RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 MOB3AQ96BX8 217 aa13.25□□□□□ -0.29
SMG6-212ENST00000573153 PHB2Q99623 299 aa13.25□□□□□ -0.29
SMG6-212ENST00000573153 EHFQ9NZC4 300 aa13.25□□□□□ -0.29
SMG6-212ENST00000573153 COMMD3Q9UBI1 195 aa13.25□□□□□ -0.29
SMG6-212ENST00000573153 TEX22C9J3V5 150 aa13.24□□□□□ -0.29
SMG6-212ENST00000573153 ACTL6BO94805 426 aa13.24□□□□□ -0.29
SMG6-212ENST00000573153 IL6RP08887 468 aaPredicted RBP13.24□□□□□ -0.29
SMG6-212ENST00000573153 SPNP16150 400 aa13.24□□□□□ -0.29
SMG6-212ENST00000573153 GNRHRP30968 328 aa13.24□□□□□ -0.29
SMG6-212ENST00000573153 ALDH3B2P48448 385 aa13.24□□□□□ -0.29
SMG6-212ENST00000573153 CATR1Q13166 79 aa13.24□□□□□ -0.29
SMG6-212ENST00000573153 KLK9Q2XQG4 91 aa13.24□□□□□ -0.29
SMG6-212ENST00000573153 HAPLN4Q86UW8 402 aa13.24□□□□□ -0.29
SMG6-212ENST00000573153 LYSMD2Q8IV50 215 aa13.24□□□□□ -0.29
SMG6-212ENST00000573153 VKORC1L1Q8N0U8 176 aa13.24□□□□□ -0.29
SMG6-212ENST00000573153 OR4A5Q8NH83 315 aa13.24□□□□□ -0.29
SMG6-212ENST00000573153 CD300LFQ8TDQ1 290 aa13.24□□□□□ -0.29
SMG6-212ENST00000573153 MRPS26Q9BYN8 205 aaKnown RBP13.24□□□□□ -0.29
SMG6-212ENST00000573153 NAA50Q9GZZ1 169 aaKnown RBP13.24□□□□□ -0.29
SMG6-212ENST00000573153 COA4Q9NYJ1 87 aa13.24□□□□□ -0.29
SMG6-212ENST00000573153 BET1LQ9NYM9 111 aa13.24□□□□□ -0.29
SMG6-212ENST00000573153 KLK9Q9UKQ9 250 aa13.24□□□□□ -0.29
SMG6-212ENST00000573153 DMRT1Q9Y5R6 373 aa13.24□□□□□ -0.29
SMG6-212ENST00000573153 SMIM31A0A1B0GVY4 71 aa13.23□□□□□ -0.29
SMG6-212ENST00000573153 CGB1A6NKQ9 187 aa13.23□□□□□ -0.29
SMG6-212ENST00000573153 FAM223BA6NKX1 122 aa13.23□□□□□ -0.29
SMG6-212ENST00000573153 SULT1C2O00338 296 aa13.23□□□□□ -0.29
SMG6-212ENST00000573153 TNFSF12O43508 249 aa13.23□□□□□ -0.29
SMG6-212ENST00000573153 SAP30O75446 220 aa13.23□□□□□ -0.29
SMG6-212ENST00000573153 TPPPO94811 219 aa13.23□□□□□ -0.29
SMG6-212ENST00000573153 HPRT1P00492 218 aa13.23□□□□□ -0.29
SMG6-212ENST00000573153 FCER2P06734 321 aa13.23□□□□□ -0.29
SMG6-212ENST00000573153 ZNF735P0CB33 412 aa13.23□□□□□ -0.29
SMG6-212ENST00000573153 ELK1P19419 428 aa13.23□□□□□ -0.29
SMG6-212ENST00000573153 RFX2P48378 723 aa13.23□□□□□ -0.29
SMG6-212ENST00000573153 TAS2R31P59538 309 aa13.23□□□□□ -0.29
SMG6-212ENST00000573153 FXYD4P59646 89 aa13.23□□□□□ -0.29
SMG6-212ENST00000573153 HERV-K104P61576 105 aa13.23□□□□□ -0.29
SMG6-212ENST00000573153 KLF5Q13887 457 aaPredicted RBP13.23□□□□□ -0.29
SMG6-212ENST00000573153 C19orf35Q6ZS72 473 aa13.23□□□□□ -0.29
SMG6-212ENST00000573153 SLC25A42Q86VD7 318 aa13.23□□□□□ -0.29
SMG6-212ENST00000573153 FAM223AQ8IWN6 122 aa13.23□□□□□ -0.29
SMG6-212ENST00000573153 SPAG16Q8N0X2 631 aa13.23□□□□□ -0.29
SMG6-212ENST00000573153 OR5H2Q8NGV7 314 aa13.23□□□□□ -0.29
SMG6-212ENST00000573153 AP3S1Q92572 193 aa13.23□□□□□ -0.29
SMG6-212ENST00000573153 NPIPB5A8MRT5 1133 aa13.22□□□□□ -0.29
SMG6-212ENST00000573153 HPGDSO60760 199 aa13.22□□□□□ -0.29
SMG6-212ENST00000573153 IGLV1-51P01701 117 aa13.22□□□□□ -0.29
SMG6-212ENST00000573153 ZNF182P17025 639 aaPredicted RBP13.22□□□□□ -0.29
SMG6-212ENST00000573153 GPR107Q5VW38 600 aa13.22□□□□□ -0.29
SMG6-212ENST00000573153 MZT2AQ6P582 158 aa13.22□□□□□ -0.29
SMG6-212ENST00000573153 TMEM17Q86X19 198 aa13.22□□□□□ -0.29
SMG6-212ENST00000573153 CADM3Q8N126 398 aa13.22□□□□□ -0.29
SMG6-212ENST00000573153 ZNF2Q9BSG1 426 aaPredicted RBP13.22□□□□□ -0.29
SMG6-212ENST00000573153 PLEKHA2Q9HB19 425 aa13.22□□□□□ -0.29
SMG6-212ENST00000573153 ZNF257Q9Y2Q1 563 aa13.22□□□□□ -0.29
SMG6-212ENST00000573153 STAB2Q8WWQ8 2551 aa13.22□□□□□ -0.29
SMG6-212ENST00000573153 MPPED1O15442 326 aa13.21□□□□□ -0.29
SMG6-212ENST00000573153 PMP2P02689 132 aa13.21□□□□□ -0.29
SMG6-212ENST00000573153 PRH1P02810 166 aa13.21□□□□□ -0.29
SMG6-212ENST00000573153 NQO2P16083 231 aa13.21□□□□□ -0.29
SMG6-212ENST00000573153 RCVRNP35243 200 aa13.21□□□□□ -0.29
SMG6-212ENST00000573153 HRH1P35367 487 aa13.21□□□□□ -0.29
SMG6-212ENST00000573153 RPL27AP46776 148 aaKnown RBP13.21□□□□□ -0.29
SMG6-212ENST00000573153 RPL8P62917 257 aaKnown RBP13.21□□□□□ -0.29
SMG6-212ENST00000573153 FAM209BQ5JX69 171 aa13.21□□□□□ -0.29
SMG6-212ENST00000573153 OR4A47Q6IF82 309 aa13.21□□□□□ -0.29
SMG6-212ENST00000573153 NECAP1Q8NC96 275 aa13.21□□□□□ -0.29
SMG6-212ENST00000573153 THAP7Q9BT49 309 aaPredicted RBP13.21□□□□□ -0.29
SMG6-212ENST00000573153 FXYD6Q9H0Q3 95 aa13.21□□□□□ -0.29
SMG6-212ENST00000573153 AKIP1Q9NQ31 210 aa13.21□□□□□ -0.29
SMG6-212ENST00000573153 SLC2A9Q9NRM0 540 aa13.21□□□□□ -0.29
SMG6-212ENST00000573153 COMMD9Q9P000 198 aa13.21□□□□□ -0.29
SMG6-212ENST00000573153 PEF1Q9UBV8 284 aaKnown RBP13.21□□□□□ -0.29
SMG6-212ENST00000573153 TENM3Q9P273 2699 aa13.21□□□□□ -0.3
SMG6-212ENST00000573153 ANKRD34BA5PLL1 514 aa13.2□□□□□ -0.3
SMG6-212ENST00000573153 CRYGCP07315 174 aa13.2□□□□□ -0.3
SMG6-212ENST00000573153 GP9P14770 177 aa13.2□□□□□ -0.3
SMG6-212ENST00000573153 MYOD1P15172 320 aa13.2□□□□□ -0.3
SMG6-212ENST00000573153 HLA-GP17693 338 aa13.2□□□□□ -0.3
SMG6-212ENST00000573153 RHOGP84095 191 aa13.2□□□□□ -0.3
SMG6-212ENST00000573153 Q8N1Y9 231 aa13.2□□□□□ -0.3
SMG6-212ENST00000573153 OR6Q1Q8NGQ2 317 aa13.2□□□□□ -0.3
SMG6-212ENST00000573153 OR6F1Q8NGZ6 308 aa13.2□□□□□ -0.3
SMG6-212ENST00000573153 ELOVL1Q9BW60 279 aa13.2□□□□□ -0.3
SMG6-212ENST00000573153 DYNC2H1Q8NCM8 4307 aaKnown RBP13.2□□□□□ -0.3
SMG6-212ENST00000573153 HMX3A6NHT5 357 aa13.19□□□□□ -0.3
SMG6-212ENST00000573153 PGLYRP1O75594 196 aaPredicted RBP13.19□□□□□ -0.3
SMG6-212ENST00000573153 HLA-DMAP28067 261 aa13.19□□□□□ -0.3
SMG6-212ENST00000573153 AADACL3Q5VUY0 350 aa13.19□□□□□ -0.3
SMG6-212ENST00000573153 ADAMTSL5Q6ZMM2 481 aa13.19□□□□□ -0.3
SMG6-212ENST00000573153 GPR141Q7Z602 305 aa13.19□□□□□ -0.3
SMG6-212ENST00000573153 SNX29P2Q8IUI4 249 aa13.19□□□□□ -0.3
SMG6-212ENST00000573153 OR51H1Q8NH63 302 aa13.19□□□□□ -0.3
SMG6-212ENST00000573153 FANCD2OSQ96PS1 177 aa13.19□□□□□ -0.3
SMG6-212ENST00000573153 ASCL2Q99929 193 aa13.19□□□□□ -0.3
SMG6-212ENST00000573153 SRSF8Q9BRL6 282 aaKnown RBP13.19□□□□□ -0.3
SMG6-212ENST00000573153 FAM212BQ9NTI7 297 aaPredicted RBP13.19□□□□□ -0.3
SMG6-212ENST00000573153 SIGLEC8Q9NYZ4 499 aa13.19□□□□□ -0.3
SMG6-212ENST00000573153 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms