RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 VKORC1L1Q8N0U8 176 aa15.37■□□□□ 0.05
CMTM3-211ENST00000565922 OR4A5Q8NH83 315 aa15.37■□□□□ 0.05
CMTM3-211ENST00000565922 TMEM167AQ8TBQ9 72 aa15.37■□□□□ 0.05
CMTM3-211ENST00000565922 GPHA2Q96T91 129 aa15.37■□□□□ 0.05
CMTM3-211ENST00000565922 OVOL1O14753 267 aa15.36■□□□□ 0.05
CMTM3-211ENST00000565922 RGS5O15539 181 aa15.36■□□□□ 0.05
CMTM3-211ENST00000565922 IGHV3-11P01762 117 aa15.36■□□□□ 0.05
CMTM3-211ENST00000565922 NQO2P16083 231 aa15.36■□□□□ 0.05
CMTM3-211ENST00000565922 BRWD1-AS2P59051 145 aa15.36■□□□□ 0.05
CMTM3-211ENST00000565922 DGCR2P98153 550 aa15.36■□□□□ 0.05
CMTM3-211ENST00000565922 DCTN2Q13561 401 aaKnown RBP15.36■□□□□ 0.05
CMTM3-211ENST00000565922 LYSMD2Q8IV50 215 aa15.36■□□□□ 0.05
CMTM3-211ENST00000565922 OR51H1Q8NH63 302 aa15.36■□□□□ 0.05
CMTM3-211ENST00000565922 USMG5Q96IX5 58 aa15.36■□□□□ 0.05
CMTM3-211ENST00000565922 ALX4Q9H161 411 aaPredicted RBP15.36■□□□□ 0.05
CMTM3-211ENST00000565922 PLEKHA2Q9HB19 425 aa15.36■□□□□ 0.05
CMTM3-211ENST00000565922 RANGRFQ9HD47 186 aaPredicted RBP15.36■□□□□ 0.05
CMTM3-211ENST00000565922 BET1LQ9NYM9 111 aa15.36■□□□□ 0.05
CMTM3-211ENST00000565922 IGHV4OR15-8A0A075B7B6 117 aa15.35■□□□□ 0.05
CMTM3-211ENST00000565922 A0A087WW49 117 aa15.35■□□□□ 0.05
CMTM3-211ENST00000565922 GPR31O00270 319 aa15.35■□□□□ 0.05
CMTM3-211ENST00000565922 RPL27AP46776 148 aaKnown RBP15.35■□□□□ 0.05
CMTM3-211ENST00000565922 KRTAP10-11P60412 298 aa15.35■□□□□ 0.05
CMTM3-211ENST00000565922 RPL8P62917 257 aaKnown RBP15.35■□□□□ 0.05
CMTM3-211ENST00000565922 SPCS2Q15005 226 aa15.35■□□□□ 0.05
CMTM3-211ENST00000565922 SSX9Q7RTT3 188 aa15.35■□□□□ 0.05
CMTM3-211ENST00000565922 ADAD2Q8NCV1 583 aaKnown RBP15.35■□□□□ 0.05
CMTM3-211ENST00000565922 FXYD6Q9H0Q3 95 aa15.35■□□□□ 0.05
CMTM3-211ENST00000565922 COMMD9Q9P000 198 aa15.35■□□□□ 0.05
CMTM3-211ENST00000565922 PRKDCP78527 4128 aaKnown RBP15.35■□□□□ 0.05
CMTM3-211ENST00000565922 RLN1P04808 185 aa15.34■□□□□ 0.05
CMTM3-211ENST00000565922 APELAP0DMC3 54 aa15.34■□□□□ 0.05
CMTM3-211ENST00000565922 TBPP20226 339 aa15.34■□□□□ 0.05
CMTM3-211ENST00000565922 ZP3P21754 424 aa15.34■□□□□ 0.05
CMTM3-211ENST00000565922 POU2AF1Q16633 256 aa15.34■□□□□ 0.05
CMTM3-211ENST00000565922 VAX1Q5SQQ9 334 aa15.34■□□□□ 0.05
CMTM3-211ENST00000565922 OR4A47Q6IF82 309 aa15.34■□□□□ 0.05
CMTM3-211ENST00000565922 DCUN1D4Q92564 292 aa15.34■□□□□ 0.05
CMTM3-211ENST00000565922 HRASLSQ9HDD0 168 aa15.34■□□□□ 0.05
CMTM3-211ENST00000565922 CCDC59Q9P031 241 aaKnown RBP15.34■□□□□ 0.05
CMTM3-211ENST00000565922 RABL2AQ9UBK7 228 aaPredicted RBP15.34■□□□□ 0.05
CMTM3-211ENST00000565922 RABL2BQ9UNT1 228 aa15.34■□□□□ 0.05
CMTM3-211ENST00000565922 ZNF257Q9Y2Q1 563 aa15.34■□□□□ 0.05
CMTM3-211ENST00000565922 DPPA5A6NC42 116 aa15.33■□□□□ 0.04
CMTM3-211ENST00000565922 FAM223BA6NKX1 122 aa15.33■□□□□ 0.04
CMTM3-211ENST00000565922 IFNA6P05013 189 aa15.33■□□□□ 0.04
CMTM3-211ENST00000565922 FGF2P09038 288 aa15.33■□□□□ 0.04
CMTM3-211ENST00000565922 F2RP25116 425 aa15.33■□□□□ 0.04
CMTM3-211ENST00000565922 SLURP1P55000 103 aa15.33■□□□□ 0.04
CMTM3-211ENST00000565922 ERVK-16P61578 105 aa15.33■□□□□ 0.04
CMTM3-211ENST00000565922 MRPS10P82664 201 aaKnown RBP15.33■□□□□ 0.04
CMTM3-211ENST00000565922 C10orf55Q5SWW7 151 aa15.33■□□□□ 0.04
CMTM3-211ENST00000565922 ZNF429Q86V71 674 aa15.33■□□□□ 0.04
CMTM3-211ENST00000565922 FAM223AQ8IWN6 122 aa15.33■□□□□ 0.04
CMTM3-211ENST00000565922 TTC9CQ8N5M4 171 aa15.33■□□□□ 0.04
CMTM3-211ENST00000565922 DMBX1Q8NFW5 382 aa15.33■□□□□ 0.04
CMTM3-211ENST00000565922 PGLYRP1O75594 196 aaPredicted RBP15.32■□□□□ 0.04
CMTM3-211ENST00000565922 DHFRP00374 187 aa15.32■□□□□ 0.04
CMTM3-211ENST00000565922 HLA-GP17693 338 aa15.32■□□□□ 0.04
CMTM3-211ENST00000565922 RNASE10Q5GAN6 216 aaKnown RBP15.32■□□□□ 0.04
CMTM3-211ENST00000565922 FAM209BQ5JX69 171 aa15.32■□□□□ 0.04
CMTM3-211ENST00000565922 SLC38A6Q8IZM9 456 aa15.32■□□□□ 0.04
CMTM3-211ENST00000565922 FCAMRQ8WWV6 532 aa15.32■□□□□ 0.04
CMTM3-211ENST00000565922 DLX4Q92988 240 aaPredicted RBP15.32■□□□□ 0.04
CMTM3-211ENST00000565922 DGCR14Q96DF8 476 aaKnown RBP15.32■□□□□ 0.04
CMTM3-211ENST00000565922 FYTTD1Q96QD9 318 aaKnown RBP15.32■□□□□ 0.04
CMTM3-211ENST00000565922 MTFP1Q9UDX5 166 aa15.32■□□□□ 0.04
CMTM3-211ENST00000565922 SCOCQ9UIL1 159 aa15.32■□□□□ 0.04
CMTM3-211ENST00000565922 K7EIL1 84 aa15.31■□□□□ 0.04
CMTM3-211ENST00000565922 ZNF735P0CB33 412 aa15.31■□□□□ 0.04
CMTM3-211ENST00000565922 UCP3P55916 312 aa15.31■□□□□ 0.04
CMTM3-211ENST00000565922 SSBP1Q04837 148 aaKnown RBP15.31■□□□□ 0.04
CMTM3-211ENST00000565922 RNASE12Q5GAN4 147 aaKnown RBP15.31■□□□□ 0.04
CMTM3-211ENST00000565922 LAX1Q8IWV1 398 aa15.31■□□□□ 0.04
CMTM3-211ENST00000565922 ARRDC1Q8N5I2 433 aa15.31■□□□□ 0.04
CMTM3-211ENST00000565922 OR52I2Q8NH67 350 aa15.31■□□□□ 0.04
CMTM3-211ENST00000565922 DYNC2LI1Q8TCX1 351 aa15.31■□□□□ 0.04
CMTM3-211ENST00000565922 SLC2A9Q9NRM0 540 aa15.31■□□□□ 0.04
CMTM3-211ENST00000565922 FAM212BQ9NTI7 297 aaPredicted RBP15.31■□□□□ 0.04
CMTM3-211ENST00000565922 KLK11Q9UBX7 282 aa15.31■□□□□ 0.04
CMTM3-211ENST00000565922 DNAH3Q8TD57 4116 aa15.31■□□□□ 0.04
CMTM3-211ENST00000565922 WI2-2373I1.2A0A1W2PRP0 233 aa15.3■□□□□ 0.04
CMTM3-211ENST00000565922 NPIPB5A8MRT5 1133 aa15.3■□□□□ 0.04
CMTM3-211ENST00000565922 GABARAPH6UMI1 98 aa15.3■□□□□ 0.04
CMTM3-211ENST00000565922 S1PR2O95136 353 aa15.3■□□□□ 0.04
CMTM3-211ENST00000565922 RHOGP84095 191 aa15.3■□□□□ 0.04
CMTM3-211ENST00000565922 THOC7Q6I9Y2 204 aaKnown RBP15.3■□□□□ 0.04
CMTM3-211ENST00000565922 ZNF343Q6P1L6 599 aa15.3■□□□□ 0.04
CMTM3-211ENST00000565922 NECAP1Q8NC96 275 aa15.3■□□□□ 0.04
CMTM3-211ENST00000565922 ABHD1Q96SE0 405 aa15.3■□□□□ 0.04
CMTM3-211ENST00000565922 RSRP1Q9BUV0 290 aa15.3■□□□□ 0.04
CMTM3-211ENST00000565922 COMMD5Q9GZQ3 224 aa15.3■□□□□ 0.04
CMTM3-211ENST00000565922 MIXL1Q9H2W2 232 aa15.3■□□□□ 0.04
CMTM3-211ENST00000565922 TMEM140Q9NV12 185 aa15.3■□□□□ 0.04
CMTM3-211ENST00000565922 PEF1Q9UBV8 284 aaKnown RBP15.3■□□□□ 0.04
CMTM3-211ENST00000565922 TGP01266 2768 aa15.29■□□□□ 0.04
CMTM3-211ENST00000565922 TRBV9A0A0B4J1U6 114 aa15.29■□□□□ 0.04
CMTM3-211ENST00000565922 MARCH11A6NNE9 402 aa15.29■□□□□ 0.04
CMTM3-211ENST00000565922 TEX22C9J3V5 150 aa15.29■□□□□ 0.04
CMTM3-211ENST00000565922 UPK2O00526 184 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms