RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 SCOCQ9UIL1 159 aa10.05□□□□□ -0.8
CNOT1-220ENST00000569916 TEX22C9J3V5 150 aa10.04□□□□□ -0.8
CNOT1-220ENST00000569916 OVOL1O14753 267 aa10.04□□□□□ -0.8
CNOT1-220ENST00000569916 MPPED1O15442 326 aa10.04□□□□□ -0.8
CNOT1-220ENST00000569916 RBMXL2O75526 392 aaKnown RBP10.04□□□□□ -0.8
CNOT1-220ENST00000569916 HSPB1P04792 205 aaKnown RBP10.04□□□□□ -0.8
CNOT1-220ENST00000569916 OR9G9P0C7N8 305 aa10.04□□□□□ -0.8
CNOT1-220ENST00000569916 DGCR2P98153 550 aa10.04□□□□□ -0.8
CNOT1-220ENST00000569916 RNASE12Q5GAN4 147 aaKnown RBP10.04□□□□□ -0.8
CNOT1-220ENST00000569916 AADACL3Q5VUY0 350 aa10.04□□□□□ -0.8
CNOT1-220ENST00000569916 OR4A47Q6IF82 309 aa10.04□□□□□ -0.8
CNOT1-220ENST00000569916 OR6F1Q8NGZ6 308 aa10.04□□□□□ -0.8
CNOT1-220ENST00000569916 RAB2BQ8WUD1 216 aa10.04□□□□□ -0.8
CNOT1-220ENST00000569916 SPIN2AQ99865 258 aa10.04□□□□□ -0.8
CNOT1-220ENST00000569916 SPIN2BQ9BPZ2 258 aa10.04□□□□□ -0.8
CNOT1-220ENST00000569916 MIXL1Q9H2W2 232 aa10.04□□□□□ -0.8
CNOT1-220ENST00000569916 BET1LQ9NYM9 111 aa10.04□□□□□ -0.8
CNOT1-220ENST00000569916 A0A0G2JLM5 398 aa10.03□□□□□ -0.8
CNOT1-220ENST00000569916 C13orf42A0A1B0GVH6 325 aa10.03□□□□□ -0.8
CNOT1-220ENST00000569916 A0A1B0GW64 132 aa10.03□□□□□ -0.8
CNOT1-220ENST00000569916 E7EUB6 86 aa10.03□□□□□ -0.8
CNOT1-220ENST00000569916 S1PR2O95136 353 aa10.03□□□□□ -0.8
CNOT1-220ENST00000569916 HPRT1P00492 218 aa10.03□□□□□ -0.8
CNOT1-220ENST00000569916 RLN1P04808 185 aa10.03□□□□□ -0.8
CNOT1-220ENST00000569916 MAS1LP35410 378 aa10.03□□□□□ -0.8
CNOT1-220ENST00000569916 RPL27AP46776 148 aaKnown RBP10.03□□□□□ -0.8
CNOT1-220ENST00000569916 TMBIM6P55061 237 aa10.03□□□□□ -0.8
CNOT1-220ENST00000569916 TAS2R31P59538 309 aa10.03□□□□□ -0.8
CNOT1-220ENST00000569916 ZNF45Q02386 682 aa10.03□□□□□ -0.8
CNOT1-220ENST00000569916 POU2AF1Q16633 256 aa10.03□□□□□ -0.8
CNOT1-220ENST00000569916 LAX1Q8IWV1 398 aa10.03□□□□□ -0.8
CNOT1-220ENST00000569916 BCL7BQ9BQE9 202 aa10.03□□□□□ -0.8
CNOT1-220ENST00000569916 TRBV9A0A0B4J1U6 114 aa10.02□□□□□ -0.81
CNOT1-220ENST00000569916 HMX3A6NHT5 357 aa10.02□□□□□ -0.81
CNOT1-220ENST00000569916 GPR31O00270 319 aa10.02□□□□□ -0.81
CNOT1-220ENST00000569916 PGLYRP1O75594 196 aaPredicted RBP10.02□□□□□ -0.81
CNOT1-220ENST00000569916 TPPPO94811 219 aa10.02□□□□□ -0.81
CNOT1-220ENST00000569916 PRH1P02810 166 aa10.02□□□□□ -0.81
CNOT1-220ENST00000569916 IL6RP08887 468 aaPredicted RBP10.02□□□□□ -0.81
CNOT1-220ENST00000569916 ZNF735P0CB33 412 aa10.02□□□□□ -0.81
CNOT1-220ENST00000569916 MYOD1P15172 320 aa10.02□□□□□ -0.81
CNOT1-220ENST00000569916 NQO2P16083 231 aa10.02□□□□□ -0.81
CNOT1-220ENST00000569916 RPL5P46777 297 aaKnown RBP10.02□□□□□ -0.81
CNOT1-220ENST00000569916 INSL3P51460 131 aa10.02□□□□□ -0.81
CNOT1-220ENST00000569916 RPL8P62917 257 aaKnown RBP10.02□□□□□ -0.81
CNOT1-220ENST00000569916 VAX1Q5SQQ9 334 aa10.02□□□□□ -0.81
CNOT1-220ENST00000569916 ZNF343Q6P1L6 599 aa10.02□□□□□ -0.81
CNOT1-220ENST00000569916 TTC9CQ8N5M4 171 aa10.02□□□□□ -0.81
CNOT1-220ENST00000569916 OR52I2Q8NH67 350 aa10.02□□□□□ -0.81
CNOT1-220ENST00000569916 OR4A5Q8NH83 315 aa10.02□□□□□ -0.81
CNOT1-220ENST00000569916 DYNC2LI1Q8TCX1 351 aa10.02□□□□□ -0.81
CNOT1-220ENST00000569916 CD300LFQ8TDQ1 290 aa10.02□□□□□ -0.81
CNOT1-220ENST00000569916 USMG5Q96IX5 58 aa10.02□□□□□ -0.81
CNOT1-220ENST00000569916 ABHD1Q96SE0 405 aa10.02□□□□□ -0.81
CNOT1-220ENST00000569916 AIFM2Q9BRQ8 373 aa10.02□□□□□ -0.81
CNOT1-220ENST00000569916 PLEKHA2Q9HB19 425 aa10.02□□□□□ -0.81
CNOT1-220ENST00000569916 RANGRFQ9HD47 186 aaPredicted RBP10.02□□□□□ -0.81
CNOT1-220ENST00000569916 COMMD9Q9P000 198 aa10.02□□□□□ -0.81
CNOT1-220ENST00000569916 KLK11Q9UBX7 282 aa10.02□□□□□ -0.81
CNOT1-220ENST00000569916 ZMAT5Q9UDW3 170 aaKnown RBP10.02□□□□□ -0.81
CNOT1-220ENST00000569916 ANKRD34BA5PLL1 514 aa10.01□□□□□ -0.81
CNOT1-220ENST00000569916 CGB1A6NKQ9 187 aa10.01□□□□□ -0.81
CNOT1-220ENST00000569916 FAM223BA6NKX1 122 aa10.01□□□□□ -0.81
CNOT1-220ENST00000569916 M0QYG6 137 aa10.01□□□□□ -0.81
CNOT1-220ENST00000569916 CTDSP2O14595 271 aa10.01□□□□□ -0.81
CNOT1-220ENST00000569916 RGS5O15539 181 aa10.01□□□□□ -0.81
CNOT1-220ENST00000569916 HLA-GP17693 338 aa10.01□□□□□ -0.81
CNOT1-220ENST00000569916 F2RP25116 425 aa10.01□□□□□ -0.81
CNOT1-220ENST00000569916 TSPAN5P62079 268 aa10.01□□□□□ -0.81
CNOT1-220ENST00000569916 RHOGP84095 191 aa10.01□□□□□ -0.81
CNOT1-220ENST00000569916 ACSM6Q6P461 480 aa10.01□□□□□ -0.81
CNOT1-220ENST00000569916 C19orf35Q6ZS72 473 aa10.01□□□□□ -0.81
CNOT1-220ENST00000569916 ZNF429Q86V71 674 aa10.01□□□□□ -0.81
CNOT1-220ENST00000569916 FAM223AQ8IWN6 122 aa10.01□□□□□ -0.81
CNOT1-220ENST00000569916 CMTM1Q8IZ96 169 aa10.01□□□□□ -0.81
CNOT1-220ENST00000569916 FYTTD1Q96QD9 318 aaKnown RBP10.01□□□□□ -0.81
CNOT1-220ENST00000569916 RSRP1Q9BUV0 290 aa10.01□□□□□ -0.81
CNOT1-220ENST00000569916 HRASLSQ9HDD0 168 aa10.01□□□□□ -0.81
CNOT1-220ENST00000569916 AKIP1Q9NQ31 210 aa10.01□□□□□ -0.81
CNOT1-220ENST00000569916 SLC2A9Q9NRM0 540 aa10.01□□□□□ -0.81
CNOT1-220ENST00000569916 TMEM140Q9NV12 185 aa10.01□□□□□ -0.81
CNOT1-220ENST00000569916 CCDC59Q9P031 241 aaKnown RBP10.01□□□□□ -0.81
CNOT1-220ENST00000569916 ZNF257Q9Y2Q1 563 aa10.01□□□□□ -0.81
CNOT1-220ENST00000569916 TRAV3A0A0B4J244 114 aa10□□□□□ -0.81
CNOT1-220ENST00000569916 NPIPB5A8MRT5 1133 aa10□□□□□ -0.81
CNOT1-220ENST00000569916 UPK2O00526 184 aa10□□□□□ -0.81
CNOT1-220ENST00000569916 SAP30O75446 220 aa10□□□□□ -0.81
CNOT1-220ENST00000569916 TRBV12-3P01733 135 aa10□□□□□ -0.81
CNOT1-220ENST00000569916 AREGP15514 252 aa10□□□□□ -0.81
CNOT1-220ENST00000569916 ZP3P21754 424 aa10□□□□□ -0.81
CNOT1-220ENST00000569916 ECI1P42126 302 aa10□□□□□ -0.81
CNOT1-220ENST00000569916 UCP3P55916 312 aa10□□□□□ -0.81
CNOT1-220ENST00000569916 ZNF585BQ52M93 769 aa10□□□□□ -0.81
CNOT1-220ENST00000569916 PHLDA2Q53GA4 152 aa10□□□□□ -0.81
CNOT1-220ENST00000569916 SLC25A42Q86VD7 318 aa10□□□□□ -0.81
CNOT1-220ENST00000569916 C15orf40Q8WUR7 153 aa10□□□□□ -0.81
CNOT1-220ENST00000569916 FCAMRQ8WWV6 532 aa10□□□□□ -0.81
CNOT1-220ENST00000569916 DGCR14Q96DF8 476 aaKnown RBP10□□□□□ -0.81
CNOT1-220ENST00000569916 PRR25Q96S07 402 aa10□□□□□ -0.81
CNOT1-220ENST00000569916 MTFP1Q9UDX5 166 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms