RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 NKX2-5P52952 324 aaPredicted RBP15.37■□□□□ 0.05
CSPG4P13-201ENST00000565545 RPS16P62249 146 aaKnown RBP15.37■□□□□ 0.05
CSPG4P13-201ENST00000565545 CYB5R2Q6BCY4 276 aa15.37■□□□□ 0.05
CSPG4P13-201ENST00000565545 LHFPL4Q7Z7J7 247 aa15.37■□□□□ 0.05
CSPG4P13-201ENST00000565545 ZNF546Q86UE3 836 aa15.37■□□□□ 0.05
CSPG4P13-201ENST00000565545 VSTM2AQ8TAG5 236 aa15.37■□□□□ 0.05
CSPG4P13-201ENST00000565545 HARBI1Q96MB7 349 aa15.37■□□□□ 0.05
CSPG4P13-201ENST00000565545 MS4A7Q9GZW8 240 aaPredicted RBP15.37■□□□□ 0.05
CSPG4P13-201ENST00000565545 BET1LQ9NYM9 111 aa15.37■□□□□ 0.05
CSPG4P13-201ENST00000565545 MBD2Q9UBB5 411 aa15.37■□□□□ 0.05
CSPG4P13-201ENST00000565545 LSM5Q9Y4Y9 91 aaKnown RBP15.37■□□□□ 0.05
CSPG4P13-201ENST00000565545 HILPDAQ9Y5L2 63 aa15.37■□□□□ 0.05
CSPG4P13-201ENST00000565545 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.37■□□□□ 0.05
CSPG4P13-201ENST00000565545 A0A1W2PRD5 423 aa15.36■□□□□ 0.05
CSPG4P13-201ENST00000565545 A0A1W2PRF3 423 aa15.36■□□□□ 0.05
CSPG4P13-201ENST00000565545 A0A1W2PRM7 423 aa15.36■□□□□ 0.05
CSPG4P13-201ENST00000565545 E5RGE8 158 aa15.36■□□□□ 0.05
CSPG4P13-201ENST00000565545 H0YIZ8 118 aa15.36■□□□□ 0.05
CSPG4P13-201ENST00000565545 WRBO00258 174 aa15.36■□□□□ 0.05
CSPG4P13-201ENST00000565545 MED6O75586 246 aa15.36■□□□□ 0.05
CSPG4P13-201ENST00000565545 TGFAP01135 160 aa15.36■□□□□ 0.05
CSPG4P13-201ENST00000565545 IL6RP08887 468 aaPredicted RBP15.36■□□□□ 0.05
CSPG4P13-201ENST00000565545 PVALBP20472 110 aaPredicted RBP15.36■□□□□ 0.05
CSPG4P13-201ENST00000565545 KRTAP24-1Q3LI83 254 aa15.36■□□□□ 0.05
CSPG4P13-201ENST00000565545 AARDQ4LEZ3 155 aa15.36■□□□□ 0.05
CSPG4P13-201ENST00000565545 GPR157Q5UAW9 335 aa15.36■□□□□ 0.05
CSPG4P13-201ENST00000565545 OR4A47Q6IF82 309 aa15.36■□□□□ 0.05
CSPG4P13-201ENST00000565545 FOXRED2Q8IWF2 684 aa15.36■□□□□ 0.05
CSPG4P13-201ENST00000565545 OR4A16Q8NH70 328 aa15.36■□□□□ 0.05
CSPG4P13-201ENST00000565545 OR4A5Q8NH83 315 aa15.36■□□□□ 0.05
CSPG4P13-201ENST00000565545 NSG2Q9Y328 171 aa15.36■□□□□ 0.05
CSPG4P13-201ENST00000565545 TIMM23O14925 209 aa15.35■□□□□ 0.05
CSPG4P13-201ENST00000565545 C4BPBP20851 252 aa15.35■□□□□ 0.05
CSPG4P13-201ENST00000565545 NUP62P37198 522 aaPredicted RBP15.35■□□□□ 0.05
CSPG4P13-201ENST00000565545 BPIFB3P59826 476 aa15.35■□□□□ 0.05
CSPG4P13-201ENST00000565545 SSX2Q16385 188 aa15.35■□□□□ 0.05
CSPG4P13-201ENST00000565545 IZUMO4Q1ZYL8 232 aa15.35■□□□□ 0.05
CSPG4P13-201ENST00000565545 VMA21Q3ZAQ7 101 aa15.35■□□□□ 0.05
CSPG4P13-201ENST00000565545 CXorf66Q5JRM2 361 aaPredicted RBP15.35■□□□□ 0.05
CSPG4P13-201ENST00000565545 SSX9Q7RTT3 188 aa15.35■□□□□ 0.05
CSPG4P13-201ENST00000565545 ZNF429Q86V71 674 aa15.35■□□□□ 0.05
CSPG4P13-201ENST00000565545 PUSL1Q8N0Z8 303 aaKnown RBP15.35■□□□□ 0.05
CSPG4P13-201ENST00000565545 C9orf62Q8N4C0 152 aa15.35■□□□□ 0.05
CSPG4P13-201ENST00000565545 OR52E5Q8NH55 327 aa15.35■□□□□ 0.05
CSPG4P13-201ENST00000565545 CFHR4Q92496 578 aa15.35■□□□□ 0.05
CSPG4P13-201ENST00000565545 TSNAXQ99598 290 aaKnown RBP15.35■□□□□ 0.05
CSPG4P13-201ENST00000565545 TMEM160Q9NX00 188 aa15.35■□□□□ 0.05
CSPG4P13-201ENST00000565545 TNFSF18Q9UNG2 199 aa15.35■□□□□ 0.05
CSPG4P13-201ENST00000565545 SRRM4A7MD48 611 aaKnown RBP15.34■□□□□ 0.05
CSPG4P13-201ENST00000565545 UPK2O00526 184 aa15.34■□□□□ 0.05
CSPG4P13-201ENST00000565545 ARPC5O15511 151 aa15.34■□□□□ 0.05
CSPG4P13-201ENST00000565545 RBMXL2O75526 392 aaKnown RBP15.34■□□□□ 0.05
CSPG4P13-201ENST00000565545 LY86O95711 162 aa15.34■□□□□ 0.05
CSPG4P13-201ENST00000565545 FGF2P09038 288 aa15.34■□□□□ 0.05
CSPG4P13-201ENST00000565545 OR9G9P0C7N8 305 aa15.34■□□□□ 0.05
CSPG4P13-201ENST00000565545 SAA4P35542 130 aa15.34■□□□□ 0.05
CSPG4P13-201ENST00000565545 UBE2KP61086 200 aa15.34■□□□□ 0.05
CSPG4P13-201ENST00000565545 RELBQ01201 579 aa15.34■□□□□ 0.05
CSPG4P13-201ENST00000565545 ZNF345Q14585 488 aa15.34■□□□□ 0.05
CSPG4P13-201ENST00000565545 ACOT7LQ6ZUV0 252 aa15.34■□□□□ 0.05
CSPG4P13-201ENST00000565545 VKORC1L1Q8N0U8 176 aa15.34■□□□□ 0.05
CSPG4P13-201ENST00000565545 INO80EQ8NBZ0 244 aaPredicted RBP15.34■□□□□ 0.05
CSPG4P13-201ENST00000565545 GRPEL2Q8TAA5 225 aa15.34■□□□□ 0.05
CSPG4P13-201ENST00000565545 DCUN1D4Q92564 292 aa15.34■□□□□ 0.05
CSPG4P13-201ENST00000565545 RAB40CQ96S21 281 aa15.34■□□□□ 0.05
CSPG4P13-201ENST00000565545 C19orf24Q9BVV8 132 aa15.34■□□□□ 0.05
CSPG4P13-201ENST00000565545 FKBP11Q9NYL4 201 aa15.34■□□□□ 0.05
CSPG4P13-201ENST00000565545 OR5AC2Q9NZP5 309 aa15.34■□□□□ 0.05
CSPG4P13-201ENST00000565545 HSPB7Q9UBY9 170 aa15.34■□□□□ 0.05
CSPG4P13-201ENST00000565545 RCL1Q9Y2P8 373 aaKnown RBP15.34■□□□□ 0.05
CSPG4P13-201ENST00000565545 IGHV3-72A0A0B4J1Y9 119 aa15.33■□□□□ 0.04
CSPG4P13-201ENST00000565545 TRAV40A0A0B4J280 105 aa15.33■□□□□ 0.04
CSPG4P13-201ENST00000565545 A0A0D9SG52 128 aa15.33■□□□□ 0.04
CSPG4P13-201ENST00000565545 SYNGR2O43760 224 aa15.33■□□□□ 0.04
CSPG4P13-201ENST00000565545 OR2F2O95006 317 aa15.33■□□□□ 0.04
CSPG4P13-201ENST00000565545 VENTXO95231 258 aa15.33■□□□□ 0.04
CSPG4P13-201ENST00000565545 BRS3P32247 399 aa15.33■□□□□ 0.04
CSPG4P13-201ENST00000565545 POLR2GP62487 172 aaKnown RBP eCLIP15.33■□□□□ 0.04
CSPG4P13-201ENST00000565545 TNFRSF9Q07011 255 aa15.33■□□□□ 0.04
CSPG4P13-201ENST00000565545 OR2F1Q13607 317 aa15.33■□□□□ 0.04
CSPG4P13-201ENST00000565545 LGALSLQ3ZCW2 172 aaPredicted RBP15.33■□□□□ 0.04
CSPG4P13-201ENST00000565545 LAMTOR1Q6IAA8 161 aa15.33■□□□□ 0.04
CSPG4P13-201ENST00000565545 TEX45Q8NA69 505 aa15.33■□□□□ 0.04
CSPG4P13-201ENST00000565545 AJUBAQ96IF1 538 aa15.33■□□□□ 0.04
CSPG4P13-201ENST00000565545 MFFQ9GZY8 342 aa15.33■□□□□ 0.04
CSPG4P13-201ENST00000565545 PRNDQ9UKY0 176 aa15.33■□□□□ 0.04
CSPG4P13-201ENST00000565545 C15orf61A6NNL5 157 aa15.32■□□□□ 0.04
CSPG4P13-201ENST00000565545 L7N2F9 121 aa15.32■□□□□ 0.04
CSPG4P13-201ENST00000565545 GPR137BO60478 399 aa15.32■□□□□ 0.04
CSPG4P13-201ENST00000565545 SPDEFO95238 335 aa15.32■□□□□ 0.04
CSPG4P13-201ENST00000565545 IGLV2-23P01705 113 aa15.32■□□□□ 0.04
CSPG4P13-201ENST00000565545 SAA1P0DJI8 122 aaPredicted RBP15.32■□□□□ 0.04
CSPG4P13-201ENST00000565545 SRD5A1P18405 259 aa15.32■□□□□ 0.04
CSPG4P13-201ENST00000565545 P2RY1P47900 373 aa15.32■□□□□ 0.04
CSPG4P13-201ENST00000565545 VAMP2P63027 116 aa15.32■□□□□ 0.04
CSPG4P13-201ENST00000565545 EBI3Q14213 229 aa15.32■□□□□ 0.04
CSPG4P13-201ENST00000565545 PDLIM3Q53GG5 364 aaPredicted RBP15.32■□□□□ 0.04
CSPG4P13-201ENST00000565545 THNSL2Q86YJ6 484 aa15.32■□□□□ 0.04
CSPG4P13-201ENST00000565545 PIP4P2Q8N4L2 257 aa15.32■□□□□ 0.04
CSPG4P13-201ENST00000565545 OR2T10Q8NGZ9 312 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms