RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 NECAP1Q8NC96 275 aa11.91□□□□□ -0.5
CDH3-204ENST00000565453 OR13F1Q8NGS4 319 aa11.91□□□□□ -0.5
CDH3-204ENST00000565453 SECTM1Q8WVN6 248 aa11.91□□□□□ -0.5
CDH3-204ENST00000565453 YIPF6Q96EC8 236 aa11.91□□□□□ -0.5
CDH3-204ENST00000565453 DIABLOQ9NR28 239 aa11.91□□□□□ -0.5
CDH3-204ENST00000565453 ZNF257Q9Y2Q1 563 aa11.91□□□□□ -0.5
CDH3-204ENST00000565453 NPIPB5A8MRT5 1133 aa11.9□□□□□ -0.5
CDH3-204ENST00000565453 H0Y980 276 aa11.9□□□□□ -0.5
CDH3-204ENST00000565453 TNFSF12O43508 249 aa11.9□□□□□ -0.5
CDH3-204ENST00000565453 OR2J3O76001 311 aa11.9□□□□□ -0.5
CDH3-204ENST00000565453 FCER2P06734 321 aa11.9□□□□□ -0.5
CDH3-204ENST00000565453 MAS1LP35410 378 aa11.9□□□□□ -0.5
CDH3-204ENST00000565453 KIR2DS2P43631 304 aa11.9□□□□□ -0.5
CDH3-204ENST00000565453 TATDN3Q17R31 274 aa11.9□□□□□ -0.5
CDH3-204ENST00000565453 KLK9Q2XQG4 91 aa11.9□□□□□ -0.5
CDH3-204ENST00000565453 ADAMTSL5Q6ZMM2 481 aa11.9□□□□□ -0.5
CDH3-204ENST00000565453 NBEAL2Q6ZNJ1 2754 aa11.9□□□□□ -0.5
CDH3-204ENST00000565453 ZBTB34Q8NCN2 500 aa11.9□□□□□ -0.5
CDH3-204ENST00000565453 FANCD2OSQ96PS1 177 aa11.9□□□□□ -0.5
CDH3-204ENST00000565453 TM2D3Q9BRN9 247 aa11.9□□□□□ -0.5
CDH3-204ENST00000565453 SLC2A9Q9NRM0 540 aa11.9□□□□□ -0.5
CDH3-204ENST00000565453 KLK9Q9UKQ9 250 aa11.9□□□□□ -0.5
CDH3-204ENST00000565453 CGB1A6NKQ9 187 aa11.89□□□□□ -0.51
CDH3-204ENST00000565453 C3orf84H3BNL1 204 aa11.89□□□□□ -0.51
CDH3-204ENST00000565453 RBFOX2O43251 390 aaKnown RBP eCLIP11.89□□□□□ -0.51
CDH3-204ENST00000565453 XRCC3O43542 346 aa11.89□□□□□ -0.51
CDH3-204ENST00000565453 HRASP01112 189 aa11.89□□□□□ -0.51
CDH3-204ENST00000565453 CRYGCP07315 174 aa11.89□□□□□ -0.51
CDH3-204ENST00000565453 MYOD1P15172 320 aa11.89□□□□□ -0.51
CDH3-204ENST00000565453 RPS19P39019 145 aaKnown RBP11.89□□□□□ -0.51
CDH3-204ENST00000565453 CBX5P45973 191 aa11.89□□□□□ -0.51
CDH3-204ENST00000565453 C15orf32Q32M92 178 aa11.89□□□□□ -0.51
CDH3-204ENST00000565453 TIMM50Q3ZCQ8 353 aa11.89□□□□□ -0.51
CDH3-204ENST00000565453 SSX9Q7RTT3 188 aa11.89□□□□□ -0.51
CDH3-204ENST00000565453 SGPP2Q8IWX5 399 aa11.89□□□□□ -0.51
CDH3-204ENST00000565453 SPAG16Q8N0X2 631 aa11.89□□□□□ -0.51
CDH3-204ENST00000565453 OR5AP2Q8NGF4 316 aa11.89□□□□□ -0.51
CDH3-204ENST00000565453 GIMAP1Q8WWP7 306 aa11.89□□□□□ -0.51
CDH3-204ENST00000565453 SLC5A7Q9GZV3 580 aa11.89□□□□□ -0.51
CDH3-204ENST00000565453 BET1LQ9NYM9 111 aa11.89□□□□□ -0.51
CDH3-204ENST00000565453 ANAPC10Q9UM13 185 aa11.89□□□□□ -0.51
CDH3-204ENST00000565453 IZUMO1RA6ND01 250 aa11.88□□□□□ -0.51
CDH3-204ENST00000565453 AREGP15514 252 aa11.88□□□□□ -0.51
CDH3-204ENST00000565453 RPL8P62917 257 aaKnown RBP11.88□□□□□ -0.51
CDH3-204ENST00000565453 POU2AF1Q16633 256 aa11.88□□□□□ -0.51
CDH3-204ENST00000565453 OR4A47Q6IF82 309 aa11.88□□□□□ -0.51
CDH3-204ENST00000565453 ZNF818PQ6ZRF7 136 aa11.88□□□□□ -0.51
CDH3-204ENST00000565453 CROCCP3Q8IVE0 287 aa11.88□□□□□ -0.51
CDH3-204ENST00000565453 Q8N402 240 aa11.88□□□□□ -0.51
CDH3-204ENST00000565453 FYTTD1Q96QD9 318 aaKnown RBP11.88□□□□□ -0.51
CDH3-204ENST00000565453 ZMAT4Q9H898 229 aa11.88□□□□□ -0.51
CDH3-204ENST00000565453 PEMTQ9UBM1 199 aa11.88□□□□□ -0.51
CDH3-204ENST00000565453 MEIS3P1A6NDR6 274 aa11.87□□□□□ -0.51
CDH3-204ENST00000565453 PPP5D1E7EU14 171 aa11.87□□□□□ -0.51
CDH3-204ENST00000565453 SULT1C2O00338 296 aa11.87□□□□□ -0.51
CDH3-204ENST00000565453 AIREO43918 545 aa11.87□□□□□ -0.51
CDH3-204ENST00000565453 NDUFB8O95169 186 aa11.87□□□□□ -0.51
CDH3-204ENST00000565453 CTRB1P17538 263 aa11.87□□□□□ -0.51
CDH3-204ENST00000565453 HLA-GP17693 338 aa11.87□□□□□ -0.51
CDH3-204ENST00000565453 PSMB6P28072 239 aa11.87□□□□□ -0.51
CDH3-204ENST00000565453 FXYD4P59646 89 aa11.87□□□□□ -0.51
CDH3-204ENST00000565453 FAM209BQ5JX69 171 aa11.87□□□□□ -0.51
CDH3-204ENST00000565453 UBE2NLQ5JXB2 153 aa11.87□□□□□ -0.51
CDH3-204ENST00000565453 CTRB2Q6GPI1 263 aa11.87□□□□□ -0.51
CDH3-204ENST00000565453 LCN12Q6JVE5 192 aa11.87□□□□□ -0.51
CDH3-204ENST00000565453 OR2K2Q8NGT1 345 aa11.87□□□□□ -0.51
CDH3-204ENST00000565453 OR4A5Q8NH83 315 aa11.87□□□□□ -0.51
CDH3-204ENST00000565453 S100A16Q96FQ6 103 aaKnown RBP11.87□□□□□ -0.51
CDH3-204ENST00000565453 CCDC140Q96MF4 163 aa11.87□□□□□ -0.51
CDH3-204ENST00000565453 FBXL7Q9UJT9 491 aa11.87□□□□□ -0.51
CDH3-204ENST00000565453 RYR3Q15413 4870 aa11.87□□□□□ -0.51
CDH3-204ENST00000565453 DNAH7Q8WXX0 4024 aa11.87□□□□□ -0.51
CDH3-204ENST00000565453 HPRT1P00492 218 aa11.86□□□□□ -0.51
CDH3-204ENST00000565453 NAT1P18440 290 aa11.86□□□□□ -0.51
CDH3-204ENST00000565453 TAS2R31P59538 309 aa11.86□□□□□ -0.51
CDH3-204ENST00000565453 TAS2R20P59543 309 aa11.86□□□□□ -0.51
CDH3-204ENST00000565453 LSM3P62310 102 aaKnown RBP11.86□□□□□ -0.51
CDH3-204ENST00000565453 CATR1Q13166 79 aa11.86□□□□□ -0.51
CDH3-204ENST00000565453 DHRS11Q6UWP2 260 aa11.86□□□□□ -0.51
CDH3-204ENST00000565453 TSPAN14Q8NG11 270 aa11.86□□□□□ -0.51
CDH3-204ENST00000565453 MUC7Q8TAX7 377 aa11.86□□□□□ -0.51
CDH3-204ENST00000565453 KCTD12Q96CX2 325 aaKnown RBP11.86□□□□□ -0.51
CDH3-204ENST00000565453 A0A087WXM4 84 aa11.85□□□□□ -0.51
CDH3-204ENST00000565453 TRAV3A0A0B4J244 114 aa11.85□□□□□ -0.51
CDH3-204ENST00000565453 DPPA5A6NC42 116 aa11.85□□□□□ -0.51
CDH3-204ENST00000565453 UPK2O00526 184 aa11.85□□□□□ -0.51
CDH3-204ENST00000565453 GGCTO75223 188 aaKnown RBP11.85□□□□□ -0.51
CDH3-204ENST00000565453 HLA-AP01891 365 aaKnown RBP11.85□□□□□ -0.51
CDH3-204ENST00000565453 NQO2P16083 231 aa11.85□□□□□ -0.51
CDH3-204ENST00000565453 EDN2P20800 178 aa11.85□□□□□ -0.51
CDH3-204ENST00000565453 GNRHRP30968 328 aa11.85□□□□□ -0.51
CDH3-204ENST00000565453 OR2B8PP59922 312 aa11.85□□□□□ -0.51
CDH3-204ENST00000565453 TMEM17Q86X19 198 aa11.85□□□□□ -0.51
CDH3-204ENST00000565453 SAMD12Q8N8I0 201 aa11.85□□□□□ -0.51
CDH3-204ENST00000565453 AIFM2Q9BRQ8 373 aa11.85□□□□□ -0.51
CDH3-204ENST00000565453 IFT46Q9NQC8 304 aa11.85□□□□□ -0.51
CDH3-204ENST00000565453 EHFQ9NZC4 300 aa11.85□□□□□ -0.51
CDH3-204ENST00000565453 IGLV11-55A0A075B6I3 123 aa11.84□□□□□ -0.51
CDH3-204ENST00000565453 IGLC7A0M8Q6 106 aa11.84□□□□□ -0.51
CDH3-204ENST00000565453 C2orf70A6NJV1 201 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms