RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 IGLV2-14P01704 120 aa8.98□□□□□ -0.97
CAPN3-220ENST00000569827 HIST1H1DP16402 221 aaKnown RBP8.98□□□□□ -0.97
CAPN3-220ENST00000569827 CRHBPP24387 322 aa8.98□□□□□ -0.97
CAPN3-220ENST00000569827 MAP2K4P45985 399 aa8.98□□□□□ -0.97
CAPN3-220ENST00000569827 TPBGQ13641 420 aa8.98□□□□□ -0.97
CAPN3-220ENST00000569827 ZNF585BQ52M93 769 aa8.98□□□□□ -0.97
CAPN3-220ENST00000569827 OR51E2Q9H255 320 aa8.98□□□□□ -0.97
CAPN3-220ENST00000569827 RAB22AQ9UL26 194 aa8.98□□□□□ -0.97
CAPN3-220ENST00000569827 SPATA2Q9UM82 520 aa8.98□□□□□ -0.97
CAPN3-220ENST00000569827 FAT2Q9NYQ8 4349 aa8.98□□□□□ -0.97
CAPN3-220ENST00000569827 PKHD1P08F94 4074 aa8.97□□□□□ -0.97
CAPN3-220ENST00000569827 NUPR2A6NF83 97 aa8.97□□□□□ -0.97
CAPN3-220ENST00000569827 ARL6IP5O75915 188 aa8.97□□□□□ -0.97
CAPN3-220ENST00000569827 KBTBD11O94819 623 aa8.97□□□□□ -0.97
CAPN3-220ENST00000569827 RPL35AP18077 110 aaKnown RBP8.97□□□□□ -0.97
CAPN3-220ENST00000569827 GPR183P32249 361 aa8.97□□□□□ -0.97
CAPN3-220ENST00000569827 BRWD1-AS2P59051 145 aa8.97□□□□□ -0.97
CAPN3-220ENST00000569827 TNFRSF9Q07011 255 aa8.97□□□□□ -0.97
CAPN3-220ENST00000569827 OGFRL1Q5TC84 451 aaPredicted RBP8.97□□□□□ -0.97
CAPN3-220ENST00000569827 CEMP1Q6PRD7 247 aaPredicted RBP8.97□□□□□ -0.97
CAPN3-220ENST00000569827 GPHB5Q86YW7 130 aa8.97□□□□□ -0.97
CAPN3-220ENST00000569827 ZNF645Q8N7E2 425 aa8.97□□□□□ -0.97
CAPN3-220ENST00000569827 OR1L6Q8NGR2 347 aa8.97□□□□□ -0.97
CAPN3-220ENST00000569827 TCTEX1D2Q8WW35 142 aa8.97□□□□□ -0.97
CAPN3-220ENST00000569827 TAS2R8Q9NYW2 309 aa8.97□□□□□ -0.97
CAPN3-220ENST00000569827 RBMX2Q9Y388 322 aaKnown RBP8.97□□□□□ -0.97
CAPN3-220ENST00000569827 DNAH2Q9P225 4427 aa8.97□□□□□ -0.97
CAPN3-220ENST00000569827 KIAA1109Q2LD37 5005 aa8.97□□□□□ -0.97
CAPN3-220ENST00000569827 IGHV3OR16-8A0A075B7F1 116 aa8.96□□□□□ -0.98
CAPN3-220ENST00000569827 CGB1A6NKQ9 187 aa8.96□□□□□ -0.98
CAPN3-220ENST00000569827 NPIPB5A8MRT5 1133 aa8.96□□□□□ -0.98
CAPN3-220ENST00000569827 A8MWP6 167 aa8.96□□□□□ -0.98
CAPN3-220ENST00000569827 TNFSF12O43508 249 aa8.96□□□□□ -0.98
CAPN3-220ENST00000569827 SPRY2O43597 315 aa8.96□□□□□ -0.98
CAPN3-220ENST00000569827 CREBL2O60519 120 aaPredicted RBP8.96□□□□□ -0.98
CAPN3-220ENST00000569827 ZNF735P0CB33 412 aa8.96□□□□□ -0.98
CAPN3-220ENST00000569827 RPA2P15927 270 aa8.96□□□□□ -0.98
CAPN3-220ENST00000569827 GADD45AP24522 165 aa8.96□□□□□ -0.98
CAPN3-220ENST00000569827 TALDO1P37837 337 aa8.96□□□□□ -0.98
CAPN3-220ENST00000569827 SLC25A42Q86VD7 318 aa8.96□□□□□ -0.98
CAPN3-220ENST00000569827 NUDCD2Q8WVJ2 157 aa8.96□□□□□ -0.98
CAPN3-220ENST00000569827 EEF1AKMT3Q96AZ1 226 aa8.96□□□□□ -0.98
CAPN3-220ENST00000569827 CCDC90BQ9GZT6 254 aa8.96□□□□□ -0.98
CAPN3-220ENST00000569827 C8orf4Q9NR00 106 aa8.96□□□□□ -0.98
CAPN3-220ENST00000569827 MRPS7Q9Y2R9 242 aaKnown RBP8.96□□□□□ -0.98
CAPN3-220ENST00000569827 DYNC1H1Q14204 4646 aaKnown RBP8.95□□□□□ -0.98
CAPN3-220ENST00000569827 TRAV3A0A0B4J244 114 aa8.95□□□□□ -0.98
CAPN3-220ENST00000569827 ZNF207O43670 478 aaKnown RBP8.95□□□□□ -0.98
CAPN3-220ENST00000569827 CLEC3BP05452 202 aa8.95□□□□□ -0.98
CAPN3-220ENST00000569827 PTHLHP12272 177 aa8.95□□□□□ -0.98
CAPN3-220ENST00000569827 PSMB6P28072 239 aa8.95□□□□□ -0.98
CAPN3-220ENST00000569827 FCGR2BP31994 310 aaPredicted RBP8.95□□□□□ -0.98
CAPN3-220ENST00000569827 MLLT11Q13015 90 aaPredicted RBP8.95□□□□□ -0.98
CAPN3-220ENST00000569827 ZNF124Q15973 351 aa8.95□□□□□ -0.98
CAPN3-220ENST00000569827 FAM106AQ4KMX7 169 aa8.95□□□□□ -0.98
CAPN3-220ENST00000569827 FAM209BQ5JX69 171 aa8.95□□□□□ -0.98
CAPN3-220ENST00000569827 RBPMS2Q6ZRY4 209 aaKnown RBP8.95□□□□□ -0.98
CAPN3-220ENST00000569827 PUSL1Q8N0Z8 303 aaKnown RBP8.95□□□□□ -0.98
CAPN3-220ENST00000569827 TMEM167AQ8TBQ9 72 aa8.95□□□□□ -0.98
CAPN3-220ENST00000569827 OR2A7Q96R45 310 aa8.95□□□□□ -0.98
CAPN3-220ENST00000569827 ATG5Q9H1Y0 275 aa8.95□□□□□ -0.98
CAPN3-220ENST00000569827 SLC2A9Q9NRM0 540 aa8.95□□□□□ -0.98
CAPN3-220ENST00000569827 SCN3BQ9NY72 215 aa8.95□□□□□ -0.98
CAPN3-220ENST00000569827 PRELID3BQ9Y3B1 194 aa8.95□□□□□ -0.98
CAPN3-220ENST00000569827 OR2W1Q9Y3N9 320 aa8.95□□□□□ -0.98
CAPN3-220ENST00000569827 IGLV11-55A0A075B6I3 123 aa8.94□□□□□ -0.98
CAPN3-220ENST00000569827 IGHV3-21A0A0B4J1V1 117 aa8.94□□□□□ -0.98
CAPN3-220ENST00000569827 FCER2P06734 321 aa8.94□□□□□ -0.98
CAPN3-220ENST00000569827 DEFA4P12838 97 aa8.94□□□□□ -0.98
CAPN3-220ENST00000569827 CD36P16671 472 aa8.94□□□□□ -0.98
CAPN3-220ENST00000569827 CTRB1P17538 263 aa8.94□□□□□ -0.98
CAPN3-220ENST00000569827 PSMD7P51665 324 aa8.94□□□□□ -0.98
CAPN3-220ENST00000569827 SSX1Q16384 188 aa8.94□□□□□ -0.98
CAPN3-220ENST00000569827 ODF3L2Q3SX64 289 aa8.94□□□□□ -0.98
CAPN3-220ENST00000569827 CTRB2Q6GPI1 263 aa8.94□□□□□ -0.98
CAPN3-220ENST00000569827 NR2C2APQ86WQ0 139 aa8.94□□□□□ -0.98
CAPN3-220ENST00000569827 OR5B3Q8NH48 314 aa8.94□□□□□ -0.98
CAPN3-220ENST00000569827 OR4S2Q8NH73 311 aa8.94□□□□□ -0.98
CAPN3-220ENST00000569827 RYR1P21817 5038 aa8.94□□□□□ -0.98
CAPN3-220ENST00000569827 DNAH17Q9UFH2 4485 aa8.93□□□□□ -0.98
CAPN3-220ENST00000569827 MUC4Q99102 2169 aa8.93□□□□□ -0.98
CAPN3-220ENST00000569827 TMEM235A6NFC5 223 aa8.93□□□□□ -0.98
CAPN3-220ENST00000569827 IFITM5A6NNB3 132 aa8.93□□□□□ -0.98
CAPN3-220ENST00000569827 EBAG9O00559 213 aa8.93□□□□□ -0.98
CAPN3-220ENST00000569827 CASQ2O14958 399 aaPredicted RBP8.93□□□□□ -0.98
CAPN3-220ENST00000569827 RGS10O43665 173 aa8.93□□□□□ -0.98
CAPN3-220ENST00000569827 DIRAS3O95661 229 aa8.93□□□□□ -0.98
CAPN3-220ENST00000569827 HLA-DQB1P01920 261 aa8.93□□□□□ -0.98
CAPN3-220ENST00000569827 CRYGCP07315 174 aa8.93□□□□□ -0.98
CAPN3-220ENST00000569827 BMI1P35226 326 aa8.93□□□□□ -0.98
CAPN3-220ENST00000569827 AQP4P55087 323 aa8.93□□□□□ -0.98
CAPN3-220ENST00000569827 RPL8P62917 257 aaKnown RBP8.93□□□□□ -0.98
CAPN3-220ENST00000569827 EIF4EBP1Q13541 118 aaPredicted RBP8.93□□□□□ -0.98
CAPN3-220ENST00000569827 TRAM1Q15629 374 aa8.93□□□□□ -0.98
CAPN3-220ENST00000569827 ANKRD55Q3KP44 614 aa8.93□□□□□ -0.98
CAPN3-220ENST00000569827 OR4A47Q6IF82 309 aa8.93□□□□□ -0.98
CAPN3-220ENST00000569827 OR2C3Q8N628 320 aa8.93□□□□□ -0.98
CAPN3-220ENST00000569827 PHLDA1Q8WV24 401 aaPredicted RBP8.93□□□□□ -0.98
CAPN3-220ENST00000569827 MGLLQ99685 303 aa8.93□□□□□ -0.98
CAPN3-220ENST00000569827 PCLOQ9Y6V0 5065 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms