RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 GPHA2Q96T91 129 aa10.53□□□□□ -0.72
GTF3C1-211ENST00000569653 COA4Q9NYJ1 87 aa10.53□□□□□ -0.72
GTF3C1-211ENST00000569653 SMIM31A0A1B0GVY4 71 aa10.52□□□□□ -0.73
GTF3C1-211ENST00000569653 E7EUB6 86 aa10.52□□□□□ -0.73
GTF3C1-211ENST00000569653 BMPR1BO00238 502 aa10.52□□□□□ -0.73
GTF3C1-211ENST00000569653 TUSC2O75896 110 aa10.52□□□□□ -0.73
GTF3C1-211ENST00000569653 PTHLHP12272 177 aa10.52□□□□□ -0.73
GTF3C1-211ENST00000569653 ZP3P21754 424 aa10.52□□□□□ -0.73
GTF3C1-211ENST00000569653 MECP2P51608 486 aaKnown RBP10.52□□□□□ -0.73
GTF3C1-211ENST00000569653 TNXAQ16473 311 aa10.52□□□□□ -0.73
GTF3C1-211ENST00000569653 OR2B11Q5JQS5 317 aa10.52□□□□□ -0.73
GTF3C1-211ENST00000569653 VKORC1L1Q8N0U8 176 aa10.52□□□□□ -0.73
GTF3C1-211ENST00000569653 SNAPC3Q92966 411 aa10.52□□□□□ -0.73
GTF3C1-211ENST00000569653 AKIP1Q9NQ31 210 aa10.52□□□□□ -0.73
GTF3C1-211ENST00000569653 PEF1Q9UBV8 284 aaKnown RBP10.52□□□□□ -0.73
GTF3C1-211ENST00000569653 DMRT1Q9Y5R6 373 aa10.52□□□□□ -0.73
GTF3C1-211ENST00000569653 PLECQ15149 4684 aaKnown RBP10.51□□□□□ -0.73
GTF3C1-211ENST00000569653 TRBV9A0A0B4J1U6 114 aa10.51□□□□□ -0.73
GTF3C1-211ENST00000569653 A0A0G2JLM5 398 aa10.51□□□□□ -0.73
GTF3C1-211ENST00000569653 DPPA5A6NC42 116 aa10.51□□□□□ -0.73
GTF3C1-211ENST00000569653 MEIS3P1A6NDR6 274 aa10.51□□□□□ -0.73
GTF3C1-211ENST00000569653 A8MZ25 164 aa10.51□□□□□ -0.73
GTF3C1-211ENST00000569653 HPGDSO60760 199 aa10.51□□□□□ -0.73
GTF3C1-211ENST00000569653 FCGR3BO75015 233 aa10.51□□□□□ -0.73
GTF3C1-211ENST00000569653 OR9G9P0C7N8 305 aa10.51□□□□□ -0.73
GTF3C1-211ENST00000569653 ELK1P19419 428 aa10.51□□□□□ -0.73
GTF3C1-211ENST00000569653 CD40LGP29965 261 aa10.51□□□□□ -0.73
GTF3C1-211ENST00000569653 PRSS3P35030 304 aa10.51□□□□□ -0.73
GTF3C1-211ENST00000569653 KCTD9Q7L273 389 aa10.51□□□□□ -0.73
GTF3C1-211ENST00000569653 OR5AP2Q8NGF4 316 aa10.51□□□□□ -0.73
GTF3C1-211ENST00000569653 ELOVL1Q9BW60 279 aa10.51□□□□□ -0.73
GTF3C1-211ENST00000569653 SLIRPQ9GZT3 109 aaKnown RBP10.51□□□□□ -0.73
GTF3C1-211ENST00000569653 MIXL1Q9H2W2 232 aa10.51□□□□□ -0.73
GTF3C1-211ENST00000569653 EDA2RQ9HAV5 297 aa10.51□□□□□ -0.73
GTF3C1-211ENST00000569653 MRPS7Q9Y2R9 242 aaKnown RBP10.51□□□□□ -0.73
GTF3C1-211ENST00000569653 RBMX2Q9Y388 322 aaKnown RBP10.51□□□□□ -0.73
GTF3C1-211ENST00000569653 PRELID3BQ9Y3B1 194 aa10.51□□□□□ -0.73
GTF3C1-211ENST00000569653 EPPK1P58107 5090 aaKnown RBP10.51□□□□□ -0.73
GTF3C1-211ENST00000569653 HYDINQ4G0P3 5121 aa10.51□□□□□ -0.73
GTF3C1-211ENST00000569653 HMX3A6NHT5 357 aa10.5□□□□□ -0.73
GTF3C1-211ENST00000569653 TEX22C9J3V5 150 aa10.5□□□□□ -0.73
GTF3C1-211ENST00000569653 CTDSP2O14595 271 aa10.5□□□□□ -0.73
GTF3C1-211ENST00000569653 FCER2P06734 321 aa10.5□□□□□ -0.73
GTF3C1-211ENST00000569653 MYOD1P15172 320 aa10.5□□□□□ -0.73
GTF3C1-211ENST00000569653 AADACP22760 399 aa10.5□□□□□ -0.73
GTF3C1-211ENST00000569653 FCGR2CP31995 323 aa10.5□□□□□ -0.73
GTF3C1-211ENST00000569653 TAS2R46P59540 309 aa10.5□□□□□ -0.73
GTF3C1-211ENST00000569653 RHOGP84095 191 aa10.5□□□□□ -0.73
GTF3C1-211ENST00000569653 CDK10Q15131 360 aa10.5□□□□□ -0.73
GTF3C1-211ENST00000569653 MSMO1Q15800 293 aa10.5□□□□□ -0.73
GTF3C1-211ENST00000569653 VMA21Q3ZAQ7 101 aa10.5□□□□□ -0.73
GTF3C1-211ENST00000569653 OSR1Q8TAX0 266 aaPredicted RBP10.5□□□□□ -0.73
GTF3C1-211ENST00000569653 TMEM68Q96MH6 324 aa10.5□□□□□ -0.73
GTF3C1-211ENST00000569653 PHB2Q99623 299 aa10.5□□□□□ -0.73
GTF3C1-211ENST00000569653 HSD17B10Q99714 261 aaKnown RBP10.5□□□□□ -0.73
GTF3C1-211ENST00000569653 CCDC59Q9P031 241 aaKnown RBP10.5□□□□□ -0.73
GTF3C1-211ENST00000569653 RSL24D1Q9UHA3 163 aaKnown RBP10.5□□□□□ -0.73
GTF3C1-211ENST00000569653 ANAPC10Q9UM13 185 aa10.5□□□□□ -0.73
GTF3C1-211ENST00000569653 FAM25AB3EWG3 89 aa10.49□□□□□ -0.73
GTF3C1-211ENST00000569653 FAM25CB3EWG5 89 aa10.49□□□□□ -0.73
GTF3C1-211ENST00000569653 FAM25GB3EWG6 89 aa10.49□□□□□ -0.73
GTF3C1-211ENST00000569653 ZNF701M0R085 212 aaPredicted RBP10.49□□□□□ -0.73
GTF3C1-211ENST00000569653 NOL3O60936 208 aaKnown RBP10.49□□□□□ -0.73
GTF3C1-211ENST00000569653 PPYP01298 95 aa10.49□□□□□ -0.73
GTF3C1-211ENST00000569653 IL6RP08887 468 aaPredicted RBP10.49□□□□□ -0.73
GTF3C1-211ENST00000569653 HERV-K104P61576 105 aa10.49□□□□□ -0.73
GTF3C1-211ENST00000569653 EXOSC2Q13868 293 aaKnown RBP10.49□□□□□ -0.73
GTF3C1-211ENST00000569653 SECTM1Q8WVN6 248 aa10.49□□□□□ -0.73
GTF3C1-211ENST00000569653 USMG5Q96IX5 58 aa10.49□□□□□ -0.73
GTF3C1-211ENST00000569653 CITED4Q96RK1 184 aa10.49□□□□□ -0.73
GTF3C1-211ENST00000569653 SCPEP1Q9HB40 452 aa10.49□□□□□ -0.73
GTF3C1-211ENST00000569653 EHFQ9NZC4 300 aa10.49□□□□□ -0.73
GTF3C1-211ENST00000569653 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.48□□□□□ -0.73
GTF3C1-211ENST00000569653 CCDC160A6NGH7 325 aa10.48□□□□□ -0.73
GTF3C1-211ENST00000569653 CGB1A6NKQ9 187 aa10.48□□□□□ -0.73
GTF3C1-211ENST00000569653 CREBL2O60519 120 aaPredicted RBP10.48□□□□□ -0.73
GTF3C1-211ENST00000569653 NAT1P18440 290 aa10.48□□□□□ -0.73
GTF3C1-211ENST00000569653 HAGHQ16775 308 aa10.48□□□□□ -0.73
GTF3C1-211ENST00000569653 ZNF66Q6ZN08 573 aa10.48□□□□□ -0.73
GTF3C1-211ENST00000569653 SNX29P2Q8IUI4 249 aa10.48□□□□□ -0.73
GTF3C1-211ENST00000569653 LAX1Q8IWV1 398 aa10.48□□□□□ -0.73
GTF3C1-211ENST00000569653 PUSL1Q8N0Z8 303 aaKnown RBP10.48□□□□□ -0.73
GTF3C1-211ENST00000569653 TTC9CQ8N5M4 171 aa10.48□□□□□ -0.73
GTF3C1-211ENST00000569653 OR5H2Q8NGV7 314 aa10.48□□□□□ -0.73
GTF3C1-211ENST00000569653 OR4S2Q8NH73 311 aa10.48□□□□□ -0.73
GTF3C1-211ENST00000569653 TCTEX1D2Q8WW35 142 aa10.48□□□□□ -0.73
GTF3C1-211ENST00000569653 GIMAP1Q8WWP7 306 aa10.48□□□□□ -0.73
GTF3C1-211ENST00000569653 BORCS5Q969J3 196 aa10.48□□□□□ -0.73
GTF3C1-211ENST00000569653 DCUN1D5Q9BTE7 237 aa10.48□□□□□ -0.73
GTF3C1-211ENST00000569653 NXF2Q9GZY0 626 aaKnown RBP10.48□□□□□ -0.73
GTF3C1-211ENST00000569653 RETNQ9HD89 108 aa10.48□□□□□ -0.73
GTF3C1-211ENST00000569653 SIGLEC8Q9NYZ4 499 aa10.48□□□□□ -0.73
GTF3C1-211ENST00000569653 SELENOKQ9Y6D0 94 aa10.48□□□□□ -0.73
GTF3C1-211ENST00000569653 PPP5D1E7EU14 171 aa10.47□□□□□ -0.73
GTF3C1-211ENST00000569653 OR2J3O76001 311 aa10.47□□□□□ -0.73
GTF3C1-211ENST00000569653 OR2A4O95047 310 aa10.47□□□□□ -0.73
GTF3C1-211ENST00000569653 HLA-AP01891 365 aaKnown RBP10.47□□□□□ -0.73
GTF3C1-211ENST00000569653 AREGP15514 252 aa10.47□□□□□ -0.73
GTF3C1-211ENST00000569653 KIR2DS2P43631 304 aa10.47□□□□□ -0.73
GTF3C1-211ENST00000569653 FXYD4P59646 89 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms