ -2.31
CDC27-216ENST00000574304 CD40LGP29965 261 aa0.65□□□□□ -2.31
CDC27-216ENST00000574304 HAAOP46952 286 aa0.65□□□□□ -2.31
CDC27-216ENST00000574304 FUNDC1Q8IVP5 155 aa0.65□□□□□ -2.31
CDC27-216ENST00000574304 UMODL1-AS1Q8N2C9 162 aa0.65□□□□□ -2.31
CDC27-216ENST00000574304 TBC1D19Q8N5T2 526 aa0.65□□□□□ -2.31
CDC27-216ENST00000574304 UBL4BQ8N7F7 174 aa0.65□□□□□ -2.31
CDC27-216ENST00000574304 OR8B3Q8NGG8 313 aa0.65□□□□□ -2.31
CDC27-216ENST00000574304 EEF1AKMT1Q8WVE0 214 aa0.65□□□□□ -2.31
CDC27-216ENST00000574304 DCUN1D5Q9BTE7 237 aa0.65□□□□□ -2.31
CDC27-216ENST00000574304 BBS2Q9BXC9 721 aa0.65□□□□□ -2.31
CDC27-216ENST00000574304 SETD5Q9C0A6 1442 aa0.64□□□□□ -2.31
CDC27-216ENST00000574304 ERICH2A1L162 156 aa0.64□□□□□ -2.31
CDC27-216ENST00000574304 TMEM212A6NML5 194 aa0.64□□□□□ -2.31
CDC27-216ENST00000574304 LEPROTO15243 131 aa0.64□□□□□ -2.31
CDC27-216ENST00000574304 RAB13P51153 203 aa0.64□□□□□ -2.31
CDC27-216ENST00000574304 SDHAF4Q5VUM1 108 aa0.64□□□□□ -2.31
CDC27-216ENST00000574304 SBSNQ6UWP8 590 aa0.64□□□□□ -2.31
CDC27-216ENST00000574304 SSX8Q7RTT4 187 aa0.64□□□□□ -2.31
CDC27-216ENST00000574304 DCXRQ7Z4W1 244 aa0.64□□□□□ -2.31
CDC27-216ENST00000574304 CD302Q8IX05 232 aa0.64□□□□□ -2.31
CDC27-216ENST00000574304 SGMS2Q8NHU3 365 aa0.64□□□□□ -2.31
CDC27-216ENST00000574304 DNAJB3Q8WWF6 145 aa0.64□□□□□ -2.31
CDC27-216ENST00000574304 EURLQ9NYK6 297 aa0.64□□□□□ -2.31
CDC27-216ENST00000574304 COQ4Q9Y3A0 265 aa0.64□□□□□ -2.31
CDC27-216ENST00000574304 SNURFQ9Y675 71 aa0.64□□□□□ -2.31
CDC27-216ENST00000574304 KIF24Q5T7B8 1368 aa0.64□□□□□ -2.31
CDC27-216ENST00000574304 RP1P56715 2156 aa0.64□□□□□ -2.31
CDC27-216ENST00000574304 CCDC88AQ3V6T2 1871 aa0.63□□□□□ -2.31
CDC27-216ENST00000574304 A0A1B0GW54 56 aa0.63□□□□□ -2.31
CDC27-216ENST00000574304 TMEM213A2RRL7 107 aa0.63□□□□□ -2.31
CDC27-216ENST00000574304 GOLGA6L10A6NI86 522 aa0.63□□□□□ -2.31
CDC27-216ENST00000574304 I3L521 148 aa0.63□□□□□ -2.31
CDC27-216ENST00000574304 SDCBPO00560 298 aaPredicted RBP0.63□□□□□ -2.31
CDC27-216ENST00000574304 NPPAP01160 153 aa0.63□□□□□ -2.31
CDC27-216ENST00000574304 REG1AP05451 166 aa0.63□□□□□ -2.31
CDC27-216ENST00000574304 HLA-DMBP28068 263 aa0.63□□□□□ -2.31
CDC27-216ENST00000574304 CSN1S1P47710 185 aa0.63□□□□□ -2.31
CDC27-216ENST00000574304 EVX1P49640 407 aa0.63□□□□□ -2.31
CDC27-216ENST00000574304 CXCR4P61073 352 aa0.63□□□□□ -2.31
CDC27-216ENST00000574304 HIST2H3AQ71DI3 136 aa0.63□□□□□ -2.31
CDC27-216ENST00000574304 SLC22A24Q8N4F4 322 aa0.63□□□□□ -2.31
CDC27-216ENST00000574304 HAVCR2Q8TDQ0 301 aa0.63□□□□□ -2.31
CDC27-216ENST00000574304 GPR84Q9NQS5 396 aa0.63□□□□□ -2.31
CDC27-216ENST00000574304 ANAPC10Q9UM13 185 aa0.63□□□□□ -2.31
CDC27-216ENST00000574304 IQCF5A8MTL0 148 aa0.62□□□□□ -2.31
CDC27-216ENST00000574304 HSBP1L1C9JCN9 74 aa0.62□□□□□ -2.31
CDC27-216ENST00000574304 ITGB1BP1O14713 200 aa0.62□□□□□ -2.31
CDC27-216ENST00000574304 GEMIN2O14893 280 aaKnown RBP0.62□□□□□ -2.31
CDC27-216ENST00000574304 HPGDSO60760 199 aa0.62□□□□□ -2.31
CDC27-216ENST00000574304 S100A7P31151 101 aa0.62□□□□□ -2.31
CDC27-216ENST00000574304 PPP1R1AQ13522 171 aa0.62□□□□□ -2.31
CDC27-216ENST00000574304 FAM19A5Q7Z5A7 132 aaPredicted RBP0.62□□□□□ -2.31
CDC27-216ENST00000574304 C10orf67Q8IYJ2 551 aa0.62□□□□□ -2.31
CDC27-216ENST00000574304 FAM19A2Q8N3H0 131 aa0.62□□□□□ -2.31
CDC27-216ENST00000574304 TMEM251Q8N6I4 163 aa0.62□□□□□ -2.31
CDC27-216ENST00000574304 CHMP4BQ9H444 224 aaKnown RBP0.62□□□□□ -2.31
CDC27-216ENST00000574304 GMEB1Q9Y692 573 aa0.62□□□□□ -2.31
CDC27-216ENST00000574304 LHFPL6Q9Y693 200 aa0.62□□□□□ -2.31
CDC27-216ENST00000574304 CACNA1BQ00975 2339 aa0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms