RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 ZNF585BQ52M93 769 aa6.3□□□□□ -1.4
HDGFL3-205ENST00000568129 AADACL3Q5VUY0 350 aa6.3□□□□□ -1.4
HDGFL3-205ENST00000568129 OR4A47Q6IF82 309 aa6.3□□□□□ -1.4
HDGFL3-205ENST00000568129 LPCAT3Q6P1A2 487 aa6.3□□□□□ -1.4
HDGFL3-205ENST00000568129 ACSM6Q6P461 480 aa6.3□□□□□ -1.4
HDGFL3-205ENST00000568129 LHFPL1Q86WI0 220 aa6.3□□□□□ -1.4
HDGFL3-205ENST00000568129 SPAG16Q8N0X2 631 aa6.3□□□□□ -1.4
HDGFL3-205ENST00000568129 OR5T1Q8NG75 326 aa6.3□□□□□ -1.4
HDGFL3-205ENST00000568129 OR5H2Q8NGV7 314 aa6.3□□□□□ -1.4
HDGFL3-205ENST00000568129 GRPEL2Q8TAA5 225 aa6.3□□□□□ -1.4
HDGFL3-205ENST00000568129 DLX4Q92988 240 aaPredicted RBP6.3□□□□□ -1.4
HDGFL3-205ENST00000568129 GPHA2Q96T91 129 aa6.3□□□□□ -1.4
HDGFL3-205ENST00000568129 SPIN2AQ99865 258 aa6.3□□□□□ -1.4
HDGFL3-205ENST00000568129 SPIN2BQ9BPZ2 258 aa6.3□□□□□ -1.4
HDGFL3-205ENST00000568129 SOSTQ9BQB4 213 aa6.3□□□□□ -1.4
HDGFL3-205ENST00000568129 SRSF8Q9BRL6 282 aaKnown RBP6.3□□□□□ -1.4
HDGFL3-205ENST00000568129 ZNF2Q9BSG1 426 aaPredicted RBP6.3□□□□□ -1.4
HDGFL3-205ENST00000568129 RSRP1Q9BUV0 290 aa6.3□□□□□ -1.4
HDGFL3-205ENST00000568129 NXF2Q9GZY0 626 aaKnown RBP6.3□□□□□ -1.4
HDGFL3-205ENST00000568129 ALX4Q9H161 411 aaPredicted RBP6.3□□□□□ -1.4
HDGFL3-205ENST00000568129 SLC2A9Q9NRM0 540 aa6.3□□□□□ -1.4
HDGFL3-205ENST00000568129 COMMD9Q9P000 198 aa6.3□□□□□ -1.4
HDGFL3-205ENST00000568129 CCDC59Q9P031 241 aaKnown RBP6.3□□□□□ -1.4
HDGFL3-205ENST00000568129 RABL2AQ9UBK7 228 aaPredicted RBP6.3□□□□□ -1.4
HDGFL3-205ENST00000568129 RABL2BQ9UNT1 228 aa6.3□□□□□ -1.4
HDGFL3-205ENST00000568129 A3GALT2U3KPV4 340 aa6.3□□□□□ -1.4
HDGFL3-205ENST00000568129 COL7A1Q02388 2944 aa6.3□□□□□ -1.4
HDGFL3-205ENST00000568129 IGHV4OR15-8A0A075B7B6 117 aa6.29□□□□□ -1.4
HDGFL3-205ENST00000568129 A0A087WW49 117 aa6.29□□□□□ -1.4
HDGFL3-205ENST00000568129 NPIPB5A8MRT5 1133 aa6.29□□□□□ -1.4
HDGFL3-205ENST00000568129 GPR31O00270 319 aa6.29□□□□□ -1.4
HDGFL3-205ENST00000568129 UPK2O00526 184 aa6.29□□□□□ -1.4
HDGFL3-205ENST00000568129 CTDSP2O14595 271 aa6.29□□□□□ -1.4
HDGFL3-205ENST00000568129 PRB2P02812 416 aaPredicted RBP6.29□□□□□ -1.4
HDGFL3-205ENST00000568129 NQO2P16083 231 aa6.29□□□□□ -1.4
HDGFL3-205ENST00000568129 TBPP20226 339 aa6.29□□□□□ -1.4
HDGFL3-205ENST00000568129 F2RP25116 425 aa6.29□□□□□ -1.4
HDGFL3-205ENST00000568129 HLA-DMAP28067 261 aa6.29□□□□□ -1.4
HDGFL3-205ENST00000568129 TPPP2P59282 170 aa6.29□□□□□ -1.4
HDGFL3-205ENST00000568129 FXYD4P59646 89 aa6.29□□□□□ -1.4
HDGFL3-205ENST00000568129 HERV-K104P61576 105 aa6.29□□□□□ -1.4
HDGFL3-205ENST00000568129 RPL8P62917 257 aaKnown RBP6.29□□□□□ -1.4
HDGFL3-205ENST00000568129 MRPS10P82664 201 aaKnown RBP6.29□□□□□ -1.4
HDGFL3-205ENST00000568129 DGCR2P98153 550 aa6.29□□□□□ -1.4
HDGFL3-205ENST00000568129 ZNF45Q02386 682 aa6.29□□□□□ -1.4
HDGFL3-205ENST00000568129 KLF5Q13887 457 aaPredicted RBP6.29□□□□□ -1.4
HDGFL3-205ENST00000568129 TNXAQ16473 311 aa6.29□□□□□ -1.4
HDGFL3-205ENST00000568129 SLC25A42Q86VD7 318 aa6.29□□□□□ -1.4
HDGFL3-205ENST00000568129 CLVS1Q8IUQ0 354 aaPredicted RBP6.29□□□□□ -1.4
HDGFL3-205ENST00000568129 VKORC1L1Q8N0U8 176 aa6.29□□□□□ -1.4
HDGFL3-205ENST00000568129 OR52I2Q8NH67 350 aa6.29□□□□□ -1.4
HDGFL3-205ENST00000568129 ABHD5Q8WTS1 349 aa6.29□□□□□ -1.4
HDGFL3-205ENST00000568129 CASTOR1Q8WTX7 329 aa6.29□□□□□ -1.4
HDGFL3-205ENST00000568129 DCUN1D4Q92564 292 aa6.29□□□□□ -1.4
HDGFL3-205ENST00000568129 DGCR14Q96DF8 476 aaKnown RBP6.29□□□□□ -1.4
HDGFL3-205ENST00000568129 MS4A10Q96PG2 267 aa6.29□□□□□ -1.4
HDGFL3-205ENST00000568129 DCUN1D5Q9BTE7 237 aa6.29□□□□□ -1.4
HDGFL3-205ENST00000568129 SLIRPQ9GZT3 109 aaKnown RBP6.29□□□□□ -1.4
HDGFL3-205ENST00000568129 FXYD6Q9H0Q3 95 aa6.29□□□□□ -1.4
HDGFL3-205ENST00000568129 RANGRFQ9HD47 186 aaPredicted RBP6.29□□□□□ -1.4
HDGFL3-205ENST00000568129 KLK11Q9UBX7 282 aa6.29□□□□□ -1.4
HDGFL3-205ENST00000568129 ZNF257Q9Y2Q1 563 aa6.29□□□□□ -1.4
HDGFL3-205ENST00000568129 LSM4Q9Y4Z0 139 aaKnown RBP6.29□□□□□ -1.4
HDGFL3-205ENST00000568129 DMRT1Q9Y5R6 373 aa6.29□□□□□ -1.4
HDGFL3-205ENST00000568129 CEPT1Q9Y6K0 416 aa6.29□□□□□ -1.4
HDGFL3-205ENST00000568129 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.28□□□□□ -1.4
HDGFL3-205ENST00000568129 FAM223BA6NKX1 122 aa6.28□□□□□ -1.4
HDGFL3-205ENST00000568129 FAM25AB3EWG3 89 aa6.28□□□□□ -1.4
HDGFL3-205ENST00000568129 FAM25CB3EWG5 89 aa6.28□□□□□ -1.4
HDGFL3-205ENST00000568129 FAM25GB3EWG6 89 aa6.28□□□□□ -1.4
HDGFL3-205ENST00000568129 SEC14L6B5MCN3 397 aa6.28□□□□□ -1.4
HDGFL3-205ENST00000568129 GABARAPH6UMI1 98 aa6.28□□□□□ -1.4
HDGFL3-205ENST00000568129 OVOL1O14753 267 aa6.28□□□□□ -1.4
HDGFL3-205ENST00000568129 TNFSF12O43508 249 aa6.28□□□□□ -1.4
HDGFL3-205ENST00000568129 FCER2P06734 321 aa6.28□□□□□ -1.4
HDGFL3-205ENST00000568129 CTRB1P17538 263 aa6.28□□□□□ -1.4
HDGFL3-205ENST00000568129 HLA-GP17693 338 aa6.28□□□□□ -1.4
HDGFL3-205ENST00000568129 ZP3P21754 424 aa6.28□□□□□ -1.4
HDGFL3-205ENST00000568129 HOXD3P31249 432 aaPredicted RBP6.28□□□□□ -1.4
HDGFL3-205ENST00000568129 RPL27AP46776 148 aaKnown RBP6.28□□□□□ -1.4
HDGFL3-205ENST00000568129 MECP2P51608 486 aaKnown RBP6.28□□□□□ -1.4
HDGFL3-205ENST00000568129 OR2B8PP59922 312 aa6.28□□□□□ -1.4
HDGFL3-205ENST00000568129 RND3P61587 244 aa6.28□□□□□ -1.4
HDGFL3-205ENST00000568129 OR2B11Q5JQS5 317 aa6.28□□□□□ -1.4
HDGFL3-205ENST00000568129 FAM209BQ5JX69 171 aa6.28□□□□□ -1.4
HDGFL3-205ENST00000568129 CTRB2Q6GPI1 263 aa6.28□□□□□ -1.4
HDGFL3-205ENST00000568129 THOC7Q6I9Y2 204 aaKnown RBP6.28□□□□□ -1.4
HDGFL3-205ENST00000568129 IL34Q6ZMJ4 242 aa6.28□□□□□ -1.4
HDGFL3-205ENST00000568129 ZNF429Q86V71 674 aa6.28□□□□□ -1.4
HDGFL3-205ENST00000568129 SNX29P2Q8IUI4 249 aa6.28□□□□□ -1.4
HDGFL3-205ENST00000568129 FAM223AQ8IWN6 122 aa6.28□□□□□ -1.4
HDGFL3-205ENST00000568129 CMTM1Q8IZ96 169 aa6.28□□□□□ -1.4
HDGFL3-205ENST00000568129 ARRDC1Q8N5I2 433 aa6.28□□□□□ -1.4
HDGFL3-205ENST00000568129 TMEM229BQ8NBD8 167 aa6.28□□□□□ -1.4
HDGFL3-205ENST00000568129 NECAP1Q8NC96 275 aa6.28□□□□□ -1.4
HDGFL3-205ENST00000568129 MRAPQ8TCY5 172 aa6.28□□□□□ -1.4
HDGFL3-205ENST00000568129 DPF1Q92782 380 aa6.28□□□□□ -1.4
HDGFL3-205ENST00000568129 ZNF486Q96H40 463 aaPredicted RBP6.28□□□□□ -1.4
HDGFL3-205ENST00000568129 FANCD2OSQ96PS1 177 aa6.28□□□□□ -1.4
HDGFL3-205ENST00000568129 OR5B12Q96R08 314 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms