RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 GGTLC1Q9BX51 225 aa8.95□□□□□ -0.98
CCDC40-207ENST00000572253 JPT1Q9UK76 154 aa8.95□□□□□ -0.98
CCDC40-207ENST00000572253 M0QZK8 103 aa8.95□□□□□ -0.98
CCDC40-207ENST00000572253 RBFOX2O43251 390 aaKnown RBP eCLIP8.95□□□□□ -0.98
CCDC40-207ENST00000572253 GCHFRP30047 84 aa8.95□□□□□ -0.98
CCDC40-207ENST00000572253 RNF151Q2KHN1 245 aa8.95□□□□□ -0.98
CCDC40-207ENST00000572253 TOMM20LQ6UXN7 152 aa8.95□□□□□ -0.98
CCDC40-207ENST00000572253 BAGE3Q86Y29 109 aa8.95□□□□□ -0.98
CCDC40-207ENST00000572253 BAGE2Q86Y30 109 aa8.95□□□□□ -0.98
CCDC40-207ENST00000572253 ZNF114Q8NC26 417 aa8.95□□□□□ -0.98
CCDC40-207ENST00000572253 LRRC29Q8WV35 223 aa8.95□□□□□ -0.98
CCDC40-207ENST00000572253 IL36BQ9NZH7 164 aa8.95□□□□□ -0.98
CCDC40-207ENST00000572253 SPRR3Q9UBC9 169 aa8.95□□□□□ -0.98
CCDC40-207ENST00000572253 EP300Q09472 2414 aaPredicted RBP8.94□□□□□ -0.98
CCDC40-207ENST00000572253 FABP6P51161 128 aa8.94□□□□□ -0.98
CCDC40-207ENST00000572253 LINC00205P59089 165 aa8.94□□□□□ -0.98
CCDC40-207ENST00000572253 GCNT2Q8N0V5 402 aa8.94□□□□□ -0.98
CCDC40-207ENST00000572253 SSMEM1Q8WWF3 244 aa8.94□□□□□ -0.98
CCDC40-207ENST00000572253 MGST2Q99735 147 aa8.94□□□□□ -0.98
CCDC40-207ENST00000572253 SAMD10Q9BYL1 202 aa8.94□□□□□ -0.98
CCDC40-207ENST00000572253 NCOR1O75376 2440 aa8.94□□□□□ -0.98
CCDC40-207ENST00000572253 PRDX2P32119 198 aa8.94□□□□□ -0.98
CCDC40-207ENST00000572253 ETFRF1Q6IPR1 90 aa8.94□□□□□ -0.98
CCDC40-207ENST00000572253 TCF23Q7RTU1 214 aa8.94□□□□□ -0.98
CCDC40-207ENST00000572253 C11orf53Q8IXP5 236 aa8.94□□□□□ -0.98
CCDC40-207ENST00000572253 CNEP1R1Q8N9A8 125 aa8.94□□□□□ -0.98
CCDC40-207ENST00000572253 OCC1Q8TAD7 63 aa8.94□□□□□ -0.98
CCDC40-207ENST00000572253 CORO2AQ92828 525 aa8.94□□□□□ -0.98
CCDC40-207ENST00000572253 RAB9BQ9NP90 201 aa8.94□□□□□ -0.98
CCDC40-207ENST00000572253 POLR3KQ9Y2Y1 108 aaPredicted RBP8.94□□□□□ -0.98
CCDC40-207ENST00000572253 KIR2DL5BA0A0G2JN68 375 aa8.94□□□□□ -0.98
CCDC40-207ENST00000572253 KIR2DL5BA0A0G2JPC4 375 aa8.94□□□□□ -0.98
CCDC40-207ENST00000572253 RRHO14718 337 aa8.94□□□□□ -0.98
CCDC40-207ENST00000572253 TFF1P04155 84 aa8.94□□□□□ -0.98
CCDC40-207ENST00000572253 AARDQ4LEZ3 155 aa8.94□□□□□ -0.98
CCDC40-207ENST00000572253 TEPPQ6URK8 271 aa8.94□□□□□ -0.98
CCDC40-207ENST00000572253 KIR2DL5AQ8N109 375 aa8.94□□□□□ -0.98
CCDC40-207ENST00000572253 Q8N7P7 452 aa8.94□□□□□ -0.98
CCDC40-207ENST00000572253 OR4S2Q8NH73 311 aa8.94□□□□□ -0.98
CCDC40-207ENST00000572253 TMEM106BQ9NUM4 274 aa8.94□□□□□ -0.98
CCDC40-207ENST00000572253 TCF19Q9Y242 345 aa8.94□□□□□ -0.98
CCDC40-207ENST00000572253 PRUNE2Q8WUY3 3088 aa8.93□□□□□ -0.98
CCDC40-207ENST00000572253 ZNF883P0CG24 379 aa8.93□□□□□ -0.98
CCDC40-207ENST00000572253 RPL29P47914 159 aaKnown RBP8.93□□□□□ -0.98
CCDC40-207ENST00000572253 THBS3P49746 956 aa8.93□□□□□ -0.98
CCDC40-207ENST00000572253 RPEL1Q2QD12 228 aa8.93□□□□□ -0.98
CCDC40-207ENST00000572253 OR1L6Q8NGR2 347 aa8.93□□□□□ -0.98
CCDC40-207ENST00000572253 PLPPR2Q96GM1 343 aa8.93□□□□□ -0.98
CCDC40-207ENST00000572253 SNHG12Q9BXW3 62 aa8.93□□□□□ -0.98
CCDC40-207ENST00000572253 MRPL18Q9H0U6 180 aaKnown RBP8.93□□□□□ -0.98
CCDC40-207ENST00000572253 PARD6AQ9NPB6 346 aa8.93□□□□□ -0.98
CCDC40-207ENST00000572253 GTF3C1Q12789 2109 aa8.93□□□□□ -0.98
CCDC40-207ENST00000572253 GRIFINA4D1Z8 144 aa8.93□□□□□ -0.98
CCDC40-207ENST00000572253 FCN1O00602 326 aa8.93□□□□□ -0.98
CCDC40-207ENST00000572253 AQP7O14520 342 aa8.93□□□□□ -0.98
CCDC40-207ENST00000572253 IL6RP08887 468 aaPredicted RBP8.93□□□□□ -0.98
CCDC40-207ENST00000572253 VDAC2P45880 294 aaPredicted RBP8.93□□□□□ -0.98
CCDC40-207ENST00000572253 TMPRSS3P57727 454 aa8.93□□□□□ -0.98
CCDC40-207ENST00000572253 RPL31P62899 125 aaKnown RBP8.93□□□□□ -0.98
CCDC40-207ENST00000572253 Q6ZR03 302 aa8.93□□□□□ -0.98
CCDC40-207ENST00000572253 Q6ZT83 130 aa8.93□□□□□ -0.98
CCDC40-207ENST00000572253 ABHD12Q8N2K0 398 aa8.93□□□□□ -0.98
CCDC40-207ENST00000572253 NEU1Q99519 415 aa8.93□□□□□ -0.98
CCDC40-207ENST00000572253 DCTN5Q9BTE1 182 aa8.93□□□□□ -0.98
CCDC40-207ENST00000572253 MSL2Q9HCI7 577 aa8.93□□□□□ -0.98
CCDC40-207ENST00000572253 TMEM140Q9NV12 185 aa8.93□□□□□ -0.98
CCDC40-207ENST00000572253 METRNQ9UJH8 293 aa8.93□□□□□ -0.98
CCDC40-207ENST00000572253 CBLN1P23435 193 aa8.93□□□□□ -0.98
CCDC40-207ENST00000572253 NPY1RP25929 384 aa8.93□□□□□ -0.98
CCDC40-207ENST00000572253 FAM214BQ7L5A3 538 aa8.93□□□□□ -0.98
CCDC40-207ENST00000572253 TRIB1Q96RU8 372 aa8.93□□□□□ -0.98
CCDC40-207ENST00000572253 LY96Q9Y6Y9 160 aa8.93□□□□□ -0.98
CCDC40-207ENST00000572253 EYSQ5T1H1 3165 aa8.92□□□□□ -0.98
CCDC40-207ENST00000572253 C15orf65H3BRN8 121 aa8.92□□□□□ -0.98
CCDC40-207ENST00000572253 MGST3O14880 152 aa8.92□□□□□ -0.98
CCDC40-207ENST00000572253 GFRA3O60609 400 aa8.92□□□□□ -0.98
CCDC40-207ENST00000572253 AGFG2O95081 481 aa8.92□□□□□ -0.98
CCDC40-207ENST00000572253 SELENOTP62341 195 aa8.92□□□□□ -0.98
CCDC40-207ENST00000572253 TMEM183BQ1AE95 376 aa8.92□□□□□ -0.98
CCDC40-207ENST00000572253 C1orf210Q8IVY1 113 aa8.92□□□□□ -0.98
CCDC40-207ENST00000572253 IL17BQ9UHF5 180 aa8.92□□□□□ -0.98
CCDC40-207ENST00000572253 FZR1Q9UM11 496 aa8.92□□□□□ -0.98
CCDC40-207ENST00000572253 PCSK5Q92824 1860 aa8.92□□□□□ -0.98
CCDC40-207ENST00000572253 TRBV9A0A0B4J1U6 114 aa8.92□□□□□ -0.98
CCDC40-207ENST00000572253 A0A1B0GUS0 222 aa8.92□□□□□ -0.98
CCDC40-207ENST00000572253 C9JCJ5 164 aa8.92□□□□□ -0.98
CCDC40-207ENST00000572253 YPEL1O60688 119 aa8.92□□□□□ -0.98
CCDC40-207ENST00000572253 RAB7AP51149 207 aa8.92□□□□□ -0.98
CCDC40-207ENST00000572253 MORN2Q502X0 79 aa8.92□□□□□ -0.98
CCDC40-207ENST00000572253 MRPL52Q86TS9 123 aaKnown RBP8.92□□□□□ -0.98
CCDC40-207ENST00000572253 STPG3Q8N7X2 389 aa8.92□□□□□ -0.98
CCDC40-207ENST00000572253 OR5AU1Q8NGC0 362 aa8.92□□□□□ -0.98
CCDC40-207ENST00000572253 YPEL2Q96QA6 119 aa8.92□□□□□ -0.98
CCDC40-207ENST00000572253 TRBV20OR9-2A0A075B6H5 130 aa8.92□□□□□ -0.98
CCDC40-207ENST00000572253 TRGV8A0A0C4DH27 118 aa8.92□□□□□ -0.98
CCDC40-207ENST00000572253 RELBQ01201 579 aa8.92□□□□□ -0.98
CCDC40-207ENST00000572253 VKORC1L1Q8N0U8 176 aa8.92□□□□□ -0.98
CCDC40-207ENST00000572253 SLC24A4Q8NFF2 622 aa8.92□□□□□ -0.98
CCDC40-207ENST00000572253 HSPB9Q9BQS6 159 aa8.92□□□□□ -0.98
CCDC40-207ENST00000572253 ATG101Q9BSB4 218 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms