RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 RUNX1Q01196 453 aa16.04■□□□□ 0.16
CHMP6-204ENST00000572778 IL18Q14116 193 aa16.04■□□□□ 0.16
CHMP6-204ENST00000572778 PDLIM3Q53GG5 364 aaPredicted RBP16.04■□□□□ 0.16
CHMP6-204ENST00000572778 C10orf55Q5SWW7 151 aa16.04■□□□□ 0.16
CHMP6-204ENST00000572778 FOXB2Q5VYV0 432 aa16.04■□□□□ 0.16
CHMP6-204ENST00000572778 LPCAT3Q6P1A2 487 aa16.04■□□□□ 0.16
CHMP6-204ENST00000572778 TMEM167AQ8TBQ9 72 aa16.04■□□□□ 0.16
CHMP6-204ENST00000572778 CD300LFQ8TDQ1 290 aa16.04■□□□□ 0.16
CHMP6-204ENST00000572778 DPF1Q92782 380 aa16.04■□□□□ 0.16
CHMP6-204ENST00000572778 MCRIP2Q9BUT9 160 aaKnown RBP16.04■□□□□ 0.16
CHMP6-204ENST00000572778 TINAGL1Q9GZM7 467 aaPredicted RBP16.04■□□□□ 0.16
CHMP6-204ENST00000572778 SLIRPQ9GZT3 109 aaKnown RBP16.04■□□□□ 0.16
CHMP6-204ENST00000572778 ALX4Q9H161 411 aaPredicted RBP16.04■□□□□ 0.16
CHMP6-204ENST00000572778 H3BUA1 57 aa16.03■□□□□ 0.16
CHMP6-204ENST00000572778 GABARAPH6UMI1 98 aa16.03■□□□□ 0.16
CHMP6-204ENST00000572778 CD3DP04234 171 aa16.03■□□□□ 0.16
CHMP6-204ENST00000572778 ZNF616Q08AN1 781 aa16.03■□□□□ 0.16
CHMP6-204ENST00000572778 PHLDA2Q53GA4 152 aa16.03■□□□□ 0.16
CHMP6-204ENST00000572778 MCFD2Q8NI22 146 aa16.03■□□□□ 0.16
CHMP6-204ENST00000572778 SPIN2AQ99865 258 aa16.03■□□□□ 0.16
CHMP6-204ENST00000572778 SPIN2BQ9BPZ2 258 aa16.03■□□□□ 0.16
CHMP6-204ENST00000572778 HRASLSQ9HDD0 168 aa16.03■□□□□ 0.16
CHMP6-204ENST00000572778 COA4Q9NYJ1 87 aa16.03■□□□□ 0.16
CHMP6-204ENST00000572778 S1PR2O95136 353 aa16.02■□□□□ 0.16
CHMP6-204ENST00000572778 LGALS1P09382 135 aaKnown RBP16.02■□□□□ 0.16
CHMP6-204ENST00000572778 NQO2P16083 231 aa16.02■□□□□ 0.16
CHMP6-204ENST00000572778 S100GP29377 79 aa16.02■□□□□ 0.16
CHMP6-204ENST00000572778 TAS2R31P59538 309 aa16.02■□□□□ 0.16
CHMP6-204ENST00000572778 MRPS10P82664 201 aaKnown RBP16.02■□□□□ 0.16
CHMP6-204ENST00000572778 FHL3Q13643 280 aa16.02■□□□□ 0.16
CHMP6-204ENST00000572778 OR4A47Q6IF82 309 aa16.02■□□□□ 0.16
CHMP6-204ENST00000572778 GPR61Q9BZJ8 451 aa16.02■□□□□ 0.16
CHMP6-204ENST00000572778 C13orf42A0A1B0GVH6 325 aa16.01■□□□□ 0.15
CHMP6-204ENST00000572778 OR8U8P0C7N1 319 aa16.01■□□□□ 0.15
CHMP6-204ENST00000572778 OR9G9P0C7N8 305 aa16.01■□□□□ 0.15
CHMP6-204ENST00000572778 RPA2P15927 270 aa16.01■□□□□ 0.15
CHMP6-204ENST00000572778 TBPP20226 339 aa16.01■□□□□ 0.15
CHMP6-204ENST00000572778 F2RP25116 425 aa16.01■□□□□ 0.15
CHMP6-204ENST00000572778 MAS1LP35410 378 aa16.01■□□□□ 0.15
CHMP6-204ENST00000572778 RPL27AP46776 148 aaKnown RBP16.01■□□□□ 0.15
CHMP6-204ENST00000572778 TAS2R19P59542 299 aa16.01■□□□□ 0.15
CHMP6-204ENST00000572778 SLC38A6Q8IZM9 456 aa16.01■□□□□ 0.15
CHMP6-204ENST00000572778 TMEM229BQ8NBD8 167 aa16.01■□□□□ 0.15
CHMP6-204ENST00000572778 DMBX1Q8NFW5 382 aa16.01■□□□□ 0.15
CHMP6-204ENST00000572778 DGCR14Q96DF8 476 aaKnown RBP16.01■□□□□ 0.15
CHMP6-204ENST00000572778 FYTTD1Q96QD9 318 aaKnown RBP16.01■□□□□ 0.15
CHMP6-204ENST00000572778 RSRP1Q9BUV0 290 aa16.01■□□□□ 0.15
CHMP6-204ENST00000572778 PLEKHA2Q9HB19 425 aa16.01■□□□□ 0.15
CHMP6-204ENST00000572778 BET1LQ9NYM9 111 aa16.01■□□□□ 0.15
CHMP6-204ENST00000572778 LINC01619G3V211 115 aa16■□□□□ 0.15
CHMP6-204ENST00000572778 RAB3DO95716 219 aa16■□□□□ 0.15
CHMP6-204ENST00000572778 PGAM2P15259 253 aa16■□□□□ 0.15
CHMP6-204ENST00000572778 HOXD3P31249 432 aaPredicted RBP16■□□□□ 0.15
CHMP6-204ENST00000572778 LPAR6P43657 344 aa16■□□□□ 0.15
CHMP6-204ENST00000572778 UCP3P55916 312 aa16■□□□□ 0.15
CHMP6-204ENST00000572778 RPL8P62917 257 aaKnown RBP16■□□□□ 0.15
CHMP6-204ENST00000572778 ARRDC1Q8N5I2 433 aa16■□□□□ 0.15
CHMP6-204ENST00000572778 ADAD2Q8NCV1 583 aaKnown RBP16■□□□□ 0.15
CHMP6-204ENST00000572778 OR4A5Q8NH83 315 aa16■□□□□ 0.15
CHMP6-204ENST00000572778 COMMD9Q9P000 198 aa16■□□□□ 0.15
CHMP6-204ENST00000572778 RABL2AQ9UBK7 228 aaPredicted RBP16■□□□□ 0.15
CHMP6-204ENST00000572778 RSL24D1Q9UHA3 163 aaKnown RBP16■□□□□ 0.15
CHMP6-204ENST00000572778 RABL2BQ9UNT1 228 aa16■□□□□ 0.15
CHMP6-204ENST00000572778 NOTCH3Q9UM47 2321 aa15.99■□□□□ 0.15
CHMP6-204ENST00000572778 IGHV4OR15-8A0A075B7B6 117 aa15.99■□□□□ 0.15
CHMP6-204ENST00000572778 A0A087WW49 117 aa15.99■□□□□ 0.15
CHMP6-204ENST00000572778 A0A0G2JLM5 398 aa15.99■□□□□ 0.15
CHMP6-204ENST00000572778 HMX3A6NHT5 357 aa15.99■□□□□ 0.15
CHMP6-204ENST00000572778 TNFSF8P32971 234 aa15.99■□□□□ 0.15
CHMP6-204ENST00000572778 ERVK-16P61578 105 aa15.99■□□□□ 0.15
CHMP6-204ENST00000572778 DEFA5Q01523 94 aa15.99■□□□□ 0.15
CHMP6-204ENST00000572778 SSBP1Q04837 148 aaKnown RBP15.99■□□□□ 0.15
CHMP6-204ENST00000572778 POU2AF1Q16633 256 aa15.99■□□□□ 0.15
CHMP6-204ENST00000572778 STEAP1BQ6NZ63 245 aa15.99■□□□□ 0.15
CHMP6-204ENST00000572778 OR4D10Q8NGI6 311 aa15.99■□□□□ 0.15
CHMP6-204ENST00000572778 SMIM4Q8WVI0 70 aa15.99■□□□□ 0.15
CHMP6-204ENST00000572778 NXF2Q9GZY0 626 aaKnown RBP15.99■□□□□ 0.15
CHMP6-204ENST00000572778 RBM38Q9H0Z9 239 aaKnown RBP15.99■□□□□ 0.15
CHMP6-204ENST00000572778 TMEM140Q9NV12 185 aa15.99■□□□□ 0.15
CHMP6-204ENST00000572778 TRAV3A0A0B4J244 114 aa15.98■□□□□ 0.15
CHMP6-204ENST00000572778 E7EUB6 86 aa15.98■□□□□ 0.15
CHMP6-204ENST00000572778 UPK2O00526 184 aa15.98■□□□□ 0.15
CHMP6-204ENST00000572778 CTDSPLO15194 276 aa15.98■□□□□ 0.15
CHMP6-204ENST00000572778 PRH1P02810 166 aa15.98■□□□□ 0.15
CHMP6-204ENST00000572778 CD74P04233 296 aa15.98■□□□□ 0.15
CHMP6-204ENST00000572778 HSPB1P04792 205 aaKnown RBP15.98■□□□□ 0.15
CHMP6-204ENST00000572778 IL6RP08887 468 aaPredicted RBP15.98■□□□□ 0.15
CHMP6-204ENST00000572778 MYOD1P15172 320 aa15.98■□□□□ 0.15
CHMP6-204ENST00000572778 HLA-GP17693 338 aa15.98■□□□□ 0.15
CHMP6-204ENST00000572778 REC114Q7Z4M0 266 aa15.98■□□□□ 0.15
CHMP6-204ENST00000572778 TBC1D26Q86UD7 250 aa15.98■□□□□ 0.15
CHMP6-204ENST00000572778 AURKAIP1Q9NWT8 199 aaPredicted RBP15.98■□□□□ 0.15
CHMP6-204ENST00000572778 DPPA5A6NC42 116 aa15.97■□□□□ 0.15
CHMP6-204ENST00000572778 FABP12A6NFH5 140 aa15.97■□□□□ 0.15
CHMP6-204ENST00000572778 SEC14L6B5MCN3 397 aa15.97■□□□□ 0.15
CHMP6-204ENST00000572778 TEX22C9J3V5 150 aa15.97■□□□□ 0.15
CHMP6-204ENST00000572778 BRI3O95415 125 aa15.97■□□□□ 0.15
CHMP6-204ENST00000572778 SLURP1P55000 103 aa15.97■□□□□ 0.15
CHMP6-204ENST00000572778 SCGB2B2Q4G0G5 96 aa15.97■□□□□ 0.15
CHMP6-204ENST00000572778 ZNF585BQ52M93 769 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms