RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 PXMP4Q9Y6I8 212 aa7.46□□□□□ -1.21
HDGFL3-206ENST00000568294 PCNX2A6NKB5 2137 aa7.46□□□□□ -1.21
HDGFL3-206ENST00000568294 YLPM1P49750 1951 aaKnown RBP7.46□□□□□ -1.21
HDGFL3-206ENST00000568294 MED13LQ71F56 2210 aa7.46□□□□□ -1.21
HDGFL3-206ENST00000568294 TRAV34A0A0B4J273 112 aa7.46□□□□□ -1.22
HDGFL3-206ENST00000568294 F2Z2F3 143 aa7.46□□□□□ -1.22
HDGFL3-206ENST00000568294 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.46□□□□□ -1.22
HDGFL3-206ENST00000568294 OR7C2O60412 319 aa7.46□□□□□ -1.22
HDGFL3-206ENST00000568294 CECR9P0C854 216 aa7.46□□□□□ -1.22
HDGFL3-206ENST00000568294 CNN1P51911 297 aaKnown RBP7.46□□□□□ -1.22
HDGFL3-206ENST00000568294 RND2P52198 227 aa7.46□□□□□ -1.22
HDGFL3-206ENST00000568294 BPIFB3P59826 476 aa7.46□□□□□ -1.22
HDGFL3-206ENST00000568294 SSTP61278 116 aa7.46□□□□□ -1.22
HDGFL3-206ENST00000568294 ZCCHC24Q8N2G6 241 aaKnown RBP7.46□□□□□ -1.22
HDGFL3-206ENST00000568294 MS4A10Q96PG2 267 aa7.46□□□□□ -1.22
HDGFL3-206ENST00000568294 HSD17B10Q99714 261 aaKnown RBP7.46□□□□□ -1.22
HDGFL3-206ENST00000568294 OR6C3Q9NZP0 311 aa7.46□□□□□ -1.22
HDGFL3-206ENST00000568294 TRBV24-1A0A075B6N3 115 aa7.46□□□□□ -1.22
HDGFL3-206ENST00000568294 TRAV1-1A0A0B4J248 108 aa7.46□□□□□ -1.22
HDGFL3-206ENST00000568294 C15orf62A8K5M9 175 aa7.46□□□□□ -1.22
HDGFL3-206ENST00000568294 PLAUP00749 431 aa7.46□□□□□ -1.22
HDGFL3-206ENST00000568294 CA1P00915 261 aaPredicted RBP7.46□□□□□ -1.22
HDGFL3-206ENST00000568294 PMCHP20382 165 aa7.46□□□□□ -1.22
HDGFL3-206ENST00000568294 MLANAQ16655 118 aa7.46□□□□□ -1.22
HDGFL3-206ENST00000568294 HLA-DRB5Q30154 266 aa7.46□□□□□ -1.22
HDGFL3-206ENST00000568294 TEX38Q6PEX7 206 aa7.46□□□□□ -1.22
HDGFL3-206ENST00000568294 WDR82Q6UXN9 313 aa7.46□□□□□ -1.22
HDGFL3-206ENST00000568294 ACP7Q6ZNF0 438 aa7.46□□□□□ -1.22
HDGFL3-206ENST00000568294 DOLPP1Q86YN1 238 aa7.46□□□□□ -1.22
HDGFL3-206ENST00000568294 DEFB123Q8N688 67 aa7.46□□□□□ -1.22
HDGFL3-206ENST00000568294 P2RX4Q99571 388 aa7.46□□□□□ -1.22
HDGFL3-206ENST00000568294 HIPK2Q9H2X6 1198 aa7.46□□□□□ -1.22
HDGFL3-206ENST00000568294 ENY2Q9NPA8 101 aa7.46□□□□□ -1.22
HDGFL3-206ENST00000568294 MANBALQ9NQG1 85 aa7.46□□□□□ -1.22
HDGFL3-206ENST00000568294 TP53TG5Q9Y2B4 290 aa7.46□□□□□ -1.22
HDGFL3-206ENST00000568294 TOX4O94842 621 aa7.45□□□□□ -1.22
HDGFL3-206ENST00000568294 COX5BP10606 129 aa7.45□□□□□ -1.22
HDGFL3-206ENST00000568294 ERVFC1-1P60608 527 aa7.45□□□□□ -1.22
HDGFL3-206ENST00000568294 KRTDAPP60985 99 aa7.45□□□□□ -1.22
HDGFL3-206ENST00000568294 PRR27Q6MZM9 219 aa7.45□□□□□ -1.22
HDGFL3-206ENST00000568294 MRPL54Q6P161 138 aaKnown RBP7.45□□□□□ -1.22
HDGFL3-206ENST00000568294 LINC00596Q86U02 117 aa7.45□□□□□ -1.22
HDGFL3-206ENST00000568294 LINC01551Q86U37 167 aa7.45□□□□□ -1.22
HDGFL3-206ENST00000568294 CD177Q8N6Q3 437 aa7.45□□□□□ -1.22
HDGFL3-206ENST00000568294 TBX15Q96SF7 602 aa7.45□□□□□ -1.22
HDGFL3-206ENST00000568294 S1PR3Q99500 378 aa7.45□□□□□ -1.22
HDGFL3-206ENST00000568294 CTDSP1Q9GZU7 261 aa7.45□□□□□ -1.22
HDGFL3-206ENST00000568294 SEPSECSQ9HD40 501 aaKnown RBP7.45□□□□□ -1.22
HDGFL3-206ENST00000568294 FKBP11Q9NYL4 201 aa7.45□□□□□ -1.22
HDGFL3-206ENST00000568294 PRDX2P32119 198 aa7.45□□□□□ -1.22
HDGFL3-206ENST00000568294 ADMP35318 185 aa7.45□□□□□ -1.22
HDGFL3-206ENST00000568294 MAS1LP35410 378 aa7.45□□□□□ -1.22
HDGFL3-206ENST00000568294 SMIM21Q3B7S5 101 aa7.45□□□□□ -1.22
HDGFL3-206ENST00000568294 TDRG1Q3Y452 100 aa7.45□□□□□ -1.22
HDGFL3-206ENST00000568294 Q8IYB0 196 aa7.45□□□□□ -1.22
HDGFL3-206ENST00000568294 C9orf106Q8NAJ2 232 aa7.45□□□□□ -1.22
HDGFL3-206ENST00000568294 FDCSPQ8NFU4 85 aa7.45□□□□□ -1.22
HDGFL3-206ENST00000568294 VN1R17PQ8TDU5 208 aa7.45□□□□□ -1.22
HDGFL3-206ENST00000568294 TAAR6Q96RI8 345 aa7.45□□□□□ -1.22
HDGFL3-206ENST00000568294 TRBV20OR9-2A0A075B6H5 130 aa7.45□□□□□ -1.22
HDGFL3-206ENST00000568294 IGHV3-21A0A0B4J1V1 117 aa7.45□□□□□ -1.22
HDGFL3-206ENST00000568294 CGAP01215 116 aa7.45□□□□□ -1.22
HDGFL3-206ENST00000568294 CYC1P08574 325 aa7.45□□□□□ -1.22
HDGFL3-206ENST00000568294 NTF3P20783 257 aa7.45□□□□□ -1.22
HDGFL3-206ENST00000568294 JOSD1Q15040 202 aaPredicted RBP7.45□□□□□ -1.22
HDGFL3-206ENST00000568294 TGIF2LYQ8IUE0 185 aa7.45□□□□□ -1.22
HDGFL3-206ENST00000568294 LURAP1LQ8IV03 231 aa7.45□□□□□ -1.22
HDGFL3-206ENST00000568294 ATOH7Q8N100 152 aa7.45□□□□□ -1.22
HDGFL3-206ENST00000568294 TMEM140Q9NV12 185 aa7.45□□□□□ -1.22
HDGFL3-206ENST00000568294 TCAPO15273 167 aa7.44□□□□□ -1.22
HDGFL3-206ENST00000568294 IGFBP2P18065 325 aa7.44□□□□□ -1.22
HDGFL3-206ENST00000568294 PSG5Q15238 335 aa7.44□□□□□ -1.22
HDGFL3-206ENST00000568294 UBALD2Q8IYN6 164 aa7.44□□□□□ -1.22
HDGFL3-206ENST00000568294 ACY3Q96HD9 319 aa7.44□□□□□ -1.22
HDGFL3-206ENST00000568294 FER1L6-AS2Q96M78 137 aa7.44□□□□□ -1.22
HDGFL3-206ENST00000568294 PLEKHA3Q9HB20 300 aa7.44□□□□□ -1.22
HDGFL3-206ENST00000568294 DCAF16Q9NXF7 216 aa7.44□□□□□ -1.22
HDGFL3-206ENST00000568294 YTHDF2Q9Y5A9 579 aaKnown RBP7.44□□□□□ -1.22
HDGFL3-206ENST00000568294 PLXNB1O43157 2135 aa7.44□□□□□ -1.22
HDGFL3-206ENST00000568294 H3BTX0 84 aa7.44□□□□□ -1.22
HDGFL3-206ENST00000568294 FCN1O00602 326 aa7.44□□□□□ -1.22
HDGFL3-206ENST00000568294 MBP02144 154 aa7.44□□□□□ -1.22
HDGFL3-206ENST00000568294 ZNF134P52741 427 aa7.44□□□□□ -1.22
HDGFL3-206ENST00000568294 RPL31P62899 125 aaKnown RBP7.44□□□□□ -1.22
HDGFL3-206ENST00000568294 ZNF146Q15072 292 aa7.44□□□□□ -1.22
HDGFL3-206ENST00000568294 OR8I2Q8N0Y5 310 aa7.44□□□□□ -1.22
HDGFL3-206ENST00000568294 RPRMLQ8N4K4 120 aa7.44□□□□□ -1.22
HDGFL3-206ENST00000568294 OCC1Q8TAD7 63 aa7.44□□□□□ -1.22
HDGFL3-206ENST00000568294 CMTM2Q8TAZ6 248 aa7.44□□□□□ -1.22
HDGFL3-206ENST00000568294 Q8TCH9 128 aa7.44□□□□□ -1.22
HDGFL3-206ENST00000568294 SSBP3Q9BWW4 388 aaPredicted RBP7.44□□□□□ -1.22
HDGFL3-206ENST00000568294 RNASE7Q9H1E1 156 aaKnown RBP7.44□□□□□ -1.22
HDGFL3-206ENST00000568294 MBNL3Q9NUK0 354 aaKnown RBP7.44□□□□□ -1.22
HDGFL3-206ENST00000568294 SPAARA0A1B0GVQ0 90 aa7.43□□□□□ -1.22
HDGFL3-206ENST00000568294 SNURFLB1AK76 121 aa7.43□□□□□ -1.22
HDGFL3-206ENST00000568294 ACP1P24666 158 aa7.43□□□□□ -1.22
HDGFL3-206ENST00000568294 TIMP3P35625 211 aa7.43□□□□□ -1.22
HDGFL3-206ENST00000568294 ERVK11-1P61568 191 aa7.43□□□□□ -1.22
HDGFL3-206ENST00000568294 HTD2P86397 168 aa7.43□□□□□ -1.22
HDGFL3-206ENST00000568294 NRN1LQ496H8 165 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms