RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 SPAG16Q8N0X2 631 aa22.54■■□□□ 1.2
RAB40C-211ENST00000568586 MOB3AQ96BX8 217 aa22.54■■□□□ 1.2
RAB40C-211ENST00000568586 SCPEP1Q9HB40 452 aa22.54■■□□□ 1.2
RAB40C-211ENST00000568586 BET1LQ9NYM9 111 aa22.54■■□□□ 1.2
RAB40C-211ENST00000568586 FAM223BA6NKX1 122 aa22.53■■□□□ 1.2
RAB40C-211ENST00000568586 MPPED1O15442 326 aa22.53■■□□□ 1.2
RAB40C-211ENST00000568586 IL6RP08887 468 aaPredicted RBP22.53■■□□□ 1.2
RAB40C-211ENST00000568586 ZNF45Q02386 682 aa22.53■■□□□ 1.2
RAB40C-211ENST00000568586 CATR1Q13166 79 aa22.53■■□□□ 1.2
RAB40C-211ENST00000568586 SLC25A42Q86VD7 318 aa22.53■■□□□ 1.2
RAB40C-211ENST00000568586 FAM223AQ8IWN6 122 aa22.53■■□□□ 1.2
RAB40C-211ENST00000568586 OR4A5Q8NH83 315 aa22.53■■□□□ 1.2
RAB40C-211ENST00000568586 PEF1Q9UBV8 284 aaKnown RBP22.53■■□□□ 1.2
RAB40C-211ENST00000568586 SMIM31A0A1B0GVY4 71 aa22.52■■□□□ 1.2
RAB40C-211ENST00000568586 E7EUB6 86 aa22.52■■□□□ 1.2
RAB40C-211ENST00000568586 SULT1C2O00338 296 aa22.52■■□□□ 1.2
RAB40C-211ENST00000568586 ZNF735P0CB33 412 aa22.52■■□□□ 1.2
RAB40C-211ENST00000568586 TAS2R31P59538 309 aa22.52■■□□□ 1.2
RAB40C-211ENST00000568586 HERV-K104P61576 105 aa22.52■■□□□ 1.2
RAB40C-211ENST00000568586 CD69Q07108 199 aa22.52■■□□□ 1.2
RAB40C-211ENST00000568586 KLK9Q2XQG4 91 aa22.52■■□□□ 1.2
RAB40C-211ENST00000568586 TMEM17Q86X19 198 aa22.52■■□□□ 1.2
RAB40C-211ENST00000568586 CD300LFQ8TDQ1 290 aa22.52■■□□□ 1.2
RAB40C-211ENST00000568586 NAA50Q9GZZ1 169 aaKnown RBP22.52■■□□□ 1.2
RAB40C-211ENST00000568586 AKIP1Q9NQ31 210 aa22.52■■□□□ 1.2
RAB40C-211ENST00000568586 KLK9Q9UKQ9 250 aa22.52■■□□□ 1.2
RAB40C-211ENST00000568586 A0A1B0GW64 132 aa22.51■■□□□ 1.19
RAB40C-211ENST00000568586 HPRT1P00492 218 aa22.51■■□□□ 1.19
RAB40C-211ENST00000568586 FGF2P09038 288 aa22.51■■□□□ 1.19
RAB40C-211ENST00000568586 ELK1P19419 428 aa22.51■■□□□ 1.19
RAB40C-211ENST00000568586 RHOGP84095 191 aa22.51■■□□□ 1.19
RAB40C-211ENST00000568586 OR5H2Q8NGV7 314 aa22.51■■□□□ 1.19
RAB40C-211ENST00000568586 ZNF2Q9BSG1 426 aaPredicted RBP22.51■■□□□ 1.19
RAB40C-211ENST00000568586 PLEKHA2Q9HB19 425 aa22.51■■□□□ 1.19
RAB40C-211ENST00000568586 SLC2A9Q9NRM0 540 aa22.51■■□□□ 1.19
RAB40C-211ENST00000568586 ZNF257Q9Y2Q1 563 aa22.51■■□□□ 1.19
RAB40C-211ENST00000568586 ANKRD34BA5PLL1 514 aa22.5■■□□□ 1.19
RAB40C-211ENST00000568586 NPIPB5A8MRT5 1133 aa22.5■■□□□ 1.19
RAB40C-211ENST00000568586 PMP2P02689 132 aa22.5■■□□□ 1.19
RAB40C-211ENST00000568586 RPL27AP46776 148 aaKnown RBP22.5■■□□□ 1.19
RAB40C-211ENST00000568586 RPL8P62917 257 aaKnown RBP22.5■■□□□ 1.19
RAB40C-211ENST00000568586 DEFA5Q01523 94 aa22.5■■□□□ 1.19
RAB40C-211ENST00000568586 OR4A47Q6IF82 309 aa22.5■■□□□ 1.19
RAB40C-211ENST00000568586 NECAP1Q8NC96 275 aa22.5■■□□□ 1.19
RAB40C-211ENST00000568586 OR6Q1Q8NGQ2 317 aa22.5■■□□□ 1.19
RAB40C-211ENST00000568586 OR4C12Q96R67 309 aa22.5■■□□□ 1.19
RAB40C-211ENST00000568586 ELOVL1Q9BW60 279 aa22.5■■□□□ 1.19
RAB40C-211ENST00000568586 HPGDSO60760 199 aa22.49■■□□□ 1.19
RAB40C-211ENST00000568586 CRYGCP07315 174 aa22.49■■□□□ 1.19
RAB40C-211ENST00000568586 ALDH3B2P48448 385 aa22.49■■□□□ 1.19
RAB40C-211ENST00000568586 HMX3A6NHT5 357 aa22.48■■□□□ 1.19
RAB40C-211ENST00000568586 TRBV12-3P01733 135 aa22.48■■□□□ 1.19
RAB40C-211ENST00000568586 PRH1P02810 166 aa22.48■■□□□ 1.19
RAB40C-211ENST00000568586 NQO2P16083 231 aa22.48■■□□□ 1.19
RAB40C-211ENST00000568586 SPNP16150 400 aa22.48■■□□□ 1.19
RAB40C-211ENST00000568586 HLA-GP17693 338 aa22.48■■□□□ 1.19
RAB40C-211ENST00000568586 VAX1Q5SQQ9 334 aa22.48■■□□□ 1.19
RAB40C-211ENST00000568586 IL34Q6ZMJ4 242 aa22.48■■□□□ 1.19
RAB40C-211ENST00000568586 SSX9Q7RTT3 188 aa22.48■■□□□ 1.19
RAB40C-211ENST00000568586 CADM3Q8N126 398 aa22.48■■□□□ 1.19
RAB40C-211ENST00000568586 OR6F1Q8NGZ6 308 aa22.48■■□□□ 1.19
RAB40C-211ENST00000568586 MRPS26Q9BYN8 205 aaKnown RBP22.48■■□□□ 1.19
RAB40C-211ENST00000568586 TENM3Q9P273 2699 aa22.47■■□□□ 1.19
RAB40C-211ENST00000568586 PGLYRP1O75594 196 aaPredicted RBP22.47■■□□□ 1.19
RAB40C-211ENST00000568586 IGLV1-51P01701 117 aa22.47■■□□□ 1.19
RAB40C-211ENST00000568586 NHLRC4P0CG21 123 aaPredicted RBP22.47■■□□□ 1.19
RAB40C-211ENST00000568586 ZNF182P17025 639 aaPredicted RBP22.47■■□□□ 1.19
RAB40C-211ENST00000568586 HRH1P35367 487 aa22.47■■□□□ 1.19
RAB40C-211ENST00000568586 ATP5G2Q06055 141 aa22.47■■□□□ 1.19
RAB40C-211ENST00000568586 MZT2AQ6P582 158 aa22.47■■□□□ 1.19
RAB40C-211ENST00000568586 AP3S1Q92572 193 aa22.47■■□□□ 1.19
RAB40C-211ENST00000568586 COMMD9Q9P000 198 aa22.47■■□□□ 1.19
RAB40C-211ENST00000568586 CGB1A6NKQ9 187 aa22.46■■□□□ 1.19
RAB40C-211ENST00000568586 TPPPO94811 219 aa22.46■■□□□ 1.19
RAB40C-211ENST00000568586 HLA-DMAP28067 261 aa22.46■■□□□ 1.19
RAB40C-211ENST00000568586 FAM209BQ5JX69 171 aa22.46■■□□□ 1.19
RAB40C-211ENST00000568586 AADACL3Q5VUY0 350 aa22.46■■□□□ 1.19
RAB40C-211ENST00000568586 GPR107Q5VW38 600 aa22.46■■□□□ 1.19
RAB40C-211ENST00000568586 C11orf87Q6NUJ2 197 aa22.46■■□□□ 1.19
RAB40C-211ENST00000568586 OR9G4Q8NGQ1 327 aa22.46■■□□□ 1.19
RAB40C-211ENST00000568586 OR51H1Q8NH63 302 aa22.46■■□□□ 1.19
RAB40C-211ENST00000568586 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP22.45■■□□□ 1.18
RAB40C-211ENST00000568586 UPK2O00526 184 aa22.45■■□□□ 1.18
RAB40C-211ENST00000568586 F2RP25116 425 aa22.45■■□□□ 1.18
RAB40C-211ENST00000568586 RCVRNP35243 200 aa22.45■■□□□ 1.18
RAB40C-211ENST00000568586 SNX29P2Q8IUI4 249 aa22.45■■□□□ 1.18
RAB40C-211ENST00000568586 FANCD2OSQ96PS1 177 aa22.45■■□□□ 1.18
RAB40C-211ENST00000568586 FYTTD1Q96QD9 318 aaKnown RBP22.45■■□□□ 1.18
RAB40C-211ENST00000568586 FXYD6Q9H0Q3 95 aa22.45■■□□□ 1.18
RAB40C-211ENST00000568586 SIGLEC8Q9NYZ4 499 aa22.45■■□□□ 1.18
RAB40C-211ENST00000568586 LY86O95711 162 aa22.44■■□□□ 1.18
RAB40C-211ENST00000568586 GP9P14770 177 aa22.44■■□□□ 1.18
RAB40C-211ENST00000568586 CTRB1P17538 263 aa22.44■■□□□ 1.18
RAB40C-211ENST00000568586 PSMB6P28072 239 aa22.44■■□□□ 1.18
RAB40C-211ENST00000568586 OR2B8PP59922 312 aa22.44■■□□□ 1.18
RAB40C-211ENST00000568586 EXOSC2Q13868 293 aaKnown RBP22.44■■□□□ 1.18
RAB40C-211ENST00000568586 CTRB2Q6GPI1 263 aa22.44■■□□□ 1.18
RAB40C-211ENST00000568586 CMTM1Q8IZ96 169 aa22.44■■□□□ 1.18
RAB40C-211ENST00000568586 DMRT1Q9Y5R6 373 aa22.44■■□□□ 1.18
RAB40C-211ENST00000568586 SMAD5-AS1Q9Y6J3 95 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms