RNA–Protein interactions for RNA: ENST00000569476.2

LINC00559-201, long intergenic non-protein coding RNA 559, humanhuman

TSL 1 (best) BASIC

Gene LINC00559, Length 3,867 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00559-201ENST00000569476 RND1Q92730 232 aa6.47□□□□□ -1.37
LINC00559-201ENST00000569476 RAB24Q969Q5 203 aa6.47□□□□□ -1.37
LINC00559-201ENST00000569476 VSIRQ9H7M9 311 aa6.47□□□□□ -1.37
LINC00559-201ENST00000569476 PLEKHA3Q9HB20 300 aa6.47□□□□□ -1.37
LINC00559-201ENST00000569476 SLC35D1Q9NTN3 355 aa6.47□□□□□ -1.37
LINC00559-201ENST00000569476 OR51B2Q9Y5P1 312 aa6.47□□□□□ -1.37
LINC00559-201ENST00000569476 FREM1Q5H8C1 2179 aa6.47□□□□□ -1.37
LINC00559-201ENST00000569476 IGHV3-43A0A0B4J1X8 118 aa6.46□□□□□ -1.37
LINC00559-201ENST00000569476 NXPH3O95157 252 aa6.46□□□□□ -1.37
LINC00559-201ENST00000569476 IGHV3-43DP0DP04 118 aa6.46□□□□□ -1.37
LINC00559-201ENST00000569476 LGALS7P47929 136 aa6.46□□□□□ -1.37
LINC00559-201ENST00000569476 SUB1P53999 127 aaKnown RBP eCLIP6.46□□□□□ -1.37
LINC00559-201ENST00000569476 HNF4GQ14541 408 aa6.46□□□□□ -1.37
LINC00559-201ENST00000569476 ZNF383Q8NA42 475 aa6.46□□□□□ -1.37
LINC00559-201ENST00000569476 C8orf46Q8TAG6 207 aa6.46□□□□□ -1.37
LINC00559-201ENST00000569476 OR5B12Q96R08 314 aa6.46□□□□□ -1.37
LINC00559-201ENST00000569476 SMIM7Q9BQ49 75 aa6.46□□□□□ -1.37
LINC00559-201ENST00000569476 GGTLC1Q9BX51 225 aa6.46□□□□□ -1.37
LINC00559-201ENST00000569476 SHANK1Q9Y566 2161 aa6.46□□□□□ -1.38
LINC00559-201ENST00000569476 A0A1W2PPV4 95 aa6.46□□□□□ -1.38
LINC00559-201ENST00000569476 THBDP07204 575 aa6.46□□□□□ -1.38
LINC00559-201ENST00000569476 OR4A8P0C604 315 aa6.46□□□□□ -1.38
LINC00559-201ENST00000569476 APOBEC3AP31941 199 aaPredicted RBP6.46□□□□□ -1.38
LINC00559-201ENST00000569476 IZUMO4Q1ZYL8 232 aa6.46□□□□□ -1.38
LINC00559-201ENST00000569476 UHRF2Q96PU4 802 aa6.46□□□□□ -1.38
LINC00559-201ENST00000569476 SLC45A2Q9UMX9 530 aa6.46□□□□□ -1.38
LINC00559-201ENST00000569476 MSRB2Q9Y3D2 182 aa6.46□□□□□ -1.38
LINC00559-201ENST00000569476 IGHV3OR15-7A0A075B7D8 119 aa6.46□□□□□ -1.38
LINC00559-201ENST00000569476 DPRXA6NFQ7 191 aa6.46□□□□□ -1.38
LINC00559-201ENST00000569476 ZFP92A6NM28 416 aa6.46□□□□□ -1.38
LINC00559-201ENST00000569476 GGCTO75223 188 aaKnown RBP6.46□□□□□ -1.38
LINC00559-201ENST00000569476 CDX1P47902 265 aaPredicted RBP6.46□□□□□ -1.38
LINC00559-201ENST00000569476 ZNF134P52741 427 aa6.46□□□□□ -1.38
LINC00559-201ENST00000569476 DLX6P56179 175 aa6.46□□□□□ -1.38
LINC00559-201ENST00000569476 FAM3BP58499 235 aaPredicted RBP6.46□□□□□ -1.38
LINC00559-201ENST00000569476 TAS2R45P59539 299 aa6.46□□□□□ -1.38
LINC00559-201ENST00000569476 SSX7Q7RTT5 188 aa6.46□□□□□ -1.38
LINC00559-201ENST00000569476 FAM24BQ8N5W8 94 aa6.46□□□□□ -1.38
LINC00559-201ENST00000569476 Q8NA96 180 aa6.46□□□□□ -1.38
LINC00559-201ENST00000569476 TMEM106BQ9NUM4 274 aa6.46□□□□□ -1.38
LINC00559-201ENST00000569476 AMMECR1Q9Y4X0 333 aaPredicted RBP6.46□□□□□ -1.38
LINC00559-201ENST00000569476 IGKV1D-33P01593 117 aa6.45□□□□□ -1.38
LINC00559-201ENST00000569476 IGKV1-33P01594 117 aa6.45□□□□□ -1.38
LINC00559-201ENST00000569476 ELLP55199 621 aaPredicted RBP6.45□□□□□ -1.38
LINC00559-201ENST00000569476 RPL19P84098 196 aaKnown RBP6.45□□□□□ -1.38
LINC00559-201ENST00000569476 PRR20EP86478 221 aa6.45□□□□□ -1.38
LINC00559-201ENST00000569476 PRR20CP86479 221 aa6.45□□□□□ -1.38
LINC00559-201ENST00000569476 PRR20DP86480 221 aa6.45□□□□□ -1.38
LINC00559-201ENST00000569476 PRR20BP86481 221 aa6.45□□□□□ -1.38
LINC00559-201ENST00000569476 PRR20AP86496 221 aa6.45□□□□□ -1.38
LINC00559-201ENST00000569476 TLE1Q04724 770 aa6.45□□□□□ -1.38
LINC00559-201ENST00000569476 TFF3Q07654 80 aa6.45□□□□□ -1.38
LINC00559-201ENST00000569476 COA6Q5JTJ3 125 aaKnown RBP6.45□□□□□ -1.38
LINC00559-201ENST00000569476 ETFRF1Q6IPR1 90 aa6.45□□□□□ -1.38
LINC00559-201ENST00000569476 RFESDQ8TAC1 157 aa6.45□□□□□ -1.38
LINC00559-201ENST00000569476 ZDHHC16Q969W1 377 aa6.45□□□□□ -1.38
LINC00559-201ENST00000569476 ACY3Q96HD9 319 aa6.45□□□□□ -1.38
LINC00559-201ENST00000569476 FAM210BQ96KR6 192 aa6.45□□□□□ -1.38
LINC00559-201ENST00000569476 RHOVQ96L33 236 aa6.45□□□□□ -1.38
LINC00559-201ENST00000569476 TP53TG5Q9Y2B4 290 aa6.45□□□□□ -1.38
LINC00559-201ENST00000569476 PXMP4Q9Y6I8 212 aa6.45□□□□□ -1.38
LINC00559-201ENST00000569476 CT45A6P0DMU7 189 aa6.45□□□□□ -1.38
LINC00559-201ENST00000569476 CT45A5P0DMU8 189 aa6.45□□□□□ -1.38
LINC00559-201ENST00000569476 CT45A7P0DMV0 189 aa6.45□□□□□ -1.38
LINC00559-201ENST00000569476 FAM27E3Q08E93 113 aa6.45□□□□□ -1.38
LINC00559-201ENST00000569476 RPL39P5Q59GN2 51 aa6.45□□□□□ -1.38
LINC00559-201ENST00000569476 SPACA3Q8IXA5 215 aa6.45□□□□□ -1.38
LINC00559-201ENST00000569476 TEX45Q8NA69 505 aa6.45□□□□□ -1.38
LINC00559-201ENST00000569476 ZNRF1Q8ND25 227 aa6.45□□□□□ -1.38
LINC00559-201ENST00000569476 OR9G1Q8NH87 305 aa6.45□□□□□ -1.38
LINC00559-201ENST00000569476 Q8WTZ3 238 aa6.45□□□□□ -1.38
LINC00559-201ENST00000569476 ZCCHC14Q8WYQ9 949 aaKnown RBP6.45□□□□□ -1.38
LINC00559-201ENST00000569476 ABHD17AQ96GS6 310 aa6.45□□□□□ -1.38
LINC00559-201ENST00000569476 MGST2Q99735 147 aa6.45□□□□□ -1.38
LINC00559-201ENST00000569476 SAP30LQ9HAJ7 183 aa6.45□□□□□ -1.38
LINC00559-201ENST00000569476 TMEM155Q4W5P6 130 aa6.45□□□□□ -1.38
LINC00559-201ENST00000569476 IQCF2Q8IXL9 164 aa6.45□□□□□ -1.38
LINC00559-201ENST00000569476 ST6GALNAC3Q8NDV1 305 aa6.45□□□□□ -1.38
LINC00559-201ENST00000569476 RNASE6Q93091 150 aaKnown RBP6.45□□□□□ -1.38
LINC00559-201ENST00000569476 WASHC3Q9Y3C0 194 aa6.45□□□□□ -1.38
LINC00559-201ENST00000569476 DEFB108AA8MXU0 73 aa6.44□□□□□ -1.38
LINC00559-201ENST00000569476 H0YJW9 148 aa6.44□□□□□ -1.38
LINC00559-201ENST00000569476 YIF1AO95070 293 aa6.44□□□□□ -1.38
LINC00559-201ENST00000569476 PFN1P07737 140 aaKnown RBP6.44□□□□□ -1.38
LINC00559-201ENST00000569476 SELENOTP62341 195 aa6.44□□□□□ -1.38
LINC00559-201ENST00000569476 RPL23P62829 140 aaKnown RBP6.44□□□□□ -1.38
LINC00559-201ENST00000569476 ERHP84090 104 aaKnown RBP6.44□□□□□ -1.38
LINC00559-201ENST00000569476 VMA21Q3ZAQ7 101 aa6.44□□□□□ -1.38
LINC00559-201ENST00000569476 PQLC2Q6ZP29 291 aa6.44□□□□□ -1.38
LINC00559-201ENST00000569476 THAP8Q8NA92 274 aa6.44□□□□□ -1.38
LINC00559-201ENST00000569476 BEND2Q8NDZ0 799 aa6.44□□□□□ -1.38
LINC00559-201ENST00000569476 OR4C13Q8NGP0 309 aa6.44□□□□□ -1.38
LINC00559-201ENST00000569476 UBALD1Q8TB05 177 aa6.44□□□□□ -1.38
LINC00559-201ENST00000569476 CCL13Q99616 98 aa6.44□□□□□ -1.38
LINC00559-201ENST00000569476 DCTN5Q9BTE1 182 aa6.44□□□□□ -1.38
LINC00559-201ENST00000569476 ZNF318Q5VUA4 2279 aa6.44□□□□□ -1.38
LINC00559-201ENST00000569476 SHISA9B4DS77 424 aa6.44□□□□□ -1.38
LINC00559-201ENST00000569476 C11orf94C9JXX5 98 aa6.44□□□□□ -1.38
LINC00559-201ENST00000569476 CORTO00230 105 aa6.44□□□□□ -1.38
LINC00559-201ENST00000569476 SLC31A2O15432 143 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms