RNA–Protein interactions for RNA: ENST00000565688.5

CLN3-218, Transcript of CLN3, battenin, humanhuman

TSL 3

Gene CLN3, Length 650 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-218ENST00000565688 SCAND1P57086 179 aa14.18□□□□□ -0.14
CLN3-218ENST00000565688 EIF4EBP1Q13541 118 aaPredicted RBP14.18□□□□□ -0.14
CLN3-218ENST00000565688 CD300EQ496F6 205 aaPredicted RBP14.18□□□□□ -0.14
CLN3-218ENST00000565688 PUSL1Q8N0Z8 303 aaKnown RBP14.18□□□□□ -0.14
CLN3-218ENST00000565688 MFSD4AQ8N468 514 aa14.18□□□□□ -0.14
CLN3-218ENST00000565688 LGALS14Q8TCE9 139 aa14.18□□□□□ -0.14
CLN3-218ENST00000565688 DYNLRB2Q8TF09 96 aa14.18□□□□□ -0.14
CLN3-218ENST00000565688 AIFM2Q9BRQ8 373 aa14.18□□□□□ -0.14
CLN3-218ENST00000565688 SLC2A9Q9NRM0 540 aa14.18□□□□□ -0.14
CLN3-218ENST00000565688 RHBDL2Q9NX52 303 aa14.18□□□□□ -0.14
CLN3-218ENST00000565688 SLC2A8Q9NY64 477 aa14.18□□□□□ -0.14
CLN3-218ENST00000565688 TAS2R8Q9NYW2 309 aa14.18□□□□□ -0.14
CLN3-218ENST00000565688 HMX3A6NHT5 357 aa14.17□□□□□ -0.14
CLN3-218ENST00000565688 LGALS9O00182 355 aa14.17□□□□□ -0.14
CLN3-218ENST00000565688 TPPPO94811 219 aa14.17□□□□□ -0.14
CLN3-218ENST00000565688 ZNF735P0CB33 412 aa14.17□□□□□ -0.14
CLN3-218ENST00000565688 CD81P60033 236 aa14.17□□□□□ -0.14
CLN3-218ENST00000565688 MSMO1Q15800 293 aa14.17□□□□□ -0.14
CLN3-218ENST00000565688 ADAMTSL5Q6ZMM2 481 aa14.17□□□□□ -0.14
CLN3-218ENST00000565688 FYTTD1Q96QD9 318 aaKnown RBP14.17□□□□□ -0.14
CLN3-218ENST00000565688 NEURL2Q9BR09 285 aa14.17□□□□□ -0.14
CLN3-218ENST00000565688 YTHDF1Q9BYJ9 559 aaKnown RBP14.17□□□□□ -0.14
CLN3-218ENST00000565688 Q9H521 79 aa14.17□□□□□ -0.14
CLN3-218ENST00000565688 TECRQ9NZ01 308 aaKnown RBP14.17□□□□□ -0.14
CLN3-218ENST00000565688 FBXL7Q9UJT9 491 aa14.17□□□□□ -0.14
CLN3-218ENST00000565688 RYR2Q92736 4967 aa14.17□□□□□ -0.14
CLN3-218ENST00000565688 PPP5D1E7EU14 171 aa14.16□□□□□ -0.14
CLN3-218ENST00000565688 IL6RP08887 468 aaPredicted RBP14.16□□□□□ -0.14
CLN3-218ENST00000565688 ARPC4P59998 168 aa14.16□□□□□ -0.14
CLN3-218ENST00000565688 DEFB114Q30KQ6 69 aa14.16□□□□□ -0.14
CLN3-218ENST00000565688 BEST4Q8NFU0 473 aa14.16□□□□□ -0.14
CLN3-218ENST00000565688 DMRT1Q9Y5R6 373 aa14.16□□□□□ -0.14
CLN3-218ENST00000565688 ETV7Q9Y603 341 aa14.16□□□□□ -0.14
CLN3-218ENST00000565688 CEPT1Q9Y6K0 416 aa14.16□□□□□ -0.14
CLN3-218ENST00000565688 A0A0A6YYH2 397 aa14.15□□□□□ -0.14
CLN3-218ENST00000565688 A6NJ64 397 aa14.15□□□□□ -0.14
CLN3-218ENST00000565688 C2orf70A6NJV1 201 aa14.15□□□□□ -0.14
CLN3-218ENST00000565688 CRYGCP07315 174 aa14.15□□□□□ -0.14
CLN3-218ENST00000565688 FOLR2P14207 255 aa14.15□□□□□ -0.14
CLN3-218ENST00000565688 SDC2P34741 201 aa14.15□□□□□ -0.14
CLN3-218ENST00000565688 BRWD1-AS2P59051 145 aa14.15□□□□□ -0.14
CLN3-218ENST00000565688 RPL8P62917 257 aaKnown RBP14.15□□□□□ -0.14
CLN3-218ENST00000565688 LINC00322Q6ZN03 302 aaPredicted RBP14.15□□□□□ -0.14
CLN3-218ENST00000565688 GPHB5Q86YW7 130 aa14.15□□□□□ -0.14
CLN3-218ENST00000565688 ZBTB34Q8NCN2 500 aa14.15□□□□□ -0.14
CLN3-218ENST00000565688 OR4A5Q8NH83 315 aa14.15□□□□□ -0.14
CLN3-218ENST00000565688 PLEKHA3Q9HB20 300 aa14.15□□□□□ -0.14
CLN3-218ENST00000565688 ZC4H2Q9NQZ6 224 aa14.15□□□□□ -0.14
CLN3-218ENST00000565688 SACSQ9NZJ4 4579 aa14.15□□□□□ -0.14
CLN3-218ENST00000565688 ZNF785A8K8V0 405 aa14.14□□□□□ -0.15
CLN3-218ENST00000565688 OR2C1O95371 312 aa14.14□□□□□ -0.15
CLN3-218ENST00000565688 HIST1H1BP16401 226 aaKnown RBP14.14□□□□□ -0.15
CLN3-218ENST00000565688 PSMB6P28072 239 aa14.14□□□□□ -0.15
CLN3-218ENST00000565688 FCGR2CP31995 323 aa14.14□□□□□ -0.15
CLN3-218ENST00000565688 KLK9Q2XQG4 91 aa14.14□□□□□ -0.15
CLN3-218ENST00000565688 OR13F1Q8NGS4 319 aa14.14□□□□□ -0.15
CLN3-218ENST00000565688 SECTM1Q8WVN6 248 aa14.14□□□□□ -0.15
CLN3-218ENST00000565688 KLK9Q9UKQ9 250 aa14.14□□□□□ -0.15
CLN3-218ENST00000565688 TRAV18A0A075B6X5 111 aa14.13□□□□□ -0.15
CLN3-218ENST00000565688 E7EUB6 86 aa14.13□□□□□ -0.15
CLN3-218ENST00000565688 RBFOX2O43251 390 aaKnown RBP eCLIP14.13□□□□□ -0.15
CLN3-218ENST00000565688 HLA-AP01891 365 aaKnown RBP14.13□□□□□ -0.15
CLN3-218ENST00000565688 DEFA4P12838 97 aa14.13□□□□□ -0.15
CLN3-218ENST00000565688 AREGP15514 252 aa14.13□□□□□ -0.15
CLN3-218ENST00000565688 HLA-GP17693 338 aa14.13□□□□□ -0.15
CLN3-218ENST00000565688 ARL3P36405 182 aa14.13□□□□□ -0.15
CLN3-218ENST00000565688 MXD1Q05195 221 aa14.13□□□□□ -0.15
CLN3-218ENST00000565688 GUCA2BQ16661 112 aa14.13□□□□□ -0.15
CLN3-218ENST00000565688 FAM106AQ4KMX7 169 aa14.13□□□□□ -0.15
CLN3-218ENST00000565688 SSX9Q7RTT3 188 aa14.13□□□□□ -0.15
CLN3-218ENST00000565688 HOGA1Q86XE5 327 aa14.13□□□□□ -0.15
CLN3-218ENST00000565688 IL17DQ8TAD2 202 aa14.13□□□□□ -0.15
CLN3-218ENST00000565688 EEF1AKMT3Q96AZ1 226 aa14.13□□□□□ -0.15
CLN3-218ENST00000565688 FANCD2OSQ96PS1 177 aa14.13□□□□□ -0.15
CLN3-218ENST00000565688 HIPK2Q9H2X6 1198 aa14.13□□□□□ -0.15
CLN3-218ENST00000565688 BET1LQ9NYM9 111 aa14.13□□□□□ -0.15
CLN3-218ENST00000565688 A0A1B0GW64 132 aa14.12□□□□□ -0.15
CLN3-218ENST00000565688 OR11H12B2RN74 326 aa14.12□□□□□ -0.15
CLN3-218ENST00000565688 NDUFB8O95169 186 aa14.12□□□□□ -0.15
CLN3-218ENST00000565688 PPYP01298 95 aa14.12□□□□□ -0.15
CLN3-218ENST00000565688 CD7P09564 240 aa14.12□□□□□ -0.15
CLN3-218ENST00000565688 CTRB1P17538 263 aa14.12□□□□□ -0.15
CLN3-218ENST00000565688 IDNKQ5T6J7 187 aa14.12□□□□□ -0.15
CLN3-218ENST00000565688 CTRB2Q6GPI1 263 aa14.12□□□□□ -0.15
CLN3-218ENST00000565688 OR4A47Q6IF82 309 aa14.12□□□□□ -0.15
CLN3-218ENST00000565688 ZNF773Q6PK81 442 aa14.12□□□□□ -0.15
CLN3-218ENST00000565688 CLEC19AQ6UXS0 136 aa14.12□□□□□ -0.15
CLN3-218ENST00000565688 C19orf35Q6ZS72 473 aa14.12□□□□□ -0.15
CLN3-218ENST00000565688 SPAG16Q8N0X2 631 aa14.12□□□□□ -0.15
CLN3-218ENST00000565688 SLC25A38Q96DW6 304 aa14.12□□□□□ -0.15
CLN3-218ENST00000565688 CCDC140Q96MF4 163 aa14.12□□□□□ -0.15
CLN3-218ENST00000565688 GPHA2Q96T91 129 aa14.12□□□□□ -0.15
CLN3-218ENST00000565688 HRASLSQ9HDD0 168 aa14.12□□□□□ -0.15
CLN3-218ENST00000565688 DIABLOQ9NR28 239 aa14.12□□□□□ -0.15
CLN3-218ENST00000565688 CCL28Q9NRJ3 127 aa14.12□□□□□ -0.15
CLN3-218ENST00000565688 LYSTQ99698 3801 aa14.12□□□□□ -0.15
CLN3-218ENST00000565688 STARD9Q9P2P6 4700 aa14.12□□□□□ -0.15
CLN3-218ENST00000565688 TRBV7-1A0A0A6YYK4 115 aa14.11□□□□□ -0.15
CLN3-218ENST00000565688 TNFSF12O43508 249 aa14.11□□□□□ -0.15
CLN3-218ENST00000565688 TMEM127O75204 238 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms