RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	PDGFRL	Q15198	375 aa		0.99	□□□□□ -2.25
UBR1-209	ENST00000569243	RHEB	Q15382	184 aa		0.99	□□□□□ -2.25
UBR1-209	ENST00000569243	CCDC58	Q4VC31	144 aa		0.99	□□□□□ -2.25
UBR1-209	ENST00000569243	ATP6AP1L	Q52LC2	224 aa		0.99	□□□□□ -2.25
UBR1-209	ENST00000569243	TMEM128	Q5BJH2	165 aa		0.99	□□□□□ -2.25
UBR1-209	ENST00000569243	BRMS1L	Q5PSV4	323 aa		0.99	□□□□□ -2.25
UBR1-209	ENST00000569243	MRPL2	Q5T653	305 aa	Known RBP	0.99	□□□□□ -2.25
UBR1-209	ENST00000569243	SAMD13	Q5VXD3	122 aa		0.99	□□□□□ -2.25
UBR1-209	ENST00000569243	TEX36	Q5VZQ5	186 aa		0.99	□□□□□ -2.25
UBR1-209	ENST00000569243	FAM104B	Q5XKR9	115 aa		0.99	□□□□□ -2.25
UBR1-209	ENST00000569243	LAIR2	Q6ISS4	152 aa		0.99	□□□□□ -2.25
UBR1-209	ENST00000569243	DCUN1D2	Q6PH85	259 aa		0.99	□□□□□ -2.25
UBR1-209	ENST00000569243	SBSN	Q6UWP8	590 aa		0.99	□□□□□ -2.25
UBR1-209	ENST00000569243	GOLT1A	Q6ZVE7	132 aa		0.99	□□□□□ -2.25
UBR1-209	ENST00000569243	GRINA	Q7Z429	371 aa		0.99	□□□□□ -2.25
UBR1-209	ENST00000569243	BAP18	Q8IXM2	172 aa		0.99	□□□□□ -2.25
UBR1-209	ENST00000569243	EXOC3-AS1	Q8N2X6	119 aa		0.99	□□□□□ -2.25
UBR1-209	ENST00000569243	ZNF555	Q8NEP9	628 aa		0.99	□□□□□ -2.25
UBR1-209	ENST00000569243	OR8J3	Q8NGG0	315 aa		0.99	□□□□□ -2.25
UBR1-209	ENST00000569243	OR5J2	Q8NH18	312 aa		0.99	□□□□□ -2.25
UBR1-209	ENST00000569243	OR10A6	Q8NH74	314 aa		0.99	□□□□□ -2.25
UBR1-209	ENST00000569243	OR4A5	Q8NH83	315 aa		0.99	□□□□□ -2.25
UBR1-209	ENST00000569243	SCGB1C1	Q8TD33	95 aa		0.99	□□□□□ -2.25
UBR1-209	ENST00000569243	ORAOV1	Q8WV07	137 aa		0.99	□□□□□ -2.25
UBR1-209	ENST00000569243	ZC2HC1A	Q96GY0	325 aa		0.99	□□□□□ -2.25
UBR1-209	ENST00000569243	REEP6	Q96HR9	211 aa		0.99	□□□□□ -2.25
UBR1-209	ENST00000569243	SLC35G5	Q96KT7	338 aa		0.99	□□□□□ -2.25
UBR1-209	ENST00000569243	YPEL4	Q96NS1	127 aa		0.99	□□□□□ -2.25
UBR1-209	ENST00000569243	EFCAB11	Q9BUY7	163 aa		0.99	□□□□□ -2.25
UBR1-209	ENST00000569243	TBL1XR1	Q9BZK7	514 aa		0.99	□□□□□ -2.25
UBR1-209	ENST00000569243	MAP1LC3B	Q9GZQ8	125 aa		0.99	□□□□□ -2.25
UBR1-209	ENST00000569243	MED28	Q9H204	178 aa		0.99	□□□□□ -2.25
UBR1-209	ENST00000569243	OR51I2	Q9H344	312 aa		0.99	□□□□□ -2.25
UBR1-209	ENST00000569243	ASF1B	Q9NVP2	202 aa		0.99	□□□□□ -2.25
UBR1-209	ENST00000569243	TMEM38B	Q9NVV0	291 aa		0.99	□□□□□ -2.25
UBR1-209	ENST00000569243	TMEM216	Q9P0N5	145 aa		0.99	□□□□□ -2.25
UBR1-209	ENST00000569243	RSL24D1	Q9UHA3	163 aa	Known RBP	0.99	□□□□□ -2.25
UBR1-209	ENST00000569243	LINC00527	Q9UJ94	153 aa		0.99	□□□□□ -2.25
UBR1-209	ENST00000569243	DNAJC12	Q9UKB3	198 aa		0.99	□□□□□ -2.25
UBR1-209	ENST00000569243	PRND	Q9UKY0	176 aa		0.99	□□□□□ -2.25
UBR1-209	ENST00000569243	CYSLTR1	Q9Y271	337 aa		0.99	□□□□□ -2.25
UBR1-209	ENST00000569243	OR51B4	Q9Y5P0	310 aa		0.99	□□□□□ -2.25
UBR1-209	ENST00000569243	SCN10A	Q9Y5Y9	1956 aa		0.99	□□□□□ -2.25
UBR1-209	ENST00000569243	RPRD2	Q5VT52	1461 aa	Known RBP	0.99	□□□□□ -2.25
UBR1-209	ENST00000569243	NPAT	Q14207	1427 aa		0.98	□□□□□ -2.25
UBR1-209	ENST00000569243	SETD5	Q9C0A6	1442 aa		0.98	□□□□□ -2.25
UBR1-209	ENST00000569243	ATG2B	Q96BY7	2078 aa		0.98	□□□□□ -2.25
UBR1-209	ENST00000569243	MYH3	P11055	1940 aa		0.98	□□□□□ -2.25
UBR1-209	ENST00000569243	hCG_1818297	A0A087WSY0	165 aa		0.98	□□□□□ -2.25
UBR1-209	ENST00000569243	TRAV8-1	A0A0A6YYK1	113 aa		0.98	□□□□□ -2.25
UBR1-209	ENST00000569243	IGKV1-12	A0A0C4DH73	117 aa		0.98	□□□□□ -2.25
UBR1-209	ENST00000569243	TMEM72	A0PK05	275 aa		0.98	□□□□□ -2.25
UBR1-209	ENST00000569243		A8MT66	165 aa		0.98	□□□□□ -2.25
UBR1-209	ENST00000569243		A8MUN3	132 aa		0.98	□□□□□ -2.25
UBR1-209	ENST00000569243	TMEM250	H0YL14	139 aa		0.98	□□□□□ -2.25
UBR1-209	ENST00000569243	LST1	O00453	97 aa		0.98	□□□□□ -2.25
UBR1-209	ENST00000569243	KPNA4	O00629	521 aa	Predicted RBP	0.98	□□□□□ -2.25
UBR1-209	ENST00000569243	BANF1	O75531	89 aa		0.98	□□□□□ -2.25
UBR1-209	ENST00000569243	IGKV1D-12	P01611	117 aa		0.98	□□□□□ -2.25
UBR1-209	ENST00000569243	HLA-DRB1	P01911	266 aa		0.98	□□□□□ -2.25
UBR1-209	ENST00000569243	C1QB	P02746	253 aa		0.98	□□□□□ -2.25
UBR1-209	ENST00000569243	OPN1SW	P03999	348 aa		0.98	□□□□□ -2.25
UBR1-209	ENST00000569243	CSN2	P05814	226 aa		0.98	□□□□□ -2.25
UBR1-209	ENST00000569243	OR10J4	P0C629	311 aa		0.98	□□□□□ -2.25
UBR1-209	ENST00000569243	CTSE	P14091	401 aa		0.98	□□□□□ -2.25
UBR1-209	ENST00000569243	RPL7	P18124	248 aa	Known RBP	0.98	□□□□□ -2.25
UBR1-209	ENST00000569243	ERP29	P30040	261 aa	Known RBP	0.98	□□□□□ -2.25
UBR1-209	ENST00000569243	OR10J1	P30954	320 aa		0.98	□□□□□ -2.25
UBR1-209	ENST00000569243	PHB	P35232	272 aa		0.98	□□□□□ -2.25
UBR1-209	ENST00000569243	PPP1CC	P36873	323 aa	Known RBP	0.98	□□□□□ -2.25
UBR1-209	ENST00000569243	AKR1C3	P42330	323 aa		0.98	□□□□□ -2.25
UBR1-209	ENST00000569243	GABRA4	P48169	554 aa		0.98	□□□□□ -2.25
UBR1-209	ENST00000569243	ATP5G3	P48201	142 aa		0.98	□□□□□ -2.25
UBR1-209	ENST00000569243	EMP1	P54849	157 aa		0.98	□□□□□ -2.25
UBR1-209	ENST00000569243	C1QTNF8	P60827	252 aa		0.98	□□□□□ -2.25
UBR1-209	ENST00000569243	CKS1B	P61024	79 aa		0.98	□□□□□ -2.25
UBR1-209	ENST00000569243	HSPE1	P61604	102 aa	Known RBP	0.98	□□□□□ -2.25
UBR1-209	ENST00000569243	SNRPD2	P62316	118 aa	Known RBP	0.98	□□□□□ -2.25
UBR1-209	ENST00000569243	BSPH1	Q075Z2	132 aa		0.98	□□□□□ -2.25
UBR1-209	ENST00000569243	FABP9	Q0Z7S8	132 aa		0.98	□□□□□ -2.25
UBR1-209	ENST00000569243	DHRS2	Q13268	280 aa		0.98	□□□□□ -2.25
UBR1-209	ENST00000569243	LTC4S	Q16873	150 aa		0.98	□□□□□ -2.25
UBR1-209	ENST00000569243	C12orf74	Q32Q52	190 aa		0.98	□□□□□ -2.25
UBR1-209	ENST00000569243	TMEM78	Q5T7P6	136 aa		0.98	□□□□□ -2.25
UBR1-209	ENST00000569243	HRCT1	Q6UXD1	115 aa		0.98	□□□□□ -2.25
UBR1-209	ENST00000569243	OOSP2	Q86WS3	158 aa		0.98	□□□□□ -2.25
UBR1-209	ENST00000569243	FAM24B	Q8N5W8	94 aa		0.98	□□□□□ -2.25
UBR1-209	ENST00000569243	SLC25A29	Q8N8R3	303 aa		0.98	□□□□□ -2.25
UBR1-209	ENST00000569243	ZDHHC22	Q8N966	263 aa		0.98	□□□□□ -2.25
UBR1-209	ENST00000569243	GDPD1	Q8N9F7	314 aa		0.98	□□□□□ -2.25
UBR1-209	ENST00000569243	ZNF439	Q8NDP4	499 aa		0.98	□□□□□ -2.25
UBR1-209	ENST00000569243	OR11G2	Q8NGC1	345 aa		0.98	□□□□□ -2.25
UBR1-209	ENST00000569243	OR5K1	Q8NHB7	308 aa		0.98	□□□□□ -2.25
UBR1-209	ENST00000569243	RNASE11	Q8TAA1	199 aa	Known RBP	0.98	□□□□□ -2.25
UBR1-209	ENST00000569243	JOSD2	Q8TAC2	188 aa		0.98	□□□□□ -2.25
UBR1-209	ENST00000569243	SLC25A40	Q8TBP6	338 aa		0.98	□□□□□ -2.25
UBR1-209	ENST00000569243	CD200R1	Q8TD46	325 aa		0.98	□□□□□ -2.25
UBR1-209	ENST00000569243	C2orf15	Q8WU43	125 aa	Known RBP	0.98	□□□□□ -2.25
UBR1-209	ENST00000569243	C11orf40	Q8WZ69	217 aa		0.98	□□□□□ -2.25
UBR1-209	ENST00000569243	BORCS7	Q96B45	105 aa		0.98	□□□□□ -2.25

Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms