RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 KCNIP4Q6PIL6 250 aa12.82□□□□□ -0.36
GTF3C1-205ENST00000564747 ABHD12Q8N2K0 398 aa12.82□□□□□ -0.36
GTF3C1-205ENST00000564747 CISD2Q8N5K1 135 aaKnown RBP12.82□□□□□ -0.36
GTF3C1-205ENST00000564747 OR2Z1Q8NG97 314 aa12.82□□□□□ -0.36
GTF3C1-205ENST00000564747 INTS1Q8N201 2190 aaKnown RBP12.82□□□□□ -0.36
GTF3C1-205ENST00000564747 SVILO95425 2214 aa12.82□□□□□ -0.36
GTF3C1-205ENST00000564747 PDE6DO43924 150 aa12.82□□□□□ -0.36
GTF3C1-205ENST00000564747 C1QTNF9P0C862 333 aa12.82□□□□□ -0.36
GTF3C1-205ENST00000564747 COL8A2P25067 703 aa12.82□□□□□ -0.36
GTF3C1-205ENST00000564747 CADP27708 2225 aa12.82□□□□□ -0.36
GTF3C1-205ENST00000564747 TET2Q6N021 2002 aaPredicted RBP12.82□□□□□ -0.36
GTF3C1-205ENST00000564747 IGHV3OR15-7A0A075B7D8 119 aa12.81□□□□□ -0.36
GTF3C1-205ENST00000564747 IGHV2OR16-5A0A0B4J2B6 119 aa12.81□□□□□ -0.36
GTF3C1-205ENST00000564747 TYMSP04818 313 aa12.81□□□□□ -0.36
GTF3C1-205ENST00000564747 OR4A8P0C604 315 aa12.81□□□□□ -0.36
GTF3C1-205ENST00000564747 UTF1Q5T230 341 aa12.81□□□□□ -0.36
GTF3C1-205ENST00000564747 FDCSPQ8NFU4 85 aa12.81□□□□□ -0.36
GTF3C1-205ENST00000564747 MS4A5Q9H3V2 200 aa12.81□□□□□ -0.36
GTF3C1-205ENST00000564747 DUSP13Q9UII6 198 aa12.81□□□□□ -0.36
GTF3C1-205ENST00000564747 IGHV1-18A0A0C4DH31 117 aa12.81□□□□□ -0.36
GTF3C1-205ENST00000564747 ARL14EPLP0DKL9 152 aa12.81□□□□□ -0.36
GTF3C1-205ENST00000564747 IL3RAP26951 378 aa12.81□□□□□ -0.36
GTF3C1-205ENST00000564747 CNN1P51911 297 aaKnown RBP12.81□□□□□ -0.36
GTF3C1-205ENST00000564747 AARDQ4LEZ3 155 aa12.81□□□□□ -0.36
GTF3C1-205ENST00000564747 MIC13Q5XKP0 118 aa12.81□□□□□ -0.36
GTF3C1-205ENST00000564747 ALKBH2Q6NS38 261 aa12.81□□□□□ -0.36
GTF3C1-205ENST00000564747 C1orf229Q6ZS94 237 aaPredicted RBP12.81□□□□□ -0.36
GTF3C1-205ENST00000564747 LRP11Q86VZ4 500 aa12.81□□□□□ -0.36
GTF3C1-205ENST00000564747 FAM90A1Q86YD7 464 aa12.81□□□□□ -0.36
GTF3C1-205ENST00000564747 ZNRF1Q8ND25 227 aa12.81□□□□□ -0.36
GTF3C1-205ENST00000564747 RAB1CQ92928 201 aa12.81□□□□□ -0.36
GTF3C1-205ENST00000564747 MGST2Q99735 147 aa12.81□□□□□ -0.36
GTF3C1-205ENST00000564747 LAMA5O15230 3695 aa12.81□□□□□ -0.36
GTF3C1-205ENST00000564747 VDAC2P45880 294 aaPredicted RBP12.81□□□□□ -0.36
GTF3C1-205ENST00000564747 SPRNQ5BIV9 151 aa12.81□□□□□ -0.36
GTF3C1-205ENST00000564747 TRBV20OR9-2A0A075B6H5 130 aa12.8□□□□□ -0.36
GTF3C1-205ENST00000564747 GFRA3O60609 400 aa12.8□□□□□ -0.36
GTF3C1-205ENST00000564747 RELBQ01201 579 aa12.8□□□□□ -0.36
GTF3C1-205ENST00000564747 MSMPQ1L6U9 139 aa12.8□□□□□ -0.36
GTF3C1-205ENST00000564747 PDLIM3Q53GG5 364 aaPredicted RBP12.8□□□□□ -0.36
GTF3C1-205ENST00000564747 TRAT1Q6PIZ9 186 aa12.8□□□□□ -0.36
GTF3C1-205ENST00000564747 LEAP2Q969E1 77 aa12.8□□□□□ -0.36
GTF3C1-205ENST00000564747 OPN3Q9H1Y3 402 aaPredicted RBP12.8□□□□□ -0.36
GTF3C1-205ENST00000564747 KCNIP2Q9NS61 270 aa12.8□□□□□ -0.36
GTF3C1-205ENST00000564747 A0A0U1RQK1 487 aa12.8□□□□□ -0.36
GTF3C1-205ENST00000564747 ZNF320A2RRD8 509 aa12.8□□□□□ -0.36
GTF3C1-205ENST00000564747 PRSS46E5RG02 174 aa12.8□□□□□ -0.36
GTF3C1-205ENST00000564747 AQP7O14520 342 aa12.8□□□□□ -0.36
GTF3C1-205ENST00000564747 TMPRSS2O15393 492 aa12.8□□□□□ -0.36
GTF3C1-205ENST00000564747 RBFOX2O43251 390 aaKnown RBP eCLIP12.8□□□□□ -0.36
GTF3C1-205ENST00000564747 OPRK1P41145 380 aa12.8□□□□□ -0.36
GTF3C1-205ENST00000564747 LOXL3P58215 753 aa12.8□□□□□ -0.36
GTF3C1-205ENST00000564747 MBNL2Q5VZF2 373 aaKnown RBP12.8□□□□□ -0.36
GTF3C1-205ENST00000564747 GBGT1Q8N5D6 347 aa12.8□□□□□ -0.36
GTF3C1-205ENST00000564747 C1orf162Q8NEQ5 155 aaPredicted RBP12.8□□□□□ -0.36
GTF3C1-205ENST00000564747 WFIKKN1Q96NZ8 548 aa12.8□□□□□ -0.36
GTF3C1-205ENST00000564747 PXMP4Q9Y6I8 212 aa12.8□□□□□ -0.36
GTF3C1-205ENST00000564747 SCGB1D1O95968 90 aa12.79□□□□□ -0.36
GTF3C1-205ENST00000564747 IGLV1-44P01699 117 aa12.79□□□□□ -0.36
GTF3C1-205ENST00000564747 LCN2P80188 198 aa12.79□□□□□ -0.36
GTF3C1-205ENST00000564747 TMEM249Q2WGJ8 235 aa12.79□□□□□ -0.36
GTF3C1-205ENST00000564747 SSMEM1Q8WWF3 244 aa12.79□□□□□ -0.36
GTF3C1-205ENST00000564747 C1orf159Q96HA4 380 aa12.79□□□□□ -0.36
GTF3C1-205ENST00000564747 ATG101Q9BSB4 218 aa12.79□□□□□ -0.36
GTF3C1-205ENST00000564747 GGTLC1Q9BX51 225 aa12.79□□□□□ -0.36
GTF3C1-205ENST00000564747 JPT1Q9UK76 154 aa12.79□□□□□ -0.36
GTF3C1-205ENST00000564747 SMG1Q96Q15 3661 aaKnown RBP12.79□□□□□ -0.36
GTF3C1-205ENST00000564747 SRRM5B3KS81 715 aa12.79□□□□□ -0.36
GTF3C1-205ENST00000564747 YPEL1O60688 119 aa12.79□□□□□ -0.36
GTF3C1-205ENST00000564747 MPDU1O75352 247 aa12.79□□□□□ -0.36
GTF3C1-205ENST00000564747 HNF1AP20823 631 aa12.79□□□□□ -0.36
GTF3C1-205ENST00000564747 RPP30P78346 268 aaKnown RBP12.79□□□□□ -0.36
GTF3C1-205ENST00000564747 YPEL2Q96QA6 119 aa12.79□□□□□ -0.36
GTF3C1-205ENST00000564747 IFI27L2Q9H2X8 130 aa12.79□□□□□ -0.36
GTF3C1-205ENST00000564747 TMEM140Q9NV12 185 aa12.79□□□□□ -0.36
GTF3C1-205ENST00000564747 FKBP11Q9NYL4 201 aa12.79□□□□□ -0.36
GTF3C1-205ENST00000564747 ICE1Q9Y2F5 2266 aa12.78□□□□□ -0.36
GTF3C1-205ENST00000564747 FAM90A9PA6NNJ1 464 aa12.78□□□□□ -0.36
GTF3C1-205ENST00000564747 SOX15O60248 233 aa12.78□□□□□ -0.36
GTF3C1-205ENST00000564747 RPL15P61313 204 aaKnown RBP12.78□□□□□ -0.36
GTF3C1-205ENST00000564747 ERVK-16P61578 105 aa12.78□□□□□ -0.36
GTF3C1-205ENST00000564747 TEX38Q6PEX7 206 aa12.78□□□□□ -0.36
GTF3C1-205ENST00000564747 TMEM144Q7Z5S9 345 aa12.78□□□□□ -0.36
GTF3C1-205ENST00000564747 GCSAMQ8N6F7 178 aa12.78□□□□□ -0.36
GTF3C1-205ENST00000564747 S1PR3Q99500 378 aa12.78□□□□□ -0.36
GTF3C1-205ENST00000564747 SNHG12Q9BXW3 62 aa12.78□□□□□ -0.36
GTF3C1-205ENST00000564747 CBLN4Q9NTU7 201 aa12.78□□□□□ -0.36
GTF3C1-205ENST00000564747 CACNA1GO43497 2377 aa12.78□□□□□ -0.36
GTF3C1-205ENST00000564747 STAG3L2P0CL84 134 aa12.78□□□□□ -0.36
GTF3C1-205ENST00000564747 STAG3L3P0CL85 134 aa12.78□□□□□ -0.36
GTF3C1-205ENST00000564747 PLSCR4Q9NRQ2 329 aa12.78□□□□□ -0.36
GTF3C1-205ENST00000564747 A0A1B0GUS0 222 aa12.77□□□□□ -0.36
GTF3C1-205ENST00000564747 SCO2A0A1W2PP80 73 aa12.77□□□□□ -0.36
GTF3C1-205ENST00000564747 MGST3O14880 152 aa12.77□□□□□ -0.36
GTF3C1-205ENST00000564747 CD99P14209 185 aa12.77□□□□□ -0.36
GTF3C1-205ENST00000564747 OR52E5Q8NH55 327 aa12.77□□□□□ -0.36
GTF3C1-205ENST00000564747 SGMS2Q8NHU3 365 aa12.77□□□□□ -0.36
GTF3C1-205ENST00000564747 SFRP2Q96HF1 295 aa12.77□□□□□ -0.36
GTF3C1-205ENST00000564747 ZNF71Q9NQZ8 489 aaPredicted RBP12.77□□□□□ -0.36
GTF3C1-205ENST00000564747 TUBG2Q9NRH3 451 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms