RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 ETV3LQ6ZN32 361 aa5.99□□□□□ -1.45
HERPUD1-209ENST00000564678 OR52E5Q8NH55 327 aa5.99□□□□□ -1.45
HERPUD1-209ENST00000564678 DTD1Q8TEA8 209 aa5.99□□□□□ -1.45
HERPUD1-209ENST00000564678 MBD3L1Q8WWY6 194 aa5.99□□□□□ -1.45
HERPUD1-209ENST00000564678 SNRNP40Q96DI7 357 aaKnown RBP5.99□□□□□ -1.45
HERPUD1-209ENST00000564678 DCTN5Q9BTE1 182 aa5.99□□□□□ -1.45
HERPUD1-209ENST00000564678 ELOVL1Q9BW60 279 aa5.99□□□□□ -1.45
HERPUD1-209ENST00000564678 TUBA4BQ9H853 241 aa5.99□□□□□ -1.45
HERPUD1-209ENST00000564678 SMCO4Q9NRQ5 59 aa5.99□□□□□ -1.45
HERPUD1-209ENST00000564678 SPENQ96T58 3664 aaKnown RBP5.98□□□□□ -1.45
HERPUD1-209ENST00000564678 DSCAML1Q8TD84 2053 aa5.98□□□□□ -1.45
HERPUD1-209ENST00000564678 DIDO1Q9BTC0 2240 aaKnown RBP5.98□□□□□ -1.45
HERPUD1-209ENST00000564678 DPRXA6NFQ7 191 aa5.98□□□□□ -1.45
HERPUD1-209ENST00000564678 ZNF729A6NN14 1252 aaPredicted RBP5.98□□□□□ -1.45
HERPUD1-209ENST00000564678 HSPB1P04792 205 aaKnown RBP5.98□□□□□ -1.45
HERPUD1-209ENST00000564678 UCNP55089 124 aa5.98□□□□□ -1.45
HERPUD1-209ENST00000564678 GNB2P62879 340 aa5.98□□□□□ -1.45
HERPUD1-209ENST00000564678 SLC38A11Q08AI6 406 aa5.98□□□□□ -1.45
HERPUD1-209ENST00000564678 C17orf58Q2M2W7 97 aa5.98□□□□□ -1.45
HERPUD1-209ENST00000564678 VWC2Q2TAL6 325 aa5.98□□□□□ -1.45
HERPUD1-209ENST00000564678 PDLIM3Q53GG5 364 aaPredicted RBP5.98□□□□□ -1.45
HERPUD1-209ENST00000564678 KHDC3LQ587J8 217 aa5.98□□□□□ -1.45
HERPUD1-209ENST00000564678 SERTAD4-AS1Q5TG53 156 aa5.98□□□□□ -1.45
HERPUD1-209ENST00000564678 NCR3LG1Q68D85 454 aa5.98□□□□□ -1.45
HERPUD1-209ENST00000564678 FAM53AQ6NSI3 398 aaPredicted RBP5.98□□□□□ -1.45
HERPUD1-209ENST00000564678 BTNL3Q6UXE8 466 aa5.98□□□□□ -1.45
HERPUD1-209ENST00000564678 HAPLN4Q86UW8 402 aa5.98□□□□□ -1.45
HERPUD1-209ENST00000564678 C1orf87Q8N0U7 546 aa5.98□□□□□ -1.45
HERPUD1-209ENST00000564678 OR10P1Q8NGE3 313 aa5.98□□□□□ -1.45
HERPUD1-209ENST00000564678 OR10A7Q8NGE5 316 aa5.98□□□□□ -1.45
HERPUD1-209ENST00000564678 RND1Q92730 232 aa5.98□□□□□ -1.45
HERPUD1-209ENST00000564678 TAF15Q92804 592 aaKnown RBP eCLIP5.98□□□□□ -1.45
HERPUD1-209ENST00000564678 R3HDM4Q96D70 268 aa5.98□□□□□ -1.45
HERPUD1-209ENST00000564678 ADTRPQ96IZ2 230 aa5.98□□□□□ -1.45
HERPUD1-209ENST00000564678 OR4C12Q96R67 309 aa5.98□□□□□ -1.45
HERPUD1-209ENST00000564678 ABHD14AQ9BUJ0 271 aa5.98□□□□□ -1.45
HERPUD1-209ENST00000564678 FBXO7Q9Y3I1 522 aa5.98□□□□□ -1.45
HERPUD1-209ENST00000564678 DYSFO75923 2080 aa5.98□□□□□ -1.45
HERPUD1-209ENST00000564678 TRAV38-1A0A0B4J264 116 aa5.97□□□□□ -1.45
HERPUD1-209ENST00000564678 PMS2P5A8MQ11 134 aa5.97□□□□□ -1.45
HERPUD1-209ENST00000564678 SOX15O60248 233 aa5.97□□□□□ -1.45
HERPUD1-209ENST00000564678 MBP02144 154 aa5.97□□□□□ -1.45
HERPUD1-209ENST00000564678 OR4A8P0C604 315 aa5.97□□□□□ -1.45
HERPUD1-209ENST00000564678 NQO2P16083 231 aa5.97□□□□□ -1.45
HERPUD1-209ENST00000564678 OR2B11Q5JQS5 317 aa5.97□□□□□ -1.45
HERPUD1-209ENST00000564678 SOHLH1Q5JUK2 328 aa5.97□□□□□ -1.45
HERPUD1-209ENST00000564678 ZNF506Q5JVG8 444 aa5.97□□□□□ -1.45
HERPUD1-209ENST00000564678 FAM122CQ6P4D5 195 aa5.97□□□□□ -1.45
HERPUD1-209ENST00000564678 TMEM88Q6PEY1 159 aa5.97□□□□□ -1.45
HERPUD1-209ENST00000564678 OR10G4Q8NGN3 311 aa5.97□□□□□ -1.45
HERPUD1-209ENST00000564678 SFT2D1Q8WV19 159 aa5.97□□□□□ -1.45
HERPUD1-209ENST00000564678 GAFA1Q96PS6 74 aa5.97□□□□□ -1.45
HERPUD1-209ENST00000564678 S1PR3Q99500 378 aa5.97□□□□□ -1.45
HERPUD1-209ENST00000564678 IFI27L2Q9H2X8 130 aa5.97□□□□□ -1.45
HERPUD1-209ENST00000564678 RPRMQ9NS64 109 aa5.97□□□□□ -1.45
HERPUD1-209ENST00000564678 RFNGQ9Y644 331 aa5.97□□□□□ -1.45
HERPUD1-209ENST00000564678 PLCE1Q9P212 2302 aa5.97□□□□□ -1.45
HERPUD1-209ENST00000564678 ICE1Q9Y2F5 2266 aa5.97□□□□□ -1.45
HERPUD1-209ENST00000564678 TANC2Q9HCD6 1990 aa5.97□□□□□ -1.45
HERPUD1-209ENST00000564678 M0R1X1 148 aa5.97□□□□□ -1.45
HERPUD1-209ENST00000564678 ZG16O60844 167 aa5.97□□□□□ -1.45
HERPUD1-209ENST00000564678 FCGR3BO75015 233 aa5.97□□□□□ -1.45
HERPUD1-209ENST00000564678 NDUFS6O75380 124 aaKnown RBP5.97□□□□□ -1.45
HERPUD1-209ENST00000564678 RBMXL2O75526 392 aaKnown RBP5.97□□□□□ -1.45
HERPUD1-209ENST00000564678 CYB5R3P00387 301 aaPredicted RBP5.97□□□□□ -1.45
HERPUD1-209ENST00000564678 THBS3P49746 956 aa5.97□□□□□ -1.45
HERPUD1-209ENST00000564678 TMPRSS3P57727 454 aa5.97□□□□□ -1.45
HERPUD1-209ENST00000564678 SPCS3P61009 180 aa5.97□□□□□ -1.45
HERPUD1-209ENST00000564678 ERVK-16P61578 105 aa5.97□□□□□ -1.45
HERPUD1-209ENST00000564678 CCL20P78556 96 aa5.97□□□□□ -1.45
HERPUD1-209ENST00000564678 FLI1Q01543 452 aaPredicted RBP5.97□□□□□ -1.45
HERPUD1-209ENST00000564678 MEF2CQ06413 473 aaPredicted RBP5.97□□□□□ -1.45
HERPUD1-209ENST00000564678 BSPH1Q075Z2 132 aa5.97□□□□□ -1.45
HERPUD1-209ENST00000564678 RHEBQ15382 184 aa5.97□□□□□ -1.45
HERPUD1-209ENST00000564678 LTC4SQ16873 150 aa5.97□□□□□ -1.45
HERPUD1-209ENST00000564678 ZNF429Q86V71 674 aa5.97□□□□□ -1.45
HERPUD1-209ENST00000564678 C15orf54Q8N8G6 183 aa5.97□□□□□ -1.45
HERPUD1-209ENST00000564678 DDB2Q92466 427 aa5.97□□□□□ -1.45
HERPUD1-209ENST00000564678 RSG1Q9BU20 258 aa5.97□□□□□ -1.45
HERPUD1-209ENST00000564678 TMEM147Q9BVK8 224 aa5.97□□□□□ -1.45
HERPUD1-209ENST00000564678 ESRP2Q9H6T0 727 aaKnown RBP5.97□□□□□ -1.45
HERPUD1-209ENST00000564678 IDI2-AS1Q9NZ38 188 aa5.97□□□□□ -1.45
HERPUD1-209ENST00000564678 APC2O95996 2303 aa5.96□□□□□ -1.45
HERPUD1-209ENST00000564678 hADV38S2A0JD32 116 aa5.96□□□□□ -1.46
HERPUD1-209ENST00000564678 NKX6-3A6NJ46 265 aa5.96□□□□□ -1.46
HERPUD1-209ENST00000564678 CEBPZOSA8MTT3 80 aa5.96□□□□□ -1.46
HERPUD1-209ENST00000564678 TMEM41BQ5BJD5 291 aa5.96□□□□□ -1.46
HERPUD1-209ENST00000564678 CT45A1Q5HYN5 189 aa5.96□□□□□ -1.46
HERPUD1-209ENST00000564678 FAM201AQ5SY85 155 aa5.96□□□□□ -1.46
HERPUD1-209ENST00000564678 CBLN2Q8IUK8 224 aa5.96□□□□□ -1.46
HERPUD1-209ENST00000564678 OR4A16Q8NH70 328 aa5.96□□□□□ -1.46
HERPUD1-209ENST00000564678 OR4S2Q8NH73 311 aa5.96□□□□□ -1.46
HERPUD1-209ENST00000564678 CLDND2Q8NHS1 167 aa5.96□□□□□ -1.46
HERPUD1-209ENST00000564678 CT45A3Q8NHU0 189 aa5.96□□□□□ -1.46
HERPUD1-209ENST00000564678 RARRES2Q99969 163 aa5.96□□□□□ -1.46
HERPUD1-209ENST00000564678 ZNF251Q9BRH9 671 aa5.96□□□□□ -1.46
HERPUD1-209ENST00000564678 GGACTQ9BVM4 153 aa5.96□□□□□ -1.46
HERPUD1-209ENST00000564678 SAP30LQ9HAJ7 183 aa5.96□□□□□ -1.46
HERPUD1-209ENST00000564678 LINC00312Q9Y6C7 94 aa5.96□□□□□ -1.46
HERPUD1-209ENST00000564678 DOCK11Q5JSL3 2073 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms