RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 A0A1B0GV50 99 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 MAP1LC3B2A6NCE7 125 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 LRCOL1A6NCL2 159 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 C21orf140B9A014 251 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 C12orf77C9JDV5 145 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 M0R2Z0 102 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 DEGS1O15121 323 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 CRXO43186 299 aaPredicted RBP2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 RBFOX2O43251 390 aaKnown RBP eCLIP2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 B4GALT5O43286 388 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 ZNF207O43670 478 aaKnown RBP2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 ATP5LO75964 103 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 DIRAS1O95057 198 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 GPR75O95800 540 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 HLA-HP01893 362 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 CTSLP07711 333 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 ESDP10768 282 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 CD79AP11912 226 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 UGT2B7P16662 529 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 KITLGP21583 273 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 OR10J1P30954 320 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 CFHR2P36980 270 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 NMUP48645 174 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 GPM6AP51674 278 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 AQP5P55064 265 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 ARPP19P56211 112 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 TCL1AP56279 114 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 RHOBP62745 196 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 HIST1H3AP68431 136 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 H3F3AP84243 136 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 ACVR1Q04771 509 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 ST3GAL4Q11206 333 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 FZD2Q14332 565 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 GINS1Q14691 196 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 JOSD1Q15040 202 aaPredicted RBP2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 TMEM183BQ1AE95 376 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 MESTQ5EB52 335 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 TCEAL5Q5H9L2 206 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 DMRTC1Q5HYR2 192 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 PYY3Q5JQD4 70 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 C1orf194Q5T5A4 169 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 SAXO2Q658L1 398 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 ZFAND6Q6FIF0 208 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 C22orf42Q6IC83 251 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 Q6ZN92 141 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 SAXO1Q8IYX7 474 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 LRRC25Q8N386 305 aaPredicted RBP2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 MS4A15Q8N5U1 240 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 OR4K2Q8NGD2 314 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 OR51T1Q8NGJ9 327 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 OR8D4Q8NGM9 314 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 OR1P1Q8NH06 330 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 RXFP4Q8TDU9 374 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 Q8WTZ3 238 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 SDR42E1Q8WUS8 393 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 C10orf82Q8WW14 230 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 GALMQ96C23 342 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 C10orf35Q96D05 121 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 SMIM19Q96E16 107 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 PIK3IP1Q96FE7 263 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 SLC35G5Q96KT7 338 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 MIEN1Q9BRT3 115 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 SNHG12Q9BXW3 62 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 PECRQ9BY49 303 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 SAMD10Q9BYL1 202 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 REG4Q9BYZ8 158 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 MAP1LC3BQ9GZQ8 125 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 OR52D1Q9H346 318 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 ENY2Q9NPA8 101 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 RBFOX1Q9NWB1 397 aaKnown RBP2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 ZNF629Q9UEG4 869 aaPredicted RBP2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 NUFIP1Q9UHK0 495 aaKnown RBP2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 TPRKBQ9Y3C4 175 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 CSDC2Q9Y534 153 aaKnown RBP2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 SLC25A15Q9Y619 301 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 HECTD1Q9ULT8 2610 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 ITPR1Q14643 2758 aa2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 PHF3Q92576 2039 aaKnown RBP2.24□□□□□ -2.05
HERPUD1-212ENST00000567944 CREBBPQ92793 2442 aa2.23□□□□□ -2.05
HERPUD1-212ENST00000567944 C2CD3Q4AC94 2353 aa2.23□□□□□ -2.05
HERPUD1-212ENST00000567944 LAMA1P25391 3075 aa2.23□□□□□ -2.05
HERPUD1-212ENST00000567944 IGLV3-22A0A075B6J6 115 aa2.23□□□□□ -2.05
HERPUD1-212ENST00000567944 SMIM9A6NGZ8 99 aa2.23□□□□□ -2.05
HERPUD1-212ENST00000567944 ZNF99A8MXY4 864 aaPredicted RBP2.23□□□□□ -2.05
HERPUD1-212ENST00000567944 F5H768 121 aa2.23□□□□□ -2.05
HERPUD1-212ENST00000567944 K7EPK0 472 aa2.23□□□□□ -2.05
HERPUD1-212ENST00000567944 SIRPB1O00241 398 aa2.23□□□□□ -2.05
HERPUD1-212ENST00000567944 FABP7O15540 132 aa2.23□□□□□ -2.05
HERPUD1-212ENST00000567944 FCN3O75636 299 aa2.23□□□□□ -2.05
HERPUD1-212ENST00000567944 DHRS3O75911 302 aa2.23□□□□□ -2.05
HERPUD1-212ENST00000567944 AIFM1O95831 613 aa2.23□□□□□ -2.05
HERPUD1-212ENST00000567944 HAND1O96004 215 aa2.23□□□□□ -2.05
HERPUD1-212ENST00000567944 HPRT1P00492 218 aa2.23□□□□□ -2.05
HERPUD1-212ENST00000567944 OPN1SWP03999 348 aa2.23□□□□□ -2.05
HERPUD1-212ENST00000567944 HIST1H1DP16402 221 aaKnown RBP2.23□□□□□ -2.05
HERPUD1-212ENST00000567944 RAB5AP20339 215 aa2.23□□□□□ -2.05
HERPUD1-212ENST00000567944 TAC1P20366 129 aa2.23□□□□□ -2.05
HERPUD1-212ENST00000567944 EVI2AP22794 236 aa2.23□□□□□ -2.05
HERPUD1-212ENST00000567944 ATP6V0CP27449 155 aa2.23□□□□□ -2.05
HERPUD1-212ENST00000567944 CD1CP29017 333 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms