RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 STAG3L3P0CL85 134 aa15.79■□□□□ 0.12
SCARF1-206ENST00000573852 PRDX2P32119 198 aa15.79■□□□□ 0.12
SCARF1-206ENST00000573852 RPL39P5Q59GN2 51 aa15.79■□□□□ 0.12
SCARF1-206ENST00000573852 CNEP1R1Q8N9A8 125 aa15.79■□□□□ 0.12
SCARF1-206ENST00000573852 C1orf159Q96HA4 380 aa15.79■□□□□ 0.12
SCARF1-206ENST00000573852 TRIB1Q96RU8 372 aa15.79■□□□□ 0.12
SCARF1-206ENST00000573852 GNG12Q9UBI6 72 aa15.79■□□□□ 0.12
SCARF1-206ENST00000573852 M0R1X1 148 aa15.79■□□□□ 0.12
SCARF1-206ENST00000573852 IQCJQ1A5X6 159 aa15.79■□□□□ 0.12
SCARF1-206ENST00000573852 MORN2Q502X0 79 aa15.79■□□□□ 0.12
SCARF1-206ENST00000573852 PDLIM3Q53GG5 364 aaPredicted RBP15.79■□□□□ 0.12
SCARF1-206ENST00000573852 LRRC29Q8WV35 223 aa15.79■□□□□ 0.12
SCARF1-206ENST00000573852 TP53TG5Q9Y2B4 290 aa15.79■□□□□ 0.12
SCARF1-206ENST00000573852 GFRA3O60609 400 aa15.78■□□□□ 0.12
SCARF1-206ENST00000573852 BTF3P20290 206 aaKnown RBP15.78■□□□□ 0.12
SCARF1-206ENST00000573852 SOX8P57073 446 aa15.78■□□□□ 0.12
SCARF1-206ENST00000573852 TEX38Q6PEX7 206 aa15.78■□□□□ 0.12
SCARF1-206ENST00000573852 OCC1Q8TAD7 63 aa15.78■□□□□ 0.12
SCARF1-206ENST00000573852 MDFIC2A0A1B0GVS7 189 aa15.78■□□□□ 0.12
SCARF1-206ENST00000573852 KITLGP21583 273 aa15.78■□□□□ 0.12
SCARF1-206ENST00000573852 RPP30P78346 268 aaKnown RBP15.78■□□□□ 0.12
SCARF1-206ENST00000573852 RELBQ01201 579 aa15.78■□□□□ 0.12
SCARF1-206ENST00000573852 FAM90A1Q86YD7 464 aa15.78■□□□□ 0.12
SCARF1-206ENST00000573852 FKBP11Q9NYL4 201 aa15.78■□□□□ 0.12
SCARF1-206ENST00000573852 YTHDF2Q9Y5A9 579 aaKnown RBP15.78■□□□□ 0.12
SCARF1-206ENST00000573852 FAM90A9PA6NNJ1 464 aa15.77■□□□□ 0.12
SCARF1-206ENST00000573852 EREGO14944 169 aa15.77■□□□□ 0.12
SCARF1-206ENST00000573852 CECR9P0C854 216 aa15.77■□□□□ 0.12
SCARF1-206ENST00000573852 ZNF134P52741 427 aa15.77■□□□□ 0.12
SCARF1-206ENST00000573852 TMPRSS3P57727 454 aa15.77■□□□□ 0.12
SCARF1-206ENST00000573852 SSMEM1Q8WWF3 244 aa15.77■□□□□ 0.12
SCARF1-206ENST00000573852 LOC400499M0QZD8 3231 aa15.77■□□□□ 0.12
SCARF1-206ENST00000573852 SOX15O60248 233 aa15.77■□□□□ 0.11
SCARF1-206ENST00000573852 SCGB1D1O95968 90 aa15.77■□□□□ 0.11
SCARF1-206ENST00000573852 CXorf1O96002 111 aa15.77■□□□□ 0.11
SCARF1-206ENST00000573852 CD59P13987 128 aa15.77■□□□□ 0.11
SCARF1-206ENST00000573852 ADMP35318 185 aa15.77■□□□□ 0.11
SCARF1-206ENST00000573852 VWA1Q6PCB0 445 aa15.77■□□□□ 0.11
SCARF1-206ENST00000573852 THBS3P49746 956 aa15.76■□□□□ 0.11
SCARF1-206ENST00000573852 GUSBP1Q15486 140 aa15.76■□□□□ 0.11
SCARF1-206ENST00000573852 TRAT1Q6PIZ9 186 aa15.76■□□□□ 0.11
SCARF1-206ENST00000573852 TGIF2LXQ8IUE1 241 aa15.76■□□□□ 0.11
SCARF1-206ENST00000573852 TMEM178AQ8NBL3 297 aa15.76■□□□□ 0.11
SCARF1-206ENST00000573852 OR52E5Q8NH55 327 aa15.76■□□□□ 0.11
SCARF1-206ENST00000573852 BTF3L4Q96K17 158 aa15.76■□□□□ 0.11
SCARF1-206ENST00000573852 IGKV1D-17A0A075B6S4 117 aa15.76■□□□□ 0.11
SCARF1-206ENST00000573852 HOXC12P31275 282 aa15.76■□□□□ 0.11
SCARF1-206ENST00000573852 TIMP3P35625 211 aa15.76■□□□□ 0.11
SCARF1-206ENST00000573852 RAB4BP61018 213 aa15.76■□□□□ 0.11
SCARF1-206ENST00000573852 ZNF718Q3SXZ3 478 aa15.76■□□□□ 0.11
SCARF1-206ENST00000573852 SPATA31B1PQ5VZV4 182 aa15.76■□□□□ 0.11
SCARF1-206ENST00000573852 DHRS13Q6UX07 377 aa15.76■□□□□ 0.11
SCARF1-206ENST00000573852 C1orf229Q6ZS94 237 aaPredicted RBP15.76■□□□□ 0.11
SCARF1-206ENST00000573852 KIR2DL2P43627 348 aaPredicted RBP15.75■□□□□ 0.11
SCARF1-206ENST00000573852 UTF1Q5T230 341 aa15.75■□□□□ 0.11
SCARF1-206ENST00000573852 TXNDC17Q9BRA2 123 aa15.75■□□□□ 0.11
SCARF1-206ENST00000573852 TMEM140Q9NV12 185 aa15.75■□□□□ 0.11
SCARF1-206ENST00000573852 HEATR1Q9H583 2144 aaKnown RBP15.75■□□□□ 0.11
SCARF1-206ENST00000573852 CASP6P55212 293 aa15.75■□□□□ 0.11
SCARF1-206ENST00000573852 OR10G8Q8NGN5 311 aa15.75■□□□□ 0.11
SCARF1-206ENST00000573852 DUSP13Q9UII6 198 aa15.75■□□□□ 0.11
SCARF1-206ENST00000573852 TCF19Q9Y242 345 aa15.75■□□□□ 0.11
SCARF1-206ENST00000573852 POLR3KQ9Y2Y1 108 aaPredicted RBP15.75■□□□□ 0.11
SCARF1-206ENST00000573852 LSM4Q9Y4Z0 139 aaKnown RBP15.75■□□□□ 0.11
SCARF1-206ENST00000573852 SPENQ96T58 3664 aaKnown RBP15.74■□□□□ 0.11
SCARF1-206ENST00000573852 GRIFINA4D1Z8 144 aa15.74■□□□□ 0.11
SCARF1-206ENST00000573852 LOXL3P58215 753 aa15.74■□□□□ 0.11
SCARF1-206ENST00000573852 YPEL3P61236 119 aaPredicted RBP15.74■□□□□ 0.11
SCARF1-206ENST00000573852 ERVK-16P61578 105 aa15.74■□□□□ 0.11
SCARF1-206ENST00000573852 IFI27L2Q9H2X8 130 aa15.74■□□□□ 0.11
SCARF1-206ENST00000573852 SEPSECSQ9HD40 501 aaKnown RBP15.74■□□□□ 0.11
SCARF1-206ENST00000573852 JPT1Q9UK76 154 aa15.74■□□□□ 0.11
SCARF1-206ENST00000573852 TNFSF10P50591 281 aa15.74■□□□□ 0.11
SCARF1-206ENST00000573852 HLA-DRB5Q30154 266 aa15.74■□□□□ 0.11
SCARF1-206ENST00000573852 ARSJQ5FYB0 599 aaPredicted RBP15.74■□□□□ 0.11
SCARF1-206ENST00000573852 CYB5R2Q6BCY4 276 aa15.74■□□□□ 0.11
SCARF1-206ENST00000573852 IGHV3OR15-7A0A075B7D8 119 aa15.73■□□□□ 0.11
SCARF1-206ENST00000573852 K7EN84 100 aa15.73■□□□□ 0.11
SCARF1-206ENST00000573852 YPEL1O60688 119 aa15.73■□□□□ 0.11
SCARF1-206ENST00000573852 IL6RP08887 468 aaPredicted RBP15.73■□□□□ 0.11
SCARF1-206ENST00000573852 GCHFRP30047 84 aa15.73■□□□□ 0.11
SCARF1-206ENST00000573852 OR2Z1Q8NG97 314 aa15.73■□□□□ 0.11
SCARF1-206ENST00000573852 MS4A10Q96PG2 267 aa15.73■□□□□ 0.11
SCARF1-206ENST00000573852 YPEL2Q96QA6 119 aa15.73■□□□□ 0.11
SCARF1-206ENST00000573852 S1PR3Q99500 378 aa15.73■□□□□ 0.11
SCARF1-206ENST00000573852 NAGKQ9UJ70 344 aa15.73■□□□□ 0.11
SCARF1-206ENST00000573852 FOXH1O75593 365 aa15.73■□□□□ 0.11
SCARF1-206ENST00000573852 RPL31P62899 125 aaKnown RBP15.73■□□□□ 0.11
SCARF1-206ENST00000573852 EFNB3Q15768 340 aa15.73■□□□□ 0.11
SCARF1-206ENST00000573852 C9orf106Q8NAJ2 232 aa15.73■□□□□ 0.11
SCARF1-206ENST00000573852 NPVFQ9HCQ7 196 aa15.73■□□□□ 0.11
SCARF1-206ENST00000573852 TP53TG3Q9ULZ0 132 aa15.73■□□□□ 0.11
SCARF1-206ENST00000573852 SLC17A3O00476 420 aa15.72■□□□□ 0.11
SCARF1-206ENST00000573852 CBLN1P23435 193 aa15.72■□□□□ 0.11
SCARF1-206ENST00000573852 LEAP2Q969E1 77 aa15.72■□□□□ 0.11
SCARF1-206ENST00000573852 IGHV2OR16-5A0A0B4J2B6 119 aa15.72■□□□□ 0.11
SCARF1-206ENST00000573852 CD33P20138 364 aa15.72■□□□□ 0.11
SCARF1-206ENST00000573852 C1orf194Q5T5A4 169 aa15.72■□□□□ 0.11
SCARF1-206ENST00000573852 ZNRF1Q8ND25 227 aa15.72■□□□□ 0.11
SCARF1-206ENST00000573852 SNHG12Q9BXW3 62 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms